RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 EVI5O60447 810 aa9.82□□□□□ -0.84
USP41-204ENST00000486536 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
USP41-204ENST00000486536 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
USP41-204ENST00000486536 TMEM92Q6UXU6 159 aa9.82□□□□□ -0.84
USP41-204ENST00000486536 PTGDRQ13258 359 aa9.81□□□□□ -0.84
USP41-204ENST00000486536 TTLL12Q14166 644 aaPredicted RBP9.81□□□□□ -0.84
USP41-204ENST00000486536 GOPCQ9HD26 462 aa9.81□□□□□ -0.84
USP41-204ENST00000486536 FLIIQ13045 1269 aa9.8□□□□□ -0.84
USP41-204ENST00000486536 NESP48681 1621 aa9.79□□□□□ -0.84
USP41-204ENST00000486536 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
USP41-204ENST00000486536 HAX1O00165 279 aa9.78□□□□□ -0.84
USP41-204ENST00000486536 WRNQ14191 1432 aaPredicted RBP eCLIP9.78□□□□□ -0.84
USP41-204ENST00000486536 EVX2Q03828 476 aa9.77□□□□□ -0.85
USP41-204ENST00000486536 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
USP41-204ENST00000486536 PDS5BQ9NTI5 1447 aa9.76□□□□□ -0.85
USP41-204ENST00000486536 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
USP41-204ENST00000486536 ARID3AQ99856 593 aa9.76□□□□□ -0.85
USP41-204ENST00000486536 MS4A1P11836 297 aa9.75□□□□□ -0.85
USP41-204ENST00000486536 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
USP41-204ENST00000486536 ABCC8Q09428 1581 aa9.75□□□□□ -0.85
USP41-204ENST00000486536 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
USP41-204ENST00000486536 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
USP41-204ENST00000486536 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
USP41-204ENST00000486536 C1orf115Q9H7X2 142 aa9.74□□□□□ -0.85
USP41-204ENST00000486536 ANO8Q9HCE9 1232 aaPredicted RBP9.74□□□□□ -0.85
USP41-204ENST00000486536 SEC24BO95487 1268 aa9.73□□□□□ -0.85
USP41-204ENST00000486536 APBB1O00213 710 aa9.72□□□□□ -0.85
USP41-204ENST00000486536 NPDC1Q9NQX5 325 aaPredicted RBP9.72□□□□□ -0.85
USP41-204ENST00000486536 ARID3CA6NKF2 412 aa9.71□□□□□ -0.86
USP41-204ENST00000486536 ONECUT3O60422 494 aaPredicted RBP9.71□□□□□ -0.86
USP41-204ENST00000486536 COLQQ9Y215 455 aaPredicted RBP9.71□□□□□ -0.86
USP41-204ENST00000486536 CLCN1P35523 988 aa9.7□□□□□ -0.86
USP41-204ENST00000486536 EPAS1Q99814 870 aa9.7□□□□□ -0.86
USP41-204ENST00000486536 TMUB1Q9BVT8 246 aa9.7□□□□□ -0.86
USP41-204ENST00000486536 PHF14O94880 888 aa9.69□□□□□ -0.86
USP41-204ENST00000486536 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
USP41-204ENST00000486536 CDHR5Q9HBB8 845 aa9.69□□□□□ -0.86
USP41-204ENST00000486536 PODXL2Q9NZ53 605 aa9.69□□□□□ -0.86
USP41-204ENST00000486536 CEP164Q9UPV0 1460 aa9.69□□□□□ -0.86
USP41-204ENST00000486536 TOP2BQ02880 1626 aa9.68□□□□□ -0.86
USP41-204ENST00000486536 MAP3K7O43318 606 aa9.68□□□□□ -0.86
USP41-204ENST00000486536 SLC34A2O95436 690 aa9.68□□□□□ -0.86
USP41-204ENST00000486536 EN1Q05925 392 aaPredicted RBP9.68□□□□□ -0.86
USP41-204ENST00000486536 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
USP41-204ENST00000486536 KIF21AQ7Z4S6 1674 aa9.67□□□□□ -0.86
USP41-204ENST00000486536 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
USP41-204ENST00000486536 CUX1P39880 1505 aa9.67□□□□□ -0.86
USP41-204ENST00000486536 A6NJR5 290 aa9.67□□□□□ -0.86
USP41-204ENST00000486536 MDM2Q00987 491 aaPredicted RBP9.67□□□□□ -0.86
USP41-204ENST00000486536 PELP1Q8IZL8 1130 aaKnown RBP9.67□□□□□ -0.86
USP41-204ENST00000486536 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
USP41-204ENST00000486536 GPCPD1Q9NPB8 672 aa9.67□□□□□ -0.86
USP41-204ENST00000486536 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
USP41-204ENST00000486536 EEA1Q15075 1411 aa9.65□□□□□ -0.86
USP41-204ENST00000486536 BIVM-ERCC5R4GMW8 1640 aa9.65□□□□□ -0.86
USP41-204ENST00000486536 SKIV2LQ15477 1246 aaKnown RBP9.65□□□□□ -0.86
USP41-204ENST00000486536 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
USP41-204ENST00000486536 PHOX2BQ99453 314 aa9.65□□□□□ -0.86
USP41-204ENST00000486536 TRAK2O60296 914 aa9.64□□□□□ -0.87
USP41-204ENST00000486536 PCDHGA10Q9Y5H3 936 aa9.64□□□□□ -0.87
USP41-204ENST00000486536 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
USP41-204ENST00000486536 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
USP41-204ENST00000486536 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
USP41-204ENST00000486536 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
USP41-204ENST00000486536 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
USP41-204ENST00000486536 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
USP41-204ENST00000486536 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
USP41-204ENST00000486536 GABBR2O75899 941 aa9.61□□□□□ -0.87
USP41-204ENST00000486536 SLC39A7Q92504 469 aa9.61□□□□□ -0.87
USP41-204ENST00000486536 DCBLD2Q96PD2 775 aa9.61□□□□□ -0.87
USP41-204ENST00000486536 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
USP41-204ENST00000486536 ATP1B4Q9UN42 357 aaPredicted RBP9.61□□□□□ -0.87
USP41-204ENST00000486536 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
USP41-204ENST00000486536 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
USP41-204ENST00000486536 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
USP41-204ENST00000486536 OATP04181 439 aa9.6□□□□□ -0.87
USP41-204ENST00000486536 MCM6Q14566 821 aa9.6□□□□□ -0.87
USP41-204ENST00000486536 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
USP41-204ENST00000486536 SOGA1O94964 1423 aa9.59□□□□□ -0.87
USP41-204ENST00000486536 C7P10643 843 aa9.59□□□□□ -0.87
USP41-204ENST00000486536 FAM161AQ3B820 660 aa9.59□□□□□ -0.87
USP41-204ENST00000486536 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
USP41-204ENST00000486536 FGD5Q6ZNL6 1462 aa9.59□□□□□ -0.87
USP41-204ENST00000486536 HRCP23327 699 aa9.58□□□□□ -0.88
USP41-204ENST00000486536 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
USP41-204ENST00000486536 FAM217BQ9NTX9 383 aaPredicted RBP9.58□□□□□ -0.88
USP41-204ENST00000486536 PCDHGA4Q9Y5G9 962 aa9.58□□□□□ -0.88
USP41-204ENST00000486536 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
USP41-204ENST00000486536 FAM9AQ8IZU1 332 aaPredicted RBP9.57□□□□□ -0.88
USP41-204ENST00000486536 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
USP41-204ENST00000486536 KIF27Q86VH2 1401 aa9.56□□□□□ -0.88
USP41-204ENST00000486536 WDR62O43379 1518 aa9.56□□□□□ -0.88
USP41-204ENST00000486536 NLRP7Q8WX94 980 aa9.56□□□□□ -0.88
USP41-204ENST00000486536 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
USP41-204ENST00000486536 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
USP41-204ENST00000486536 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
USP41-204ENST00000486536 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
USP41-204ENST00000486536 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
USP41-204ENST00000486536 ADGRG1Q9Y653 693 aa9.54□□□□□ -0.88
USP41-204ENST00000486536 RUSC2Q8N2Y8 1516 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms