RNA–Protein interactions for RNA: ENST00000484879.1

RB1-204, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-204ENST00000484879 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
RB1-204ENST00000484879 ONECUT3O60422 494 aaPredicted RBP12.71□□□□□ -0.37
RB1-204ENST00000484879 COL9A1P20849 921 aa12.71□□□□□ -0.37
RB1-204ENST00000484879 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
RB1-204ENST00000484879 PHF14O94880 888 aa12.7□□□□□ -0.38
RB1-204ENST00000484879 EMILIN3Q9NT22 766 aa12.7□□□□□ -0.38
RB1-204ENST00000484879 GTPBP6O43824 516 aaPredicted RBP12.69□□□□□ -0.38
RB1-204ENST00000484879 BCAMP50895 628 aa12.69□□□□□ -0.38
RB1-204ENST00000484879 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
RB1-204ENST00000484879 KCNC4Q03721 635 aa12.66□□□□□ -0.38
RB1-204ENST00000484879 KIAA1468Q9P260 1216 aa12.66□□□□□ -0.38
RB1-204ENST00000484879 Q6ZNB5 142 aa12.64□□□□□ -0.39
RB1-204ENST00000484879 EPAS1Q99814 870 aa12.62□□□□□ -0.39
RB1-204ENST00000484879 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
RB1-204ENST00000484879 LAPTM4AQ15012 233 aa12.6□□□□□ -0.39
RB1-204ENST00000484879 C6orf132Q5T0Z8 1188 aa12.6□□□□□ -0.39
RB1-204ENST00000484879 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
RB1-204ENST00000484879 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
RB1-204ENST00000484879 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
RB1-204ENST00000484879 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
RB1-204ENST00000484879 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
RB1-204ENST00000484879 LRCH3Q96II8 777 aa12.54□□□□□ -0.4
RB1-204ENST00000484879 CAMK2BQ13554 666 aa12.53□□□□□ -0.4
RB1-204ENST00000484879 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
RB1-204ENST00000484879 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
RB1-204ENST00000484879 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
RB1-204ENST00000484879 DPYSL4O14531 572 aa12.46□□□□□ -0.41
RB1-204ENST00000484879 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.41
RB1-204ENST00000484879 GFRA3O60609 400 aa12.44□□□□□ -0.42
RB1-204ENST00000484879 PPP4CP60510 307 aa12.44□□□□□ -0.42
RB1-204ENST00000484879 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
RB1-204ENST00000484879 DDX12PQ92771 950 aa12.42□□□□□ -0.42
RB1-204ENST00000484879 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
RB1-204ENST00000484879 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
RB1-204ENST00000484879 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
RB1-204ENST00000484879 LCE2BO14633 110 aa12.38□□□□□ -0.43
RB1-204ENST00000484879 MAP3K7O43318 606 aa12.37□□□□□ -0.43
RB1-204ENST00000484879 PRKD2Q9BZL6 878 aa12.37□□□□□ -0.43
RB1-204ENST00000484879 NRG2O14511 850 aaPredicted RBP12.36□□□□□ -0.43
RB1-204ENST00000484879 NBR1Q14596 966 aa12.36□□□□□ -0.43
RB1-204ENST00000484879 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
RB1-204ENST00000484879 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
RB1-204ENST00000484879 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
RB1-204ENST00000484879 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
RB1-204ENST00000484879 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
RB1-204ENST00000484879 PDIA6Q15084 440 aa12.33□□□□□ -0.44
RB1-204ENST00000484879 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
RB1-204ENST00000484879 PRSS12P56730 875 aa12.32□□□□□ -0.44
RB1-204ENST00000484879 SPDYE16A6NNV3 312 aaPredicted RBP12.31□□□□□ -0.44
RB1-204ENST00000484879 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
RB1-204ENST00000484879 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
RB1-204ENST00000484879 MTRQ99707 1265 aa12.31□□□□□ -0.44
RB1-204ENST00000484879 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
RB1-204ENST00000484879 SMAPO00193 183 aa12.27□□□□□ -0.45
RB1-204ENST00000484879 TATDN2Q93075 761 aa12.27□□□□□ -0.45
RB1-204ENST00000484879 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.27□□□□□ -0.45
RB1-204ENST00000484879 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
RB1-204ENST00000484879 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
RB1-204ENST00000484879 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
RB1-204ENST00000484879 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
RB1-204ENST00000484879 GGCXP38435 758 aa12.21□□□□□ -0.45
RB1-204ENST00000484879 ZNF516Q92618 1163 aa12.21□□□□□ -0.45
RB1-204ENST00000484879 RBM27Q9P2N5 1060 aaKnown RBP12.21□□□□□ -0.45
RB1-204ENST00000484879 PDZRN3Q9UPQ7 1066 aa12.21□□□□□ -0.45
RB1-204ENST00000484879 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
RB1-204ENST00000484879 APLP1P51693 650 aa12.19□□□□□ -0.46
RB1-204ENST00000484879 ZNF787Q6DD87 383 aa12.19□□□□□ -0.46
RB1-204ENST00000484879 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
RB1-204ENST00000484879 NUDT18Q6ZVK8 323 aa12.17□□□□□ -0.46
RB1-204ENST00000484879 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
RB1-204ENST00000484879 RNF40O75150 1001 aa12.16□□□□□ -0.46
RB1-204ENST00000484879 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
RB1-204ENST00000484879 GRXCR2A6NFK2 248 aa12.14□□□□□ -0.47
RB1-204ENST00000484879 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
RB1-204ENST00000484879 E2F4Q16254 413 aa12.13□□□□□ -0.47
RB1-204ENST00000484879 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
RB1-204ENST00000484879 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
RB1-204ENST00000484879 OSBPP22059 807 aa12.1□□□□□ -0.47
RB1-204ENST00000484879 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
RB1-204ENST00000484879 COPS2P61201 443 aa12.09□□□□□ -0.47
RB1-204ENST00000484879 TTC13Q8NBP0 860 aa12.09□□□□□ -0.47
RB1-204ENST00000484879 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
RB1-204ENST00000484879 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
RB1-204ENST00000484879 CDHR5Q9HBB8 845 aa12.08□□□□□ -0.48
RB1-204ENST00000484879 ZPR1O75312 459 aa12.07□□□□□ -0.48
RB1-204ENST00000484879 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
RB1-204ENST00000484879 SLC19A1P41440 591 aa12.02□□□□□ -0.49
RB1-204ENST00000484879 PADI6Q6TGC4 694 aa12.02□□□□□ -0.49
RB1-204ENST00000484879 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
RB1-204ENST00000484879 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
RB1-204ENST00000484879 NPDC1Q9NQX5 325 aaPredicted RBP12.01□□□□□ -0.49
RB1-204ENST00000484879 EYA1Q99502 592 aa12□□□□□ -0.49
RB1-204ENST00000484879 PCDHB3Q9Y5E6 796 aa12□□□□□ -0.49
RB1-204ENST00000484879 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
RB1-204ENST00000484879 DGAT1O75907 488 aa11.99□□□□□ -0.49
RB1-204ENST00000484879 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
RB1-204ENST00000484879 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
RB1-204ENST00000484879 PRR20EP86478 221 aa11.97□□□□□ -0.49
RB1-204ENST00000484879 PRR20CP86479 221 aa11.97□□□□□ -0.49
RB1-204ENST00000484879 PRR20DP86480 221 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms