RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 MLH3Q9UHC1 1453 aa29■■■□□ 2.23
PHF1-209ENST00000487667 KIF13AQ9H1H9 1805 aa28.98■■■□□ 2.23
PHF1-209ENST00000487667 MYT1LQ9UL68 1186 aa28.98■■■□□ 2.23
PHF1-209ENST00000487667 DEPDC5O75140 1603 aa28.97■■■□□ 2.23
PHF1-209ENST00000487667 TSPOAP1O95153 1857 aa28.96■■■□□ 2.23
PHF1-209ENST00000487667 KIDINS220Q9ULH0 1771 aa28.96■■■□□ 2.23
PHF1-209ENST00000487667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.95■■■□□ 2.236e-7■■■□□ 15
PHF1-209ENST00000487667 KANK1Q14678 1352 aa28.95■■■□□ 2.22
PHF1-209ENST00000487667 HECW2Q9P2P5 1572 aa28.94■■■□□ 2.22
PHF1-209ENST00000487667 TRHP20396 242 aaPredicted RBP28.93■■■□□ 2.22
PHF1-209ENST00000487667 ATP10AO60312 1499 aa28.93■■■□□ 2.22
PHF1-209ENST00000487667 RAPGEF3O95398 923 aa28.9■■■□□ 2.22
PHF1-209ENST00000487667 PPRC1Q5VV67 1664 aaKnown RBP28.89■■■□□ 2.22
PHF1-209ENST00000487667 CCDC144AA2RUR9 1427 aa28.89■■■□□ 2.22
PHF1-209ENST00000487667 A2MP01023 1474 aa28.88■■■□□ 2.21
PHF1-209ENST00000487667 PRDM15P57071 1507 aaPredicted RBP28.86■■■□□ 2.21
PHF1-209ENST00000487667 VWDEQ8N2E2 1590 aa28.86■■■□□ 2.21
PHF1-209ENST00000487667 TET3O43151 1660 aa28.83■■■□□ 2.21
PHF1-209ENST00000487667 KIF3BO15066 747 aa28.83■■■□□ 2.21
PHF1-209ENST00000487667 BCORL1Q5H9F3 1711 aa28.81■■■□□ 2.2
PHF1-209ENST00000487667 UHRF1BP1Q6BDS2 1440 aa28.8■■■□□ 2.2
PHF1-209ENST00000487667 RICTORQ6R327 1708 aa28.8■■■□□ 2.2
PHF1-209ENST00000487667 RNF17Q9BXT8 1623 aaKnown RBP28.8■■■□□ 2.2
PHF1-209ENST00000487667 PLA2R1Q13018 1463 aa28.79■■■□□ 2.2
PHF1-209ENST00000487667 EIF4G2P78344 907 aaKnown RBP eCLIP28.78■■■□□ 2.2
PHF1-209ENST00000487667 LMTK2Q8IWU2 1503 aa28.76■■■□□ 2.19
PHF1-209ENST00000487667 MROH1Q8NDA8 1641 aa28.75■■■□□ 2.19
PHF1-209ENST00000487667 ABCA6Q8N139 1617 aa28.75■■■□□ 2.19
PHF1-209ENST00000487667 E9PCH4 1651 aa28.75■■■□□ 2.19
PHF1-209ENST00000487667 ZMYM4Q5VZL5 1548 aa28.73■■■□□ 2.19
PHF1-209ENST00000487667 NBPF8Q3BBV2 869 aa28.73■■■□□ 2.19
PHF1-209ENST00000487667 PTPRTO14522 1441 aa28.72■■■□□ 2.19
PHF1-209ENST00000487667 TRPM2O94759 1503 aa28.72■■■□□ 2.19
PHF1-209ENST00000487667 FRMPD1Q5SYB0 1578 aa28.72■■■□□ 2.19
PHF1-209ENST00000487667 DIP2CQ9Y2E4 1556 aa28.7■■■□□ 2.19
PHF1-209ENST00000487667 SPHKAPQ2M3C7 1700 aa28.69■■■□□ 2.18
PHF1-209ENST00000487667 COL17A1Q9UMD9 1497 aaPredicted RBP28.68■■■□□ 2.18
PHF1-209ENST00000487667 RALGAPBQ86X10 1494 aa28.67■■■□□ 2.18
PHF1-209ENST00000487667 HSPA5P11021 654 aaKnown RBP28.67■■■□□ 2.18
PHF1-209ENST00000487667 STAC3Q96MF2 364 aa28.67■■■□□ 2.18
PHF1-209ENST00000487667 EFCAB6Q5THR3 1501 aa28.66■■■□□ 2.18
PHF1-209ENST00000487667 MIER1Q8N108 512 aa28.65■■■□□ 2.18
PHF1-209ENST00000487667 DCAF11Q8TEB1 546 aa28.63■■■□□ 2.17
PHF1-209ENST00000487667 NEURL4Q96JN8 1562 aa28.63■■■□□ 2.17
PHF1-209ENST00000487667 YEATS2Q9ULM3 1422 aa28.61■■■□□ 2.17
PHF1-209ENST00000487667 SPATA31E1Q6ZUB1 1445 aa28.59■■■□□ 2.17
PHF1-209ENST00000487667 CEP152O94986 1710 aa28.59■■■□□ 2.17
PHF1-209ENST00000487667 HIRIP3Q9BW71 556 aaPredicted RBP28.58■■■□□ 2.17
PHF1-209ENST00000487667 REREQ9P2R6 1566 aa28.57■■■□□ 2.16
PHF1-209ENST00000487667 ZNF326Q5BKZ1 582 aaKnown RBP28.57■■■□□ 2.16
PHF1-209ENST00000487667 PRAG1Q86YV5 1406 aa28.56■■■□□ 2.16
PHF1-209ENST00000487667 DDX10Q13206 875 aaKnown RBP28.55■■■□□ 2.16
PHF1-209ENST00000487667 ZC3H13Q5T200 1668 aaKnown RBP28.55■■■□□ 2.16
PHF1-209ENST00000487667 GGT6Q6P531 493 aa28.54■■■□□ 2.16
PHF1-209ENST00000487667 KDM2AQ9Y2K7 1162 aa28.54■■■□□ 2.16
PHF1-209ENST00000487667 ABCC3O15438 1527 aa28.53■■■□□ 2.16
PHF1-209ENST00000487667 RGL3Q3MIN7 710 aa28.53■■■□□ 2.16
PHF1-209ENST00000487667 CLTCL1P53675 1640 aa28.53■■■□□ 2.16
PHF1-209ENST00000487667 WASHC2CQ9Y4E1 1318 aa28.52■■■□□ 2.16
PHF1-209ENST00000487667 USP47Q96K76 1375 aa28.52■■■□□ 2.16
PHF1-209ENST00000487667 CNTLNQ9NXG0 1405 aa28.49■■■□□ 2.15
PHF1-209ENST00000487667 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
PHF1-209ENST00000487667 TRPM1Q7Z4N2 1603 aa28.48■■■□□ 2.15
PHF1-209ENST00000487667 ARHGAP31Q2M1Z3 1444 aa28.48■■■□□ 2.15
PHF1-209ENST00000487667 PPP6R1Q9UPN7 881 aa28.48■■■□□ 2.15
PHF1-209ENST00000487667 AGLP35573 1532 aa28.48■■■□□ 2.15
PHF1-209ENST00000487667 LAMC1P11047 1609 aa28.47■■■□□ 2.15
PHF1-209ENST00000487667 POLR1AO95602 1720 aaPredicted RBP28.47■■■□□ 2.15
PHF1-209ENST00000487667 ARID4BQ4LE39 1312 aaPredicted RBP28.47■■■□□ 2.15
PHF1-209ENST00000487667 ROCK2O75116 1388 aaKnown RBP28.47■■■□□ 2.15
PHF1-209ENST00000487667 CAMSAP1Q5T5Y3 1602 aa28.46■■■□□ 2.15
PHF1-209ENST00000487667 GPRASP1Q5JY77 1395 aa28.46■■■□□ 2.15
PHF1-209ENST00000487667 NPATQ14207 1427 aa28.46■■■□□ 2.15
PHF1-209ENST00000487667 KIF1BO60333 1816 aa28.44■■■□□ 2.14
PHF1-209ENST00000487667 WASHC2AQ641Q2 1341 aa28.44■■■□□ 2.14
PHF1-209ENST00000487667 CCDC7Q96M83 1385 aa28.42■■■□□ 2.14
PHF1-209ENST00000487667 ARHGEF40Q8TER5 1519 aa28.39■■■□□ 2.13
PHF1-209ENST00000487667 ANP32CO43423 234 aa28.38■■■□□ 2.13
PHF1-209ENST00000487667 NOS1P29475 1434 aa28.37■■■□□ 2.13
PHF1-209ENST00000487667 CENPBP07199 599 aaPredicted RBP28.37■■■□□ 2.13
PHF1-209ENST00000487667 MADDQ8WXG6 1647 aa28.36■■■□□ 2.13
PHF1-209ENST00000487667 MYOM2P54296 1465 aa28.36■■■□□ 2.13
PHF1-209ENST00000487667 ADGRB3O60242 1522 aa28.33■■■□□ 2.13
PHF1-209ENST00000487667 KIAA1210Q9ULL0 1709 aa28.31■■■□□ 2.12
PHF1-209ENST00000487667 KIF7Q2M1P5 1343 aa28.31■■■□□ 2.12
PHF1-209ENST00000487667 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
PHF1-209ENST00000487667 UGGT1Q9NYU2 1555 aa28.3■■■□□ 2.12
PHF1-209ENST00000487667 CCER2I3L3R5 266 aa28.29■■■□□ 2.12
PHF1-209ENST00000487667 SCAF1Q9H7N4 1312 aaKnown RBP28.29■■■□□ 2.12
PHF1-209ENST00000487667 SLC52A1Q9NWF4 448 aa28.28■■■□□ 2.12
PHF1-209ENST00000487667 PIK3C2BO00750 1634 aa28.28■■■□□ 2.12
PHF1-209ENST00000487667 MLECQ14165 292 aa28.28■■■□□ 2.12
PHF1-209ENST00000487667 IFT172Q9UG01 1749 aa28.27■■■□□ 2.12
PHF1-209ENST00000487667 C11orf95C9JLR9 678 aaPredicted RBP28.27■■■□□ 2.12
PHF1-209ENST00000487667 ST20-MTHFSA0A0A6YYL1 179 aa28.25■■■□□ 2.11
PHF1-209ENST00000487667 NBPF1Q3BBV0 1214 aa28.25■■■□□ 2.11
PHF1-209ENST00000487667 SIGLEC1Q9BZZ2 1709 aa28.24■■■□□ 2.11
PHF1-209ENST00000487667 NRXN1Q9ULB1 1477 aa28.23■■■□□ 2.11
PHF1-209ENST00000487667 SYNMO15061 1565 aa28.22■■■□□ 2.11
PHF1-209ENST00000487667 MROH2AA6NES4 1674 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms