RNA–Protein interactions for RNA: ENST00000486458.1

STAMBP-209, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-209ENST00000486458 KCTD12Q96CX2 325 aaKnown RBP13.6□□□□□ -0.23
STAMBP-209ENST00000486458 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
STAMBP-209ENST00000486458 COL9A1P20849 921 aa13.58□□□□□ -0.24
STAMBP-209ENST00000486458 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
STAMBP-209ENST00000486458 WDR70Q9NW82 654 aa13.56□□□□□ -0.24
STAMBP-209ENST00000486458 C6orf132Q5T0Z8 1188 aa13.55□□□□□ -0.24
STAMBP-209ENST00000486458 DDX12PQ92771 950 aa13.55□□□□□ -0.24
STAMBP-209ENST00000486458 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
STAMBP-209ENST00000486458 PROX2Q3B8N5 592 aa13.53□□□□□ -0.24
STAMBP-209ENST00000486458 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
STAMBP-209ENST00000486458 RABGEF1Q9UJ41 708 aa13.53□□□□□ -0.24
STAMBP-209ENST00000486458 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
STAMBP-209ENST00000486458 PLA2G2EQ9NZK7 142 aa13.49□□□□□ -0.25
STAMBP-209ENST00000486458 GOLGA8CPA6NN73 597 aa13.48□□□□□ -0.25
STAMBP-209ENST00000486458 THSD4Q6ZMP0 1018 aa13.48□□□□□ -0.25
STAMBP-209ENST00000486458 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
STAMBP-209ENST00000486458 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
STAMBP-209ENST00000486458 NBR1Q14596 966 aa13.47□□□□□ -0.25
STAMBP-209ENST00000486458 WNT2BQ93097 391 aa13.47□□□□□ -0.25
STAMBP-209ENST00000486458 PTPN5P54829 565 aa13.45□□□□□ -0.26
STAMBP-209ENST00000486458 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
STAMBP-209ENST00000486458 KIAA1468Q9P260 1216 aa13.44□□□□□ -0.26
STAMBP-209ENST00000486458 LAPTM4BQ86VI4 370 aa13.43□□□□□ -0.26
STAMBP-209ENST00000486458 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
STAMBP-209ENST00000486458 TSR1Q2NL82 804 aaKnown RBP13.42□□□□□ -0.26
STAMBP-209ENST00000486458 MAP3K7O43318 606 aa13.41□□□□□ -0.26
STAMBP-209ENST00000486458 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
STAMBP-209ENST00000486458 GRXCR2A6NFK2 248 aa13.38□□□□□ -0.27
STAMBP-209ENST00000486458 ANKK1Q8NFD2 765 aa13.37□□□□□ -0.27
STAMBP-209ENST00000486458 OSBPP22059 807 aa13.36□□□□□ -0.27
STAMBP-209ENST00000486458 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
STAMBP-209ENST00000486458 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
STAMBP-209ENST00000486458 TSKSQ9UJT2 592 aa13.34□□□□□ -0.27
STAMBP-209ENST00000486458 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
STAMBP-209ENST00000486458 SOWAHBA6NEL2 793 aa13.32□□□□□ -0.28
STAMBP-209ENST00000486458 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
STAMBP-209ENST00000486458 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
STAMBP-209ENST00000486458 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
STAMBP-209ENST00000486458 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
STAMBP-209ENST00000486458 BCAMP50895 628 aa13.3□□□□□ -0.28
STAMBP-209ENST00000486458 PRSS12P56730 875 aa13.3□□□□□ -0.28
STAMBP-209ENST00000486458 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
STAMBP-209ENST00000486458 KCNV2Q8TDN2 545 aa13.29□□□□□ -0.28
STAMBP-209ENST00000486458 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
STAMBP-209ENST00000486458 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
STAMBP-209ENST00000486458 NYAP1Q6ZVC0 841 aa13.24□□□□□ -0.29
STAMBP-209ENST00000486458 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
STAMBP-209ENST00000486458 NPDC1Q9NQX5 325 aaPredicted RBP13.22□□□□□ -0.29
STAMBP-209ENST00000486458 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
STAMBP-209ENST00000486458 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
STAMBP-209ENST00000486458 C3orf80F5H4A9 247 aa13.21□□□□□ -0.29
STAMBP-209ENST00000486458 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
STAMBP-209ENST00000486458 MLLT3P42568 568 aaPredicted RBP13.2□□□□□ -0.3
STAMBP-209ENST00000486458 TATDN2Q93075 761 aa13.2□□□□□ -0.3
STAMBP-209ENST00000486458 SMAPO00193 183 aa13.19□□□□□ -0.3
STAMBP-209ENST00000486458 ITGBL1O95965 494 aaPredicted RBP13.19□□□□□ -0.3
STAMBP-209ENST00000486458 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
STAMBP-209ENST00000486458 TTC13Q8NBP0 860 aa13.19□□□□□ -0.3
STAMBP-209ENST00000486458 TSR3Q9UJK0 312 aaKnown RBP13.19□□□□□ -0.3
STAMBP-209ENST00000486458 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
STAMBP-209ENST00000486458 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
STAMBP-209ENST00000486458 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
STAMBP-209ENST00000486458 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
STAMBP-209ENST00000486458 A0A0G2JS52 829 aa13.14□□□□□ -0.31
STAMBP-209ENST00000486458 SAMD7Q7Z3H4 446 aa13.14□□□□□ -0.31
STAMBP-209ENST00000486458 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
STAMBP-209ENST00000486458 RGS20O76081 388 aa13.12□□□□□ -0.31
STAMBP-209ENST00000486458 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
STAMBP-209ENST00000486458 PPP4CP60510 307 aa13.09□□□□□ -0.31
STAMBP-209ENST00000486458 PTGDRQ13258 359 aa13.07□□□□□ -0.32
STAMBP-209ENST00000486458 KCNC4Q03721 635 aa13.06□□□□□ -0.32
STAMBP-209ENST00000486458 SEMA3EO15041 775 aa13.05□□□□□ -0.32
STAMBP-209ENST00000486458 EYA1Q99502 592 aa13.04□□□□□ -0.32
STAMBP-209ENST00000486458 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
STAMBP-209ENST00000486458 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
STAMBP-209ENST00000486458 SWT1Q5T5J6 900 aaKnown RBP12.99□□□□□ -0.33
STAMBP-209ENST00000486458 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
STAMBP-209ENST00000486458 TESPA1A2RU30 521 aaPredicted RBP12.96□□□□□ -0.33
STAMBP-209ENST00000486458 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
STAMBP-209ENST00000486458 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
STAMBP-209ENST00000486458 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
STAMBP-209ENST00000486458 RNF40O75150 1001 aa12.94□□□□□ -0.34
STAMBP-209ENST00000486458 FCHSD2O94868 740 aa12.94□□□□□ -0.34
STAMBP-209ENST00000486458 APLP1P51693 650 aa12.94□□□□□ -0.34
STAMBP-209ENST00000486458 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
STAMBP-209ENST00000486458 RBM46Q8TBY0 533 aaKnown RBP12.93□□□□□ -0.34
STAMBP-209ENST00000486458 MTRQ99707 1265 aa12.93□□□□□ -0.34
STAMBP-209ENST00000486458 IL21Q9HBE4 155 aa12.92□□□□□ -0.34
STAMBP-209ENST00000486458 DNAJB2P25686 324 aa12.91□□□□□ -0.34
STAMBP-209ENST00000486458 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
STAMBP-209ENST00000486458 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
STAMBP-209ENST00000486458 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
STAMBP-209ENST00000486458 TMEM134Q9H6X4 195 aa12.89□□□□□ -0.35
STAMBP-209ENST00000486458 FAM161AQ3B820 660 aa12.87□□□□□ -0.35
STAMBP-209ENST00000486458 RBM26Q5T8P6 1007 aaKnown RBP12.87□□□□□ -0.35
STAMBP-209ENST00000486458 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
STAMBP-209ENST00000486458 HIC1Q14526 733 aa12.86□□□□□ -0.35
STAMBP-209ENST00000486458 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
STAMBP-209ENST00000486458 IRX2Q9BZI1 471 aaPredicted RBP12.85□□□□□ -0.35
STAMBP-209ENST00000486458 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms