RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 MFSD10Q14728 455 aa10.94□□□□□ -0.66
PHC3-211ENST00000486042 PROX2Q3B8N5 592 aa10.94□□□□□ -0.66
PHC3-211ENST00000486042 PHF14O94880 888 aa10.92□□□□□ -0.66
PHC3-211ENST00000486042 COL9A1P20849 921 aa10.92□□□□□ -0.66
PHC3-211ENST00000486042 BCAMP50895 628 aa10.92□□□□□ -0.66
PHC3-211ENST00000486042 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
PHC3-211ENST00000486042 KCNC4Q03721 635 aa10.9□□□□□ -0.66
PHC3-211ENST00000486042 Q6ZNB5 142 aa10.9□□□□□ -0.66
PHC3-211ENST00000486042 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
PHC3-211ENST00000486042 EMILIN3Q9NT22 766 aa10.89□□□□□ -0.67
PHC3-211ENST00000486042 KIAA1468Q9P260 1216 aa10.89□□□□□ -0.67
PHC3-211ENST00000486042 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
PHC3-211ENST00000486042 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
PHC3-211ENST00000486042 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
PHC3-211ENST00000486042 EPAS1Q99814 870 aa10.85□□□□□ -0.67
PHC3-211ENST00000486042 C6orf132Q5T0Z8 1188 aa10.84□□□□□ -0.67
PHC3-211ENST00000486042 FAM98CQ17RN3 349 aaKnown RBP10.82□□□□□ -0.68
PHC3-211ENST00000486042 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
PHC3-211ENST00000486042 TRIM6-TRIM34B2RNG4 842 aa10.81□□□□□ -0.68
PHC3-211ENST00000486042 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.8□□□□□ -0.68
PHC3-211ENST00000486042 SEPT9Q9UHD8 586 aaPredicted RBP10.8□□□□□ -0.68
PHC3-211ENST00000486042 LRCH3Q96II8 777 aa10.78□□□□□ -0.68
PHC3-211ENST00000486042 HPS5Q9UPZ3 1129 aa10.76□□□□□ -0.69
PHC3-211ENST00000486042 CAMK2BQ13554 666 aa10.75□□□□□ -0.69
PHC3-211ENST00000486042 GFRA3O60609 400 aa10.74□□□□□ -0.69
PHC3-211ENST00000486042 TRAF7Q6Q0C0 670 aa10.74□□□□□ -0.69
PHC3-211ENST00000486042 PACS2Q86VP3 889 aa10.72□□□□□ -0.69
PHC3-211ENST00000486042 PPP4CP60510 307 aa10.71□□□□□ -0.69
PHC3-211ENST00000486042 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
PHC3-211ENST00000486042 DPYSL4O14531 572 aa10.69□□□□□ -0.7
PHC3-211ENST00000486042 LCE2BO14633 110 aa10.69□□□□□ -0.7
PHC3-211ENST00000486042 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
PHC3-211ENST00000486042 TJAP1Q5JTD0 557 aa10.68□□□□□ -0.7
PHC3-211ENST00000486042 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
PHC3-211ENST00000486042 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
PHC3-211ENST00000486042 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
PHC3-211ENST00000486042 DDX12PQ92771 950 aa10.65□□□□□ -0.7
PHC3-211ENST00000486042 V9GY48 417 aaPredicted RBP10.65□□□□□ -0.7
PHC3-211ENST00000486042 EN1Q05925 392 aaPredicted RBP10.64□□□□□ -0.71
PHC3-211ENST00000486042 IL21Q9HBE4 155 aa10.63□□□□□ -0.71
PHC3-211ENST00000486042 MAP3K7O43318 606 aa10.62□□□□□ -0.71
PHC3-211ENST00000486042 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
PHC3-211ENST00000486042 NBR1Q14596 966 aa10.6□□□□□ -0.71
PHC3-211ENST00000486042 TSR1Q2NL82 804 aaKnown RBP10.6□□□□□ -0.71
PHC3-211ENST00000486042 PPP1R18Q6NYC8 613 aa10.6□□□□□ -0.71
PHC3-211ENST00000486042 CERKQ8TCT0 537 aa10.6□□□□□ -0.71
PHC3-211ENST00000486042 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
PHC3-211ENST00000486042 MTRQ99707 1265 aa10.59□□□□□ -0.71
PHC3-211ENST00000486042 PRSS12P56730 875 aa10.58□□□□□ -0.72
PHC3-211ENST00000486042 PDIA6Q15084 440 aa10.57□□□□□ -0.72
PHC3-211ENST00000486042 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.57□□□□□ -0.72
PHC3-211ENST00000486042 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
PHC3-211ENST00000486042 SMAPO00193 183 aa10.55□□□□□ -0.72
PHC3-211ENST00000486042 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
PHC3-211ENST00000486042 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
PHC3-211ENST00000486042 TATDN2Q93075 761 aa10.54□□□□□ -0.72
PHC3-211ENST00000486042 ZNF787Q6DD87 383 aa10.53□□□□□ -0.72
PHC3-211ENST00000486042 FAM198AQ9UFP1 575 aa10.53□□□□□ -0.72
PHC3-211ENST00000486042 ZNF516Q92618 1163 aa10.52□□□□□ -0.73
PHC3-211ENST00000486042 PDZRN3Q9UPQ7 1066 aa10.52□□□□□ -0.73
PHC3-211ENST00000486042 DCAF8L2P0C7V8 631 aa10.51□□□□□ -0.73
PHC3-211ENST00000486042 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
PHC3-211ENST00000486042 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
PHC3-211ENST00000486042 GGCXP38435 758 aa10.5□□□□□ -0.73
PHC3-211ENST00000486042 TMUB1Q9BVT8 246 aa10.49□□□□□ -0.73
PHC3-211ENST00000486042 C3orf80F5H4A9 247 aa10.48□□□□□ -0.73
PHC3-211ENST00000486042 APLP1P51693 650 aa10.48□□□□□ -0.73
PHC3-211ENST00000486042 RBM27Q9P2N5 1060 aaKnown RBP10.48□□□□□ -0.73
PHC3-211ENST00000486042 NUDT18Q6ZVK8 323 aa10.45□□□□□ -0.74
PHC3-211ENST00000486042 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
PHC3-211ENST00000486042 RNF40O75150 1001 aa10.44□□□□□ -0.74
PHC3-211ENST00000486042 ARIH1Q9Y4X5 557 aaPredicted RBP10.44□□□□□ -0.74
PHC3-211ENST00000486042 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
PHC3-211ENST00000486042 ZNF775Q96BV0 537 aaPredicted RBP10.42□□□□□ -0.74
PHC3-211ENST00000486042 GRXCR2A6NFK2 248 aa10.41□□□□□ -0.74
PHC3-211ENST00000486042 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
PHC3-211ENST00000486042 ZPR1O75312 459 aa10.39□□□□□ -0.75
PHC3-211ENST00000486042 COPS2P61201 443 aa10.39□□□□□ -0.75
PHC3-211ENST00000486042 E2F4Q16254 413 aa10.39□□□□□ -0.75
PHC3-211ENST00000486042 TTC13Q8NBP0 860 aa10.39□□□□□ -0.75
PHC3-211ENST00000486042 OSBPP22059 807 aa10.38□□□□□ -0.75
PHC3-211ENST00000486042 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
PHC3-211ENST00000486042 SWT1Q5T5J6 900 aaKnown RBP10.37□□□□□ -0.75
PHC3-211ENST00000486042 PRR14Q9BWN1 585 aa10.37□□□□□ -0.75
PHC3-211ENST00000486042 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
PHC3-211ENST00000486042 SLC19A1P41440 591 aa10.35□□□□□ -0.75
PHC3-211ENST00000486042 BBXQ8WY36 941 aaPredicted RBP10.35□□□□□ -0.75
PHC3-211ENST00000486042 DGAT1O75907 488 aa10.34□□□□□ -0.75
PHC3-211ENST00000486042 TRIM67Q6ZTA4 783 aa10.34□□□□□ -0.75
PHC3-211ENST00000486042 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
PHC3-211ENST00000486042 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
PHC3-211ENST00000486042 NPDC1Q9NQX5 325 aaPredicted RBP10.32□□□□□ -0.76
PHC3-211ENST00000486042 PCDHB3Q9Y5E6 796 aa10.32□□□□□ -0.76
PHC3-211ENST00000486042 PRR20EP86478 221 aa10.31□□□□□ -0.76
PHC3-211ENST00000486042 PRR20CP86479 221 aa10.31□□□□□ -0.76
PHC3-211ENST00000486042 PRR20DP86480 221 aa10.31□□□□□ -0.76
PHC3-211ENST00000486042 PRR20BP86481 221 aa10.31□□□□□ -0.76
PHC3-211ENST00000486042 PRR20AP86496 221 aa10.31□□□□□ -0.76
PHC3-211ENST00000486042 MYT1Q01538 1121 aa10.31□□□□□ -0.76
PHC3-211ENST00000486042 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms