RNA–Protein interactions for RNA: ENST00000488203.1

CIT-205, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 2

Gene CIT, Length 2,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-205ENST00000488203 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
CIT-205ENST00000488203 ZFYVE16Q7Z3T8 1539 aa13.47□□□□□ -0.25
CIT-205ENST00000488203 SPATA31E1Q6ZUB1 1445 aa13.46□□□□□ -0.25
CIT-205ENST00000488203 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.26
CIT-205ENST00000488203 RTEL1-TNFRSF6BF6WH68 1400 aa13.45□□□□□ -0.26
CIT-205ENST00000488203 CCDC144AA2RUR9 1427 aa13.45□□□□□ -0.26
CIT-205ENST00000488203 IQGAP3Q86VI3 1631 aa13.44□□□□□ -0.26
CIT-205ENST00000488203 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
CIT-205ENST00000488203 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
CIT-205ENST00000488203 MAGI2Q86UL8 1455 aa13.43□□□□□ -0.26
CIT-205ENST00000488203 USP47Q96K76 1375 aa13.43□□□□□ -0.26
CIT-205ENST00000488203 KIF3BO15066 747 aa13.43□□□□□ -0.26
CIT-205ENST00000488203 ATP7AQ04656 1500 aa13.42□□□□□ -0.26
CIT-205ENST00000488203 UHRF1BP1Q6BDS2 1440 aa13.42□□□□□ -0.26
CIT-205ENST00000488203 KIF7Q2M1P5 1343 aa13.42□□□□□ -0.26
CIT-205ENST00000488203 CARD11Q9BXL7 1154 aa13.42□□□□□ -0.26
CIT-205ENST00000488203 POLR3GLQ9BT43 218 aa13.41□□□□□ -0.26
CIT-205ENST00000488203 INO80Q9ULG1 1556 aaPredicted RBP13.4□□□□□ -0.26
CIT-205ENST00000488203 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
CIT-205ENST00000488203 RALGAPBQ86X10 1494 aa13.39□□□□□ -0.27
CIT-205ENST00000488203 DHX29Q7Z478 1369 aaKnown RBP13.38□□□□□ -0.27
CIT-205ENST00000488203 CNTLNQ9NXG0 1405 aa13.38□□□□□ -0.27
CIT-205ENST00000488203 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
CIT-205ENST00000488203 A2MP01023 1474 aa13.37□□□□□ -0.27
CIT-205ENST00000488203 ST20-MTHFSA0A0A6YYL1 179 aa13.37□□□□□ -0.27
CIT-205ENST00000488203 RAPGEF3O95398 923 aa13.37□□□□□ -0.27
CIT-205ENST00000488203 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
CIT-205ENST00000488203 KDM5CP41229 1560 aa13.36□□□□□ -0.27
CIT-205ENST00000488203 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
CIT-205ENST00000488203 PRAG1Q86YV5 1406 aa13.35□□□□□ -0.27
CIT-205ENST00000488203 ZNF518AQ6AHZ1 1483 aa13.35□□□□□ -0.27
CIT-205ENST00000488203 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
CIT-205ENST00000488203 ATP10AO60312 1499 aa13.35□□□□□ -0.27
CIT-205ENST00000488203 KANK1Q14678 1352 aa13.35□□□□□ -0.27
CIT-205ENST00000488203 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
CIT-205ENST00000488203 E9PCH4 1651 aa13.34□□□□□ -0.27
CIT-205ENST00000488203 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
CIT-205ENST00000488203 POGZQ7Z3K3 1410 aa13.34□□□□□ -0.27
CIT-205ENST00000488203 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
CIT-205ENST00000488203 DEPDC5O75140 1603 aa13.33□□□□□ -0.28
CIT-205ENST00000488203 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
CIT-205ENST00000488203 RIMBP3CA6NJZ7 1639 aa13.32□□□□□ -0.28
CIT-205ENST00000488203 RIMBP3BA6NNM3 1639 aa13.32□□□□□ -0.28
CIT-205ENST00000488203 RIMBP3Q9UFD9 1639 aa13.32□□□□□ -0.28
CIT-205ENST00000488203 GGT6Q6P531 493 aa13.31□□□□□ -0.28
CIT-205ENST00000488203 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
CIT-205ENST00000488203 MROH1Q8NDA8 1641 aa13.3□□□□□ -0.28
CIT-205ENST00000488203 PTPRTO14522 1441 aa13.3□□□□□ -0.28
CIT-205ENST00000488203 VWDEQ8N2E2 1590 aa13.3□□□□□ -0.28
CIT-205ENST00000488203 TRPM1Q7Z4N2 1603 aa13.29□□□□□ -0.28
CIT-205ENST00000488203 CFAP74Q9C0B2 1584 aa13.29□□□□□ -0.28
CIT-205ENST00000488203 TRPM2O94759 1503 aa13.28□□□□□ -0.28
CIT-205ENST00000488203 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
CIT-205ENST00000488203 TET3O43151 1660 aa13.28□□□□□ -0.28
CIT-205ENST00000488203 PRDM15P57071 1507 aaPredicted RBP13.28□□□□□ -0.28
CIT-205ENST00000488203 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
CIT-205ENST00000488203 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
CIT-205ENST00000488203 EIF2AK4Q9P2K8 1649 aaKnown RBP13.27□□□□□ -0.28
CIT-205ENST00000488203 UGGT1Q9NYU2 1555 aa13.27□□□□□ -0.29
CIT-205ENST00000488203 NEO1Q92859 1461 aa13.27□□□□□ -0.29
CIT-205ENST00000488203 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.29
CIT-205ENST00000488203 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
CIT-205ENST00000488203 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
CIT-205ENST00000488203 HECW2Q9P2P5 1572 aa13.26□□□□□ -0.29
CIT-205ENST00000488203 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
CIT-205ENST00000488203 ARID4BQ4LE39 1312 aaPredicted RBP13.25□□□□□ -0.29
CIT-205ENST00000488203 ABCA6Q8N139 1617 aa13.24□□□□□ -0.29
CIT-205ENST00000488203 WASHC2CQ9Y4E1 1318 aa13.23□□□□□ -0.29
CIT-205ENST00000488203 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
CIT-205ENST00000488203 MAP3K4Q9Y6R4 1608 aa13.23□□□□□ -0.29
CIT-205ENST00000488203 PPRC1Q5VV67 1664 aaKnown RBP13.23□□□□□ -0.29
CIT-205ENST00000488203 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
CIT-205ENST00000488203 YEATS2Q9ULM3 1422 aa13.22□□□□□ -0.29
CIT-205ENST00000488203 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
CIT-205ENST00000488203 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
CIT-205ENST00000488203 FAM9BQ8IZU0 186 aa13.22□□□□□ -0.29
CIT-205ENST00000488203 TESK2Q96S53 571 aa13.22□□□□□ -0.29
CIT-205ENST00000488203 CEP152O94986 1710 aa13.22□□□□□ -0.29
CIT-205ENST00000488203 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.3
CIT-205ENST00000488203 DISP3Q9P2K9 1392 aa13.21□□□□□ -0.3
CIT-205ENST00000488203 NPATQ14207 1427 aa13.2□□□□□ -0.3
CIT-205ENST00000488203 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
CIT-205ENST00000488203 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
CIT-205ENST00000488203 ADGRF5Q8IZF2 1346 aa13.19□□□□□ -0.3
CIT-205ENST00000488203 GLI2P10070 1586 aa13.19□□□□□ -0.3
CIT-205ENST00000488203 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
CIT-205ENST00000488203 CFAP70Q5T0N1 1121 aa13.18□□□□□ -0.3
CIT-205ENST00000488203 RICTORQ6R327 1708 aa13.18□□□□□ -0.3
CIT-205ENST00000488203 DIP2BQ9P265 1576 aa13.18□□□□□ -0.3
CIT-205ENST00000488203 ABCC3O15438 1527 aa13.17□□□□□ -0.3
CIT-205ENST00000488203 LAMC1P11047 1609 aa13.16□□□□□ -0.3
CIT-205ENST00000488203 CFAP65Q6ZU64 1925 aaKnown RBP13.16□□□□□ -0.3
CIT-205ENST00000488203 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
CIT-205ENST00000488203 TMF1P82094 1093 aa13.15□□□□□ -0.3
CIT-205ENST00000488203 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
CIT-205ENST00000488203 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
CIT-205ENST00000488203 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
CIT-205ENST00000488203 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
CIT-205ENST00000488203 SENP3-EIF4A1A0A087X0R7 540 aa13.13□□□□□ -0.31
CIT-205ENST00000488203 PANK3Q9H999 370 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms