RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
CCDC66-221ENST00000487739 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
CCDC66-221ENST00000487739 DDX12PQ92771 950 aa11.42□□□□□ -0.58
CCDC66-221ENST00000487739 NBR1Q14596 966 aa11.38□□□□□ -0.59
CCDC66-221ENST00000487739 C6orf132Q5T0Z8 1188 aa11.37□□□□□ -0.59
CCDC66-221ENST00000487739 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
CCDC66-221ENST00000487739 COL9A1P20849 921 aa11.36□□□□□ -0.59
CCDC66-221ENST00000487739 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
CCDC66-221ENST00000487739 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
CCDC66-221ENST00000487739 NBPF3Q9H094 633 aa11.36□□□□□ -0.59
CCDC66-221ENST00000487739 HCSTQ9UBK5 93 aa11.36□□□□□ -0.59
CCDC66-221ENST00000487739 EN1Q05925 392 aaPredicted RBP11.35□□□□□ -0.59
CCDC66-221ENST00000487739 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
CCDC66-221ENST00000487739 MAP3K7O43318 606 aa11.33□□□□□ -0.6
CCDC66-221ENST00000487739 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
CCDC66-221ENST00000487739 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
CCDC66-221ENST00000487739 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
CCDC66-221ENST00000487739 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
CCDC66-221ENST00000487739 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
CCDC66-221ENST00000487739 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
CCDC66-221ENST00000487739 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
CCDC66-221ENST00000487739 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
CCDC66-221ENST00000487739 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
CCDC66-221ENST00000487739 WNT2BQ93097 391 aa11.27□□□□□ -0.61
CCDC66-221ENST00000487739 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
CCDC66-221ENST00000487739 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
CCDC66-221ENST00000487739 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
CCDC66-221ENST00000487739 P3H3Q8IVL6 736 aa11.25□□□□□ -0.61
CCDC66-221ENST00000487739 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
CCDC66-221ENST00000487739 OSBPP22059 807 aa11.23□□□□□ -0.61
CCDC66-221ENST00000487739 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
CCDC66-221ENST00000487739 PTPN5P54829 565 aa11.23□□□□□ -0.61
CCDC66-221ENST00000487739 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
CCDC66-221ENST00000487739 ANKK1Q8NFD2 765 aa11.21□□□□□ -0.61
CCDC66-221ENST00000487739 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
CCDC66-221ENST00000487739 PACS2Q86VP3 889 aa11.19□□□□□ -0.62
CCDC66-221ENST00000487739 SEPT9Q9UHD8 586 aaPredicted RBP11.19□□□□□ -0.62
CCDC66-221ENST00000487739 PRSS12P56730 875 aa11.18□□□□□ -0.62
CCDC66-221ENST00000487739 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
CCDC66-221ENST00000487739 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
CCDC66-221ENST00000487739 FAM98CQ17RN3 349 aaKnown RBP11.17□□□□□ -0.62
CCDC66-221ENST00000487739 ZFRQ96KR1 1074 aaKnown RBP11.17□□□□□ -0.62
CCDC66-221ENST00000487739 CDHR5Q9HBB8 845 aa11.17□□□□□ -0.62
CCDC66-221ENST00000487739 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
CCDC66-221ENST00000487739 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
CCDC66-221ENST00000487739 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
CCDC66-221ENST00000487739 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
CCDC66-221ENST00000487739 BCAMP50895 628 aa11.13□□□□□ -0.63
CCDC66-221ENST00000487739 NBPF26B4DH59 902 aa11.12□□□□□ -0.63
CCDC66-221ENST00000487739 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
CCDC66-221ENST00000487739 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
CCDC66-221ENST00000487739 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
CCDC66-221ENST00000487739 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
CCDC66-221ENST00000487739 TATDN2Q93075 761 aa11.08□□□□□ -0.64
CCDC66-221ENST00000487739 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
CCDC66-221ENST00000487739 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
CCDC66-221ENST00000487739 SMAPO00193 183 aa11.07□□□□□ -0.64
CCDC66-221ENST00000487739 SEMA3EO15041 775 aa11.06□□□□□ -0.64
CCDC66-221ENST00000487739 PADI6Q6TGC4 694 aa11.06□□□□□ -0.64
CCDC66-221ENST00000487739 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
CCDC66-221ENST00000487739 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
CCDC66-221ENST00000487739 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
CCDC66-221ENST00000487739 WBP1LQ9NX94 342 aa11.04□□□□□ -0.64
CCDC66-221ENST00000487739 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
CCDC66-221ENST00000487739 C3orf80F5H4A9 247 aa11.03□□□□□ -0.64
CCDC66-221ENST00000487739 PTGDRQ13258 359 aa11.02□□□□□ -0.65
CCDC66-221ENST00000487739 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
CCDC66-221ENST00000487739 SAMD7Q7Z3H4 446 aa11.02□□□□□ -0.65
CCDC66-221ENST00000487739 NUTM2FA1L443 756 aa11.01□□□□□ -0.65
CCDC66-221ENST00000487739 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
CCDC66-221ENST00000487739 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
CCDC66-221ENST00000487739 TESPA1A2RU30 521 aaPredicted RBP10.99□□□□□ -0.65
CCDC66-221ENST00000487739 PPP4CP60510 307 aa10.99□□□□□ -0.65
CCDC66-221ENST00000487739 SMYD5Q6GMV2 418 aa10.99□□□□□ -0.65
CCDC66-221ENST00000487739 ITGBL1O95965 494 aaPredicted RBP10.98□□□□□ -0.65
CCDC66-221ENST00000487739 FCHSD2O94868 740 aa10.96□□□□□ -0.65
CCDC66-221ENST00000487739 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.65
CCDC66-221ENST00000487739 RNF40O75150 1001 aa10.95□□□□□ -0.66
CCDC66-221ENST00000487739 EYA1Q99502 592 aa10.94□□□□□ -0.66
CCDC66-221ENST00000487739 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
CCDC66-221ENST00000487739 A0A0G2JS52 829 aa10.92□□□□□ -0.66
CCDC66-221ENST00000487739 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
CCDC66-221ENST00000487739 SWT1Q5T5J6 900 aaKnown RBP10.92□□□□□ -0.66
CCDC66-221ENST00000487739 SLF2Q8IX21 1173 aa10.92□□□□□ -0.66
CCDC66-221ENST00000487739 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
CCDC66-221ENST00000487739 KCNC4Q03721 635 aa10.91□□□□□ -0.66
CCDC66-221ENST00000487739 RBM26Q5T8P6 1007 aaKnown RBP10.91□□□□□ -0.66
CCDC66-221ENST00000487739 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
CCDC66-221ENST00000487739 DNAJB2P25686 324 aa10.89□□□□□ -0.67
CCDC66-221ENST00000487739 HIC1Q14526 733 aa10.89□□□□□ -0.67
CCDC66-221ENST00000487739 RGS20O76081 388 aa10.87□□□□□ -0.67
CCDC66-221ENST00000487739 FAM161AQ3B820 660 aa10.85□□□□□ -0.67
CCDC66-221ENST00000487739 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
CCDC66-221ENST00000487739 APLP1P51693 650 aa10.84□□□□□ -0.67
CCDC66-221ENST00000487739 TMEM134Q9H6X4 195 aa10.84□□□□□ -0.67
CCDC66-221ENST00000487739 GNPATO15228 680 aa10.83□□□□□ -0.68
CCDC66-221ENST00000487739 OATP04181 439 aa10.83□□□□□ -0.68
CCDC66-221ENST00000487739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
CCDC66-221ENST00000487739 TJAP1Q5JTD0 557 aa10.82□□□□□ -0.68
CCDC66-221ENST00000487739 MTRQ99707 1265 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms