RNA–Protein interactions for RNA: ENST00000485535.5

PLXNB1-218, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,264 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-218ENST00000485535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.24
PLXNB1-218ENST00000485535 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
PLXNB1-218ENST00000485535 ARID4BQ4LE39 1312 aaPredicted RBP16.56■□□□□ 0.24
PLXNB1-218ENST00000485535 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
PLXNB1-218ENST00000485535 NUP155O75694 1391 aa16.55■□□□□ 0.24
PLXNB1-218ENST00000485535 KIF15Q9NS87 1388 aa16.54■□□□□ 0.24
PLXNB1-218ENST00000485535 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
PLXNB1-218ENST00000485535 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
PLXNB1-218ENST00000485535 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
PLXNB1-218ENST00000485535 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
PLXNB1-218ENST00000485535 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
PLXNB1-218ENST00000485535 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
PLXNB1-218ENST00000485535 PZPP20742 1482 aa16.53■□□□□ 0.24
PLXNB1-218ENST00000485535 CAMSAP2Q08AD1 1489 aa16.52■□□□□ 0.23
PLXNB1-218ENST00000485535 MYBBP1AQ9BQG0 1328 aaKnown RBP16.51■□□□□ 0.23
PLXNB1-218ENST00000485535 RALBP1Q15311 655 aa16.51■□□□□ 0.23
PLXNB1-218ENST00000485535 ANKRD50Q9ULJ7 1429 aa16.5■□□□□ 0.23
PLXNB1-218ENST00000485535 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
PLXNB1-218ENST00000485535 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
PLXNB1-218ENST00000485535 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
PLXNB1-218ENST00000485535 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
PLXNB1-218ENST00000485535 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
PLXNB1-218ENST00000485535 PLCH2O75038 1416 aa16.49■□□□□ 0.23
PLXNB1-218ENST00000485535 PREX2Q70Z35 1606 aa16.49■□□□□ 0.23
PLXNB1-218ENST00000485535 ARHGAP5Q13017 1502 aa16.48■□□□□ 0.23
PLXNB1-218ENST00000485535 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
PLXNB1-218ENST00000485535 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
PLXNB1-218ENST00000485535 POLR1AO95602 1720 aaPredicted RBP16.48■□□□□ 0.23
PLXNB1-218ENST00000485535 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
PLXNB1-218ENST00000485535 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
PLXNB1-218ENST00000485535 RGL3Q3MIN7 710 aa16.46■□□□□ 0.23
PLXNB1-218ENST00000485535 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
PLXNB1-218ENST00000485535 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
PLXNB1-218ENST00000485535 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
PLXNB1-218ENST00000485535 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
PLXNB1-218ENST00000485535 CD109Q6YHK3 1445 aa16.43■□□□□ 0.22
PLXNB1-218ENST00000485535 MBD5Q9P267 1494 aa16.43■□□□□ 0.22
PLXNB1-218ENST00000485535 FAM69CQ0P6D2 419 aa16.43■□□□□ 0.22
PLXNB1-218ENST00000485535 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
PLXNB1-218ENST00000485535 CC2D1BQ5T0F9 858 aaKnown RBP16.42■□□□□ 0.22
PLXNB1-218ENST00000485535 LAS1LQ9Y4W2 734 aaKnown RBP16.42■□□□□ 0.22
PLXNB1-218ENST00000485535 ARAP3Q8WWN8 1544 aa16.42■□□□□ 0.22
PLXNB1-218ENST00000485535 RALGAPBQ86X10 1494 aa16.42■□□□□ 0.22
PLXNB1-218ENST00000485535 SAMD9LQ8IVG5 1584 aa16.41■□□□□ 0.22
PLXNB1-218ENST00000485535 KDM5CP41229 1560 aa16.41■□□□□ 0.22
PLXNB1-218ENST00000485535 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
PLXNB1-218ENST00000485535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.225e-9■□□□□ 11.3
PLXNB1-218ENST00000485535 PDE4AP27815 886 aa16.4■□□□□ 0.22
PLXNB1-218ENST00000485535 FANCAO15360 1455 aa16.39■□□□□ 0.21
PLXNB1-218ENST00000485535 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
PLXNB1-218ENST00000485535 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
PLXNB1-218ENST00000485535 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
PLXNB1-218ENST00000485535 GLI2P10070 1586 aa16.39■□□□□ 0.21
PLXNB1-218ENST00000485535 ADGBQ8N7X0 1667 aa16.38■□□□□ 0.21
PLXNB1-218ENST00000485535 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
PLXNB1-218ENST00000485535 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
PLXNB1-218ENST00000485535 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
PLXNB1-218ENST00000485535 PLIN1O60240 522 aa16.37■□□□□ 0.21
PLXNB1-218ENST00000485535 NEFMP07197 916 aa16.37■□□□□ 0.21
PLXNB1-218ENST00000485535 CDCA7LQ96GN5 454 aa16.37■□□□□ 0.21
PLXNB1-218ENST00000485535 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
PLXNB1-218ENST00000485535 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
PLXNB1-218ENST00000485535 SYCP2Q9BX26 1530 aa16.36■□□□□ 0.21
PLXNB1-218ENST00000485535 ARHGEF5Q12774 1597 aa16.35■□□□□ 0.21
PLXNB1-218ENST00000485535 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
PLXNB1-218ENST00000485535 CCDC141Q6ZP82 1450 aa16.33■□□□□ 0.21
PLXNB1-218ENST00000485535 ABCC1P33527 1531 aa16.33■□□□□ 0.2
PLXNB1-218ENST00000485535 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.2
PLXNB1-218ENST00000485535 MS4A1P11836 297 aa16.32■□□□□ 0.2
PLXNB1-218ENST00000485535 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
PLXNB1-218ENST00000485535 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
PLXNB1-218ENST00000485535 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
PLXNB1-218ENST00000485535 BACH2Q9BYV9 841 aa16.32■□□□□ 0.2
PLXNB1-218ENST00000485535 SCAPERQ9BY12 1400 aa16.31■□□□□ 0.2
PLXNB1-218ENST00000485535 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
PLXNB1-218ENST00000485535 CFAP74Q9C0B2 1584 aa16.31■□□□□ 0.2
PLXNB1-218ENST00000485535 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
PLXNB1-218ENST00000485535 PANK3Q9H999 370 aa16.31■□□□□ 0.2
PLXNB1-218ENST00000485535 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
PLXNB1-218ENST00000485535 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
PLXNB1-218ENST00000485535 TMF1P82094 1093 aa16.29■□□□□ 0.2
PLXNB1-218ENST00000485535 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
PLXNB1-218ENST00000485535 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
PLXNB1-218ENST00000485535 TRAPPC8Q9Y2L5 1435 aa16.29■□□□□ 0.2
PLXNB1-218ENST00000485535 NEO1Q92859 1461 aa16.29■□□□□ 0.2
PLXNB1-218ENST00000485535 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
PLXNB1-218ENST00000485535 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
PLXNB1-218ENST00000485535 TSPOAP1O95153 1857 aa16.28■□□□□ 0.2
PLXNB1-218ENST00000485535 PARD3Q8TEW0 1356 aa16.27■□□□□ 0.2
PLXNB1-218ENST00000485535 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
PLXNB1-218ENST00000485535 SPAG9O60271 1321 aaKnown RBP16.26■□□□□ 0.19
PLXNB1-218ENST00000485535 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
PLXNB1-218ENST00000485535 USP35Q9P2H5 1018 aa16.24■□□□□ 0.19
PLXNB1-218ENST00000485535 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
PLXNB1-218ENST00000485535 RTN4Q9NQC3 1192 aaKnown RBP16.23■□□□□ 0.19
PLXNB1-218ENST00000485535 MAST1Q9Y2H9 1570 aa16.23■□□□□ 0.19
PLXNB1-218ENST00000485535 PER1O15534 1290 aaPredicted RBP16.23■□□□□ 0.19
PLXNB1-218ENST00000485535 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.23■□□□□ 0.19
PLXNB1-218ENST00000485535 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
PLXNB1-218ENST00000485535 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms