RNA–Protein interactions for RNA: ENST00000487947.6

PDCD10-214, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-214ENST00000487947 ZBED2Q9BTP6 218 aa11.15□□□□□ -0.62
PDCD10-214ENST00000487947 COL9A1P20849 921 aa11.14□□□□□ -0.63
PDCD10-214ENST00000487947 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
PDCD10-214ENST00000487947 SLC4A5Q9BY07 1137 aa11.14□□□□□ -0.63
PDCD10-214ENST00000487947 NBR1Q14596 966 aa11.12□□□□□ -0.63
PDCD10-214ENST00000487947 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
PDCD10-214ENST00000487947 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
PDCD10-214ENST00000487947 GRXCR2A6NFK2 248 aa11.11□□□□□ -0.63
PDCD10-214ENST00000487947 PPP1R3GB7ZBB8 358 aa11.11□□□□□ -0.63
PDCD10-214ENST00000487947 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
PDCD10-214ENST00000487947 PROX2Q3B8N5 592 aa11.09□□□□□ -0.63
PDCD10-214ENST00000487947 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
PDCD10-214ENST00000487947 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
PDCD10-214ENST00000487947 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
PDCD10-214ENST00000487947 EN1Q05925 392 aaPredicted RBP11.08□□□□□ -0.64
PDCD10-214ENST00000487947 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
PDCD10-214ENST00000487947 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
PDCD10-214ENST00000487947 MAP3K7O43318 606 aa11.06□□□□□ -0.64
PDCD10-214ENST00000487947 OSBPP22059 807 aa11.04□□□□□ -0.64
PDCD10-214ENST00000487947 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
PDCD10-214ENST00000487947 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
PDCD10-214ENST00000487947 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
PDCD10-214ENST00000487947 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
PDCD10-214ENST00000487947 P3H3Q8IVL6 736 aa11□□□□□ -0.65
PDCD10-214ENST00000487947 NBPF3Q9H094 633 aa11□□□□□ -0.65
PDCD10-214ENST00000487947 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
PDCD10-214ENST00000487947 GOLGA8CPA6NN73 597 aa10.98□□□□□ -0.65
PDCD10-214ENST00000487947 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
PDCD10-214ENST00000487947 CDHR5Q9HBB8 845 aa10.98□□□□□ -0.65
PDCD10-214ENST00000487947 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
PDCD10-214ENST00000487947 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
PDCD10-214ENST00000487947 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
PDCD10-214ENST00000487947 WNT2BQ93097 391 aa10.95□□□□□ -0.66
PDCD10-214ENST00000487947 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
PDCD10-214ENST00000487947 PTPN5P54829 565 aa10.94□□□□□ -0.66
PDCD10-214ENST00000487947 SEPT9Q9UHD8 586 aaPredicted RBP10.94□□□□□ -0.66
PDCD10-214ENST00000487947 SEMA3EO15041 775 aa10.93□□□□□ -0.66
PDCD10-214ENST00000487947 PRSS12P56730 875 aa10.93□□□□□ -0.66
PDCD10-214ENST00000487947 THSD4Q6ZMP0 1018 aa10.93□□□□□ -0.66
PDCD10-214ENST00000487947 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
PDCD10-214ENST00000487947 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
PDCD10-214ENST00000487947 FAM198AQ9UFP1 575 aa10.92□□□□□ -0.66
PDCD10-214ENST00000487947 LAPTM4BQ86VI4 370 aa10.91□□□□□ -0.66
PDCD10-214ENST00000487947 PACS2Q86VP3 889 aa10.9□□□□□ -0.66
PDCD10-214ENST00000487947 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
PDCD10-214ENST00000487947 ZFRQ96KR1 1074 aaKnown RBP10.89□□□□□ -0.67
PDCD10-214ENST00000487947 C3orf80F5H4A9 247 aa10.88□□□□□ -0.67
PDCD10-214ENST00000487947 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
PDCD10-214ENST00000487947 SMAPO00193 183 aa10.87□□□□□ -0.67
PDCD10-214ENST00000487947 FAM98CQ17RN3 349 aaKnown RBP10.87□□□□□ -0.67
PDCD10-214ENST00000487947 BCAMP50895 628 aa10.86□□□□□ -0.67
PDCD10-214ENST00000487947 VSIG10Q8N0Z9 540 aa10.86□□□□□ -0.67
PDCD10-214ENST00000487947 TATDN2Q93075 761 aa10.84□□□□□ -0.67
PDCD10-214ENST00000487947 PNMA3Q9UL41 463 aa10.84□□□□□ -0.67
PDCD10-214ENST00000487947 TESPA1A2RU30 521 aaPredicted RBP10.83□□□□□ -0.68
PDCD10-214ENST00000487947 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
PDCD10-214ENST00000487947 PADI6Q6TGC4 694 aa10.83□□□□□ -0.68
PDCD10-214ENST00000487947 PLA2G2EQ9NZK7 142 aa10.83□□□□□ -0.68
PDCD10-214ENST00000487947 RBM27Q9P2N5 1060 aaKnown RBP10.83□□□□□ -0.68
PDCD10-214ENST00000487947 TTC13Q8NBP0 860 aa10.82□□□□□ -0.68
PDCD10-214ENST00000487947 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
PDCD10-214ENST00000487947 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
PDCD10-214ENST00000487947 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
PDCD10-214ENST00000487947 PTGDRQ13258 359 aa10.8□□□□□ -0.68
PDCD10-214ENST00000487947 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
PDCD10-214ENST00000487947 RBM26Q5T8P6 1007 aaKnown RBP10.78□□□□□ -0.68
PDCD10-214ENST00000487947 LRCH3Q96II8 777 aa10.78□□□□□ -0.68
PDCD10-214ENST00000487947 SAMD7Q7Z3H4 446 aa10.77□□□□□ -0.69
PDCD10-214ENST00000487947 WBP1LQ9NX94 342 aa10.77□□□□□ -0.69
PDCD10-214ENST00000487947 SMYD5Q6GMV2 418 aa10.75□□□□□ -0.69
PDCD10-214ENST00000487947 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
PDCD10-214ENST00000487947 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
PDCD10-214ENST00000487947 FCHSD2O94868 740 aa10.73□□□□□ -0.69
PDCD10-214ENST00000487947 EYA1Q99502 592 aa10.72□□□□□ -0.69
PDCD10-214ENST00000487947 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
PDCD10-214ENST00000487947 PPP4CP60510 307 aa10.69□□□□□ -0.7
PDCD10-214ENST00000487947 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
PDCD10-214ENST00000487947 ADGRG1Q9Y653 693 aa10.69□□□□□ -0.7
PDCD10-214ENST00000487947 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
PDCD10-214ENST00000487947 NYAP1Q6ZVC0 841 aa10.68□□□□□ -0.7
PDCD10-214ENST00000487947 RNF40O75150 1001 aa10.67□□□□□ -0.7
PDCD10-214ENST00000487947 GPR37O15354 613 aa10.66□□□□□ -0.7
PDCD10-214ENST00000487947 HIC1Q14526 733 aa10.66□□□□□ -0.7
PDCD10-214ENST00000487947 FECHP22830 423 aa10.65□□□□□ -0.7
PDCD10-214ENST00000487947 RBM46Q8TBY0 533 aaKnown RBP10.65□□□□□ -0.7
PDCD10-214ENST00000487947 IFFO2Q5TF58 517 aa10.64□□□□□ -0.71
PDCD10-214ENST00000487947 GNPATO15228 680 aa10.63□□□□□ -0.71
PDCD10-214ENST00000487947 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
PDCD10-214ENST00000487947 DNAJB2P25686 324 aa10.62□□□□□ -0.71
PDCD10-214ENST00000487947 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
PDCD10-214ENST00000487947 GPIHBP1Q8IV16 184 aa10.61□□□□□ -0.71
PDCD10-214ENST00000487947 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
PDCD10-214ENST00000487947 APLP1P51693 650 aa10.59□□□□□ -0.71
PDCD10-214ENST00000487947 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
PDCD10-214ENST00000487947 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
PDCD10-214ENST00000487947 KCNC4Q03721 635 aa10.58□□□□□ -0.72
PDCD10-214ENST00000487947 A0A0G2JS52 829 aa10.57□□□□□ -0.72
PDCD10-214ENST00000487947 OATP04181 439 aa10.57□□□□□ -0.72
PDCD10-214ENST00000487947 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
PDCD10-214ENST00000487947 METTL3Q86U44 580 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms