RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
GARNL3-218ENST00000487565 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
GARNL3-218ENST00000487565 KIF3CO14782 793 aa12.32□□□□□ -0.44
GARNL3-218ENST00000487565 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-218ENST00000487565 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
GARNL3-218ENST00000487565 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
GARNL3-218ENST00000487565 CEP162Q5TB80 1403 aa12.3□□□□□ -0.44
GARNL3-218ENST00000487565 EFCAB5A4FU69 1503 aa12.28□□□□□ -0.44
GARNL3-218ENST00000487565 CLIP1P30622 1438 aa12.28□□□□□ -0.44
GARNL3-218ENST00000487565 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.44
GARNL3-218ENST00000487565 EMP3P54852 163 aa12.27□□□□□ -0.45
GARNL3-218ENST00000487565 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
GARNL3-218ENST00000487565 SAMD9Q5K651 1589 aa12.25□□□□□ -0.45
GARNL3-218ENST00000487565 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-218ENST00000487565 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-218ENST00000487565 KIAA0556O60303 1618 aa12.23□□□□□ -0.45
GARNL3-218ENST00000487565 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-218ENST00000487565 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
GARNL3-218ENST00000487565 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-218ENST00000487565 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
GARNL3-218ENST00000487565 CARMIL2Q6F5E8 1435 aa12.22□□□□□ -0.45
GARNL3-218ENST00000487565 DISP1Q96F81 1524 aa12.21□□□□□ -0.45
GARNL3-218ENST00000487565 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-218ENST00000487565 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
GARNL3-218ENST00000487565 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
GARNL3-218ENST00000487565 FOXK1P85037 733 aa12.19□□□□□ -0.46
GARNL3-218ENST00000487565 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
GARNL3-218ENST00000487565 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
GARNL3-218ENST00000487565 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
GARNL3-218ENST00000487565 ARSIQ5FYB1 569 aa12.18□□□□□ -0.46
GARNL3-218ENST00000487565 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
GARNL3-218ENST00000487565 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
GARNL3-218ENST00000487565 PLPP6Q8IY26 295 aa12.18□□□□□ -0.46
GARNL3-218ENST00000487565 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
GARNL3-218ENST00000487565 DSG2Q14126 1118 aa12.17□□□□□ -0.46
GARNL3-218ENST00000487565 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
GARNL3-218ENST00000487565 PDE4AP27815 886 aa12.16□□□□□ -0.46
GARNL3-218ENST00000487565 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
GARNL3-218ENST00000487565 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
GARNL3-218ENST00000487565 ERBB3P21860 1342 aa12.14□□□□□ -0.47
GARNL3-218ENST00000487565 SLC34A2O95436 690 aa12.14□□□□□ -0.47
GARNL3-218ENST00000487565 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-218ENST00000487565 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
GARNL3-218ENST00000487565 NCKAP5LQ9HCH0 1330 aa12.13□□□□□ -0.47
GARNL3-218ENST00000487565 FMN1Q68DA7 1419 aa12.13□□□□□ -0.47
GARNL3-218ENST00000487565 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
GARNL3-218ENST00000487565 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
GARNL3-218ENST00000487565 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.47
GARNL3-218ENST00000487565 VPS8Q8N3P4 1428 aa12.12□□□□□ -0.47
GARNL3-218ENST00000487565 PCDHGA4Q9Y5G9 962 aa12.12□□□□□ -0.47
GARNL3-218ENST00000487565 PCF11O94913 1555 aaKnown RBP12.12□□□□□ -0.47
GARNL3-218ENST00000487565 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
GARNL3-218ENST00000487565 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
GARNL3-218ENST00000487565 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
GARNL3-218ENST00000487565 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
GARNL3-218ENST00000487565 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
GARNL3-218ENST00000487565 PTPRGP23470 1445 aa12.1□□□□□ -0.47
GARNL3-218ENST00000487565 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
GARNL3-218ENST00000487565 RIMBP3CA6NJZ7 1639 aa12.09□□□□□ -0.47
GARNL3-218ENST00000487565 RIMBP3BA6NNM3 1639 aa12.09□□□□□ -0.47
GARNL3-218ENST00000487565 RIMBP3Q9UFD9 1639 aa12.09□□□□□ -0.47
GARNL3-218ENST00000487565 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-218ENST00000487565 HECW1Q76N89 1606 aa12.08□□□□□ -0.48
GARNL3-218ENST00000487565 NUDT7P0C024 238 aa12.08□□□□□ -0.48
GARNL3-218ENST00000487565 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
GARNL3-218ENST00000487565 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
GARNL3-218ENST00000487565 RAPGEF6Q8TEU7 1601 aa12.07□□□□□ -0.48
GARNL3-218ENST00000487565 ABCA8O94911 1581 aa12.06□□□□□ -0.48
GARNL3-218ENST00000487565 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
GARNL3-218ENST00000487565 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
GARNL3-218ENST00000487565 PLB1Q6P1J6 1458 aa12.05□□□□□ -0.48
GARNL3-218ENST00000487565 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
GARNL3-218ENST00000487565 ABCC2Q92887 1545 aa12.04□□□□□ -0.48
GARNL3-218ENST00000487565 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
GARNL3-218ENST00000487565 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-218ENST00000487565 TBC1D12O60347 775 aa12.03□□□□□ -0.48
GARNL3-218ENST00000487565 MFSD10Q14728 455 aa12.03□□□□□ -0.48
GARNL3-218ENST00000487565 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
GARNL3-218ENST00000487565 NUP153P49790 1475 aaKnown RBP12.02□□□□□ -0.49
GARNL3-218ENST00000487565 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.49
GARNL3-218ENST00000487565 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
GARNL3-218ENST00000487565 CFAP43Q8NDM7 1665 aa12□□□□□ -0.49
GARNL3-218ENST00000487565 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
GARNL3-218ENST00000487565 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
GARNL3-218ENST00000487565 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
GARNL3-218ENST00000487565 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
GARNL3-218ENST00000487565 EPRSP07814 1512 aaKnown RBP11.98□□□□□ -0.49
GARNL3-218ENST00000487565 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
GARNL3-218ENST00000487565 TIAM1Q13009 1591 aa11.97□□□□□ -0.49
GARNL3-218ENST00000487565 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.49
GARNL3-218ENST00000487565 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
GARNL3-218ENST00000487565 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.49
GARNL3-218ENST00000487565 MAP3K1Q13233 1512 aa11.96□□□□□ -0.5
GARNL3-218ENST00000487565 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
GARNL3-218ENST00000487565 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
GARNL3-218ENST00000487565 ZCCHC11Q5TAX3 1644 aaKnown RBP11.94□□□□□ -0.5
GARNL3-218ENST00000487565 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
GARNL3-218ENST00000487565 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
GARNL3-218ENST00000487565 EHBP1L1Q8N3D4 1523 aa11.93□□□□□ -0.5
GARNL3-218ENST00000487565 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms