RNA–Protein interactions for RNA: ENST00000486715.5

GFM1-210, Transcript of G elongation factor mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFM1, Length 3,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-210ENST00000486715 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
GFM1-210ENST00000486715 CUL7Q14999 1698 aa13.07□□□□□ -0.32
GFM1-210ENST00000486715 HFM1A2PYH4 1435 aa13.07□□□□□ -0.32
GFM1-210ENST00000486715 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
GFM1-210ENST00000486715 UPF2Q9HAU5 1272 aaKnown RBP13.07□□□□□ -0.32
GFM1-210ENST00000486715 IGF1RP08069 1367 aa13.07□□□□□ -0.32
GFM1-210ENST00000486715 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
GFM1-210ENST00000486715 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
GFM1-210ENST00000486715 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
GFM1-210ENST00000486715 RGL3Q3MIN7 710 aa13.05□□□□□ -0.32
GFM1-210ENST00000486715 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
GFM1-210ENST00000486715 DHX29Q7Z478 1369 aaKnown RBP13.04□□□□□ -0.32
GFM1-210ENST00000486715 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
GFM1-210ENST00000486715 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
GFM1-210ENST00000486715 NLRP13Q86W25 1043 aa13.03□□□□□ -0.32
GFM1-210ENST00000486715 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
GFM1-210ENST00000486715 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
GFM1-210ENST00000486715 NEUROD2Q15784 382 aa13.02□□□□□ -0.33
GFM1-210ENST00000486715 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
GFM1-210ENST00000486715 ESPNB1AK53 854 aa13.01□□□□□ -0.33
GFM1-210ENST00000486715 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
GFM1-210ENST00000486715 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
GFM1-210ENST00000486715 RALBP1Q15311 655 aa13.01□□□□□ -0.33
GFM1-210ENST00000486715 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
GFM1-210ENST00000486715 CLCN1P35523 988 aa13□□□□□ -0.33
GFM1-210ENST00000486715 PKD2Q13563 968 aa13□□□□□ -0.33
GFM1-210ENST00000486715 TRAK2O60296 914 aa13□□□□□ -0.33
GFM1-210ENST00000486715 BCAR3O75815 825 aa13□□□□□ -0.33
GFM1-210ENST00000486715 COG6Q9Y2V7 657 aa12.99□□□□□ -0.33
GFM1-210ENST00000486715 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
GFM1-210ENST00000486715 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
GFM1-210ENST00000486715 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
GFM1-210ENST00000486715 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
GFM1-210ENST00000486715 ZNF644Q9H582 1327 aaPredicted RBP12.98□□□□□ -0.33
GFM1-210ENST00000486715 KIAA1211Q6ZU35 1233 aa12.98□□□□□ -0.33
GFM1-210ENST00000486715 CLUAP1Q96AJ1 413 aa12.97□□□□□ -0.33
GFM1-210ENST00000486715 KDM5BQ9UGL1 1544 aa12.97□□□□□ -0.33
GFM1-210ENST00000486715 IGHDP01880 384 aa12.97□□□□□ -0.33
GFM1-210ENST00000486715 NCLP19338 710 aaKnown RBP12.97□□□□□ -0.33
GFM1-210ENST00000486715 MCM4P33991 863 aa12.96□□□□□ -0.33
GFM1-210ENST00000486715 PANK1Q8TE04 598 aa12.96□□□□□ -0.33
GFM1-210ENST00000486715 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.33
GFM1-210ENST00000486715 KIF13AQ9H1H9 1805 aa12.96□□□□□ -0.34
GFM1-210ENST00000486715 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
GFM1-210ENST00000486715 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
GFM1-210ENST00000486715 GRPEL1Q9HAV7 217 aa12.95□□□□□ -0.34
GFM1-210ENST00000486715 ZHX1Q9UKY1 873 aaPredicted RBP12.95□□□□□ -0.34
GFM1-210ENST00000486715 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
GFM1-210ENST00000486715 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
GFM1-210ENST00000486715 R3HCC1Q9Y3T6 440 aaKnown RBP12.94□□□□□ -0.34
GFM1-210ENST00000486715 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
GFM1-210ENST00000486715 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
GFM1-210ENST00000486715 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
GFM1-210ENST00000486715 PANK3Q9H999 370 aa12.93□□□□□ -0.34
GFM1-210ENST00000486715 MRE11P49959 708 aa12.93□□□□□ -0.34
GFM1-210ENST00000486715 ERCC6L2Q5T890 1561 aa12.93□□□□□ -0.34
GFM1-210ENST00000486715 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
GFM1-210ENST00000486715 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
GFM1-210ENST00000486715 ANKRD30BQ9BXX2 1392 aa12.91□□□□□ -0.34
GFM1-210ENST00000486715 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
GFM1-210ENST00000486715 APAF1O14727 1248 aa12.89□□□□□ -0.35
GFM1-210ENST00000486715 KIAA0586Q9BVV6 1533 aa12.89□□□□□ -0.35
GFM1-210ENST00000486715 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
GFM1-210ENST00000486715 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
GFM1-210ENST00000486715 HSCBQ8IWL3 235 aa12.88□□□□□ -0.35
GFM1-210ENST00000486715 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
GFM1-210ENST00000486715 USP19O94966 1318 aa12.87□□□□□ -0.35
GFM1-210ENST00000486715 SPATA31E1Q6ZUB1 1445 aa12.87□□□□□ -0.35
GFM1-210ENST00000486715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
GFM1-210ENST00000486715 ROCK2O75116 1388 aaKnown RBP12.87□□□□□ -0.35
GFM1-210ENST00000486715 DUSP27Q5VZP5 1158 aa12.87□□□□□ -0.35
GFM1-210ENST00000486715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.355e-6■□□□□ 8.1
GFM1-210ENST00000486715 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
GFM1-210ENST00000486715 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
GFM1-210ENST00000486715 CHMP5Q9NZZ3 219 aa12.87□□□□□ -0.35
GFM1-210ENST00000486715 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
GFM1-210ENST00000486715 NBPF1Q3BBV0 1214 aa12.86□□□□□ -0.35
GFM1-210ENST00000486715 MPNDQ8N594 471 aa12.86□□□□□ -0.35
GFM1-210ENST00000486715 DENND4BO75064 1496 aaPredicted RBP12.86□□□□□ -0.35
GFM1-210ENST00000486715 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
GFM1-210ENST00000486715 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
GFM1-210ENST00000486715 KDM6BO15054 1643 aa12.85□□□□□ -0.35
GFM1-210ENST00000486715 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
GFM1-210ENST00000486715 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
GFM1-210ENST00000486715 TPM2P07951 284 aa12.84□□□□□ -0.35
GFM1-210ENST00000486715 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
GFM1-210ENST00000486715 TNNQ9UQP3 1299 aa12.84□□□□□ -0.35
GFM1-210ENST00000486715 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
GFM1-210ENST00000486715 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
GFM1-210ENST00000486715 RPRD2Q5VT52 1461 aaKnown RBP12.83□□□□□ -0.35
GFM1-210ENST00000486715 FYCO1Q9BQS8 1478 aa12.83□□□□□ -0.35
GFM1-210ENST00000486715 C22orf23Q9BZE7 217 aa12.83□□□□□ -0.36
GFM1-210ENST00000486715 UHRF1BP1LA0JNW5 1464 aa12.83□□□□□ -0.36
GFM1-210ENST00000486715 GLI2P10070 1586 aa12.83□□□□□ -0.36
GFM1-210ENST00000486715 ANTXR1Q9H6X2 564 aa12.83□□□□□ -0.36
GFM1-210ENST00000486715 FSD2A1L4K1 749 aa12.82□□□□□ -0.36
GFM1-210ENST00000486715 CYB5RLQ6IPT4 315 aa12.82□□□□□ -0.36
GFM1-210ENST00000486715 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
GFM1-210ENST00000486715 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
GFM1-210ENST00000486715 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms