RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 ST20-MTHFSA0A0A6YYL1 179 aa15.49■□□□□ 0.07
SLX4-203ENST00000486524 POLR1AO95602 1720 aaPredicted RBP15.49■□□□□ 0.07
SLX4-203ENST00000486524 UHRF1BP1Q6BDS2 1440 aa15.49■□□□□ 0.07
SLX4-203ENST00000486524 RALGAPBQ86X10 1494 aa15.48■□□□□ 0.07
SLX4-203ENST00000486524 ROCK2O75116 1388 aaKnown RBP15.47■□□□□ 0.07
SLX4-203ENST00000486524 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
SLX4-203ENST00000486524 TRAPPC8Q9Y2L5 1435 aa15.46■□□□□ 0.07
SLX4-203ENST00000486524 AFAP1Q8N556 730 aa15.46■□□□□ 0.07
SLX4-203ENST00000486524 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
SLX4-203ENST00000486524 IRX6P78412 446 aaPredicted RBP15.44■□□□□ 0.06
SLX4-203ENST00000486524 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
SLX4-203ENST00000486524 UNC13BO14795 1591 aa15.44■□□□□ 0.06
SLX4-203ENST00000486524 PLA2R1Q13018 1463 aa15.44■□□□□ 0.06
SLX4-203ENST00000486524 PLXNC1O60486 1568 aa15.43■□□□□ 0.06
SLX4-203ENST00000486524 DHX29Q7Z478 1369 aaKnown RBP15.43■□□□□ 0.06
SLX4-203ENST00000486524 NBPF1Q3BBV0 1214 aa15.43■□□□□ 0.06
SLX4-203ENST00000486524 DUOX2Q9NRD8 1548 aa15.43■□□□□ 0.06
SLX4-203ENST00000486524 SPAG9O60271 1321 aaKnown RBP15.42■□□□□ 0.06
SLX4-203ENST00000486524 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
SLX4-203ENST00000486524 ABCC1P33527 1531 aa15.41■□□□□ 0.06
SLX4-203ENST00000486524 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
SLX4-203ENST00000486524 PRAG1Q86YV5 1406 aa15.39■□□□□ 0.05
SLX4-203ENST00000486524 ERBINQ96RT1 1412 aa15.39■□□□□ 0.05
SLX4-203ENST00000486524 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
SLX4-203ENST00000486524 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
SLX4-203ENST00000486524 A2MP01023 1474 aa15.38■□□□□ 0.05
SLX4-203ENST00000486524 TSHZ2Q9NRE2 1034 aa15.37■□□□□ 0.05
SLX4-203ENST00000486524 WDR7Q9Y4E6 1490 aa15.37■□□□□ 0.05
SLX4-203ENST00000486524 TRPM1Q7Z4N2 1603 aa15.35■□□□□ 0.05
SLX4-203ENST00000486524 FANCAO15360 1455 aa15.34■□□□□ 0.05
SLX4-203ENST00000486524 ZBED9Q6R2W3 1325 aa15.34■□□□□ 0.05
SLX4-203ENST00000486524 MAGI2Q86UL8 1455 aa15.33■□□□□ 0.05
SLX4-203ENST00000486524 TMC1Q8TDI8 760 aa15.33■□□□□ 0.04
SLX4-203ENST00000486524 ZFYVE16Q7Z3T8 1539 aa15.32■□□□□ 0.04
SLX4-203ENST00000486524 KIF3BO15066 747 aa15.31■□□□□ 0.04
SLX4-203ENST00000486524 SCAPERQ9BY12 1400 aa15.31■□□□□ 0.04
SLX4-203ENST00000486524 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
SLX4-203ENST00000486524 PRKCSHP14314 528 aaPredicted RBP15.3■□□□□ 0.04
SLX4-203ENST00000486524 ADGRL1O94910 1474 aa15.29■□□□□ 0.04
SLX4-203ENST00000486524 RTEL1-TNFRSF6BF6WH68 1400 aa15.28■□□□□ 0.04
SLX4-203ENST00000486524 E9PCH4 1651 aa15.28■□□□□ 0.04
SLX4-203ENST00000486524 ATP10AO60312 1499 aa15.28■□□□□ 0.04
SLX4-203ENST00000486524 DISP3Q9P2K9 1392 aa15.28■□□□□ 0.04
SLX4-203ENST00000486524 ATP7AQ04656 1500 aa15.27■□□□□ 0.04
SLX4-203ENST00000486524 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.04
SLX4-203ENST00000486524 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.04
SLX4-203ENST00000486524 GPRASP1Q5JY77 1395 aa15.27■□□□□ 0.03
SLX4-203ENST00000486524 OSCARQ8IYS5 282 aa15.27■□□□□ 0.03
SLX4-203ENST00000486524 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.03
SLX4-203ENST00000486524 TESK2Q96S53 571 aa15.26■□□□□ 0.03
SLX4-203ENST00000486524 ABCA9Q8IUA7 1624 aa15.26■□□□□ 0.03
SLX4-203ENST00000486524 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
SLX4-203ENST00000486524 KANK1Q14678 1352 aa15.25■□□□□ 0.03
SLX4-203ENST00000486524 CC2D1BQ5T0F9 858 aaKnown RBP15.25■□□□□ 0.03
SLX4-203ENST00000486524 PRDM15P57071 1507 aaPredicted RBP15.24■□□□□ 0.03
SLX4-203ENST00000486524 RALBP1Q15311 655 aa15.24■□□□□ 0.03
SLX4-203ENST00000486524 EIF2AK4Q9P2K8 1649 aaKnown RBP15.24■□□□□ 0.03
SLX4-203ENST00000486524 TMF1P82094 1093 aa15.23■□□□□ 0.03
SLX4-203ENST00000486524 INO80Q9ULG1 1556 aaPredicted RBP15.23■□□□□ 0.03
SLX4-203ENST00000486524 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
SLX4-203ENST00000486524 PANK3Q9H999 370 aa15.22■□□□□ 0.03
SLX4-203ENST00000486524 COL17A1Q9UMD9 1497 aaPredicted RBP15.22■□□□□ 0.03
SLX4-203ENST00000486524 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
SLX4-203ENST00000486524 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
SLX4-203ENST00000486524 TRPM2O94759 1503 aa15.21■□□□□ 0.03
SLX4-203ENST00000486524 SPHKAPQ2M3C7 1700 aa15.21■□□□□ 0.02
SLX4-203ENST00000486524 CLTCL1P53675 1640 aa15.21■□□□□ 0.02
SLX4-203ENST00000486524 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
SLX4-203ENST00000486524 BRD4O60885 1362 aaPredicted RBP15.19■□□□□ 0.02
SLX4-203ENST00000486524 DEPDC5O75140 1603 aa15.19■□□□□ 0.02
SLX4-203ENST00000486524 LAMC1P11047 1609 aa15.19■□□□□ 0.02
SLX4-203ENST00000486524 PTPRTO14522 1441 aa15.18■□□□□ 0.02
SLX4-203ENST00000486524 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
SLX4-203ENST00000486524 TET3O43151 1660 aa15.18■□□□□ 0.02
SLX4-203ENST00000486524 MADDQ8WXG6 1647 aa15.18■□□□□ 0.02
SLX4-203ENST00000486524 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
SLX4-203ENST00000486524 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
SLX4-203ENST00000486524 PARD3Q8TEW0 1356 aa15.17■□□□□ 0.02
SLX4-203ENST00000486524 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
SLX4-203ENST00000486524 CEP152O94986 1710 aa15.17■□□□□ 0.02
SLX4-203ENST00000486524 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
SLX4-203ENST00000486524 PPP4R2Q9NY27 417 aa15.16■□□□□ 0.02
SLX4-203ENST00000486524 SMG6Q86US8 1419 aaKnown RBP15.16■□□□□ 0.02
SLX4-203ENST00000486524 GGT6Q6P531 493 aa15.16■□□□□ 0.02
SLX4-203ENST00000486524 CD109Q6YHK3 1445 aa15.16■□□□□ 0.02
SLX4-203ENST00000486524 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
SLX4-203ENST00000486524 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
SLX4-203ENST00000486524 LRPPRCP42704 1394 aaKnown RBP15.14■□□□□ 0.01
SLX4-203ENST00000486524 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
SLX4-203ENST00000486524 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
SLX4-203ENST00000486524 VWDEQ8N2E2 1590 aa15.13■□□□□ 0.01
SLX4-203ENST00000486524 MROH1Q8NDA8 1641 aa15.13■□□□□ 0.01
SLX4-203ENST00000486524 RBM19Q9Y4C8 960 aaKnown RBP15.13■□□□□ 0.01
SLX4-203ENST00000486524 CFAP65Q6ZU64 1925 aaKnown RBP15.12■□□□□ 0.01
SLX4-203ENST00000486524 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
SLX4-203ENST00000486524 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
SLX4-203ENST00000486524 SCAF11Q99590 1463 aaKnown RBP15.11■□□□□ 0.01
SLX4-203ENST00000486524 RAPGEF3O95398 923 aa15.11■□□□□ 0.01
SLX4-203ENST00000486524 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
SLX4-203ENST00000486524 IQGAP1P46940 1657 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms