RNA–Protein interactions for RNA: ENST00000484821.1

POLR2B-209, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-209ENST00000484821 PROX2Q3B8N5 592 aa14.29□□□□□ -0.12
POLR2B-209ENST00000484821 RABGEF1Q9UJ41 708 aa14.27□□□□□ -0.13
POLR2B-209ENST00000484821 SPRYD3Q8NCJ5 442 aa14.26□□□□□ -0.13
POLR2B-209ENST00000484821 EPAS1Q99814 870 aa14.26□□□□□ -0.13
POLR2B-209ENST00000484821 C6orf132Q5T0Z8 1188 aa14.23□□□□□ -0.13
POLR2B-209ENST00000484821 AMER1Q5JTC6 1135 aaPredicted RBP14.21□□□□□ -0.13
POLR2B-209ENST00000484821 DDX12PQ92771 950 aa14.2□□□□□ -0.14
POLR2B-209ENST00000484821 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.19□□□□□ -0.14
POLR2B-209ENST00000484821 KIAA1468Q9P260 1216 aa14.19□□□□□ -0.14
POLR2B-209ENST00000484821 ONECUT3O60422 494 aaPredicted RBP14.17□□□□□ -0.14
POLR2B-209ENST00000484821 IFFO2Q5TF58 517 aa14.17□□□□□ -0.14
POLR2B-209ENST00000484821 RBM33Q96EV2 1170 aaKnown RBP14.17□□□□□ -0.14
POLR2B-209ENST00000484821 LAPTM4BQ86VI4 370 aa14.16□□□□□ -0.14
POLR2B-209ENST00000484821 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
POLR2B-209ENST00000484821 PDIA6Q15084 440 aa14.15□□□□□ -0.14
POLR2B-209ENST00000484821 ANKK1Q8NFD2 765 aa14.15□□□□□ -0.14
POLR2B-209ENST00000484821 TRIM6-TRIM34B2RNG4 842 aa14.12□□□□□ -0.15
POLR2B-209ENST00000484821 ZFRQ96KR1 1074 aaKnown RBP14.11□□□□□ -0.15
POLR2B-209ENST00000484821 SOWAHBA6NEL2 793 aa14.1□□□□□ -0.15
POLR2B-209ENST00000484821 SPDYE16A6NNV3 312 aaPredicted RBP14.1□□□□□ -0.15
POLR2B-209ENST00000484821 BCAMP50895 628 aa14.1□□□□□ -0.15
POLR2B-209ENST00000484821 EN1Q05925 392 aaPredicted RBP14.1□□□□□ -0.15
POLR2B-209ENST00000484821 NBR1Q14596 966 aa14.1□□□□□ -0.15
POLR2B-209ENST00000484821 E2F4Q16254 413 aa14.1□□□□□ -0.15
POLR2B-209ENST00000484821 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
POLR2B-209ENST00000484821 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
POLR2B-209ENST00000484821 SEPT9Q9UHD8 586 aaPredicted RBP14.09□□□□□ -0.15
POLR2B-209ENST00000484821 TSR1Q2NL82 804 aaKnown RBP14.07□□□□□ -0.16
POLR2B-209ENST00000484821 MAP3K7O43318 606 aa14.06□□□□□ -0.16
POLR2B-209ENST00000484821 ARIH1Q9Y4X5 557 aaPredicted RBP14.06□□□□□ -0.16
POLR2B-209ENST00000484821 A0A0G2JS52 829 aa14.04□□□□□ -0.16
POLR2B-209ENST00000484821 FAM98CQ17RN3 349 aaKnown RBP14.04□□□□□ -0.16
POLR2B-209ENST00000484821 WDR70Q9NW82 654 aa14.03□□□□□ -0.16
POLR2B-209ENST00000484821 TSKSQ9UJT2 592 aa14.03□□□□□ -0.16
POLR2B-209ENST00000484821 RGS20O76081 388 aa14.02□□□□□ -0.17
POLR2B-209ENST00000484821 ITGBL1O95965 494 aaPredicted RBP14.01□□□□□ -0.17
POLR2B-209ENST00000484821 WBP1LQ9NX94 342 aa14.01□□□□□ -0.17
POLR2B-209ENST00000484821 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
POLR2B-209ENST00000484821 NYAP1Q6ZVC0 841 aa14□□□□□ -0.17
POLR2B-209ENST00000484821 PACS2Q86VP3 889 aa13.99□□□□□ -0.17
POLR2B-209ENST00000484821 GRXCR2A6NFK2 248 aa13.97□□□□□ -0.17
POLR2B-209ENST00000484821 CDCA7LQ96GN5 454 aa13.96□□□□□ -0.17
POLR2B-209ENST00000484821 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.96□□□□□ -0.17
POLR2B-209ENST00000484821 LRCH3Q96II8 777 aa13.95□□□□□ -0.18
POLR2B-209ENST00000484821 PRSS12P56730 875 aa13.94□□□□□ -0.18
POLR2B-209ENST00000484821 FAM198AQ9UFP1 575 aa13.94□□□□□ -0.18
POLR2B-209ENST00000484821 TSR3Q9UJK0 312 aaKnown RBP13.94□□□□□ -0.18
POLR2B-209ENST00000484821 OSBPP22059 807 aa13.93□□□□□ -0.18
POLR2B-209ENST00000484821 CERKQ8TCT0 537 aa13.93□□□□□ -0.18
POLR2B-209ENST00000484821 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
POLR2B-209ENST00000484821 C3orf80F5H4A9 247 aa13.89□□□□□ -0.19
POLR2B-209ENST00000484821 SMAPO00193 183 aa13.89□□□□□ -0.19
POLR2B-209ENST00000484821 KCNC4Q03721 635 aa13.87□□□□□ -0.19
POLR2B-209ENST00000484821 CDHR5Q9HBB8 845 aa13.87□□□□□ -0.19
POLR2B-209ENST00000484821 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
POLR2B-209ENST00000484821 TATDN2Q93075 761 aa13.85□□□□□ -0.19
POLR2B-209ENST00000484821 PPP4CP60510 307 aa13.83□□□□□ -0.2
POLR2B-209ENST00000484821 PNMA3Q9UL41 463 aa13.83□□□□□ -0.2
POLR2B-209ENST00000484821 NBPF26B4DH59 902 aa13.82□□□□□ -0.2
POLR2B-209ENST00000484821 IRX2Q9BZI1 471 aaPredicted RBP13.82□□□□□ -0.2
POLR2B-209ENST00000484821 RBM27Q9P2N5 1060 aaKnown RBP13.81□□□□□ -0.2
POLR2B-209ENST00000484821 NPDC1Q9NQX5 325 aaPredicted RBP13.8□□□□□ -0.2
POLR2B-209ENST00000484821 NUDT18Q6ZVK8 323 aa13.79□□□□□ -0.2
POLR2B-209ENST00000484821 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
POLR2B-209ENST00000484821 TTC13Q8NBP0 860 aa13.77□□□□□ -0.21
POLR2B-209ENST00000484821 TJAP1Q5JTD0 557 aa13.75□□□□□ -0.21
POLR2B-209ENST00000484821 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
POLR2B-209ENST00000484821 PADI6Q6TGC4 694 aa13.73□□□□□ -0.21
POLR2B-209ENST00000484821 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
POLR2B-209ENST00000484821 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
POLR2B-209ENST00000484821 KCNV2Q8TDN2 545 aa13.7□□□□□ -0.22
POLR2B-209ENST00000484821 MTRQ99707 1265 aa13.69□□□□□ -0.22
POLR2B-209ENST00000484821 RNF40O75150 1001 aa13.67□□□□□ -0.22
POLR2B-209ENST00000484821 APLP1P51693 650 aa13.66□□□□□ -0.22
POLR2B-209ENST00000484821 IL21Q9HBE4 155 aa13.66□□□□□ -0.22
POLR2B-209ENST00000484821 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
POLR2B-209ENST00000484821 EYA1Q99502 592 aa13.65□□□□□ -0.22
POLR2B-209ENST00000484821 ZNF516Q92618 1163 aa13.63□□□□□ -0.23
POLR2B-209ENST00000484821 SLF2Q8IX21 1173 aa13.61□□□□□ -0.23
POLR2B-209ENST00000484821 PTGDRQ13258 359 aa13.6□□□□□ -0.23
POLR2B-209ENST00000484821 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
POLR2B-209ENST00000484821 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
POLR2B-209ENST00000484821 Q6ZNB5 142 aa13.54□□□□□ -0.24
POLR2B-209ENST00000484821 NKX2-3Q8TAU0 364 aa13.54□□□□□ -0.24
POLR2B-209ENST00000484821 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
POLR2B-209ENST00000484821 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
POLR2B-209ENST00000484821 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.53□□□□□ -0.24
POLR2B-209ENST00000484821 COPS2P61201 443 aa13.52□□□□□ -0.25
POLR2B-209ENST00000484821 ADGRG1Q9Y653 693 aa13.51□□□□□ -0.25
POLR2B-209ENST00000484821 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
POLR2B-209ENST00000484821 DNAJB2P25686 324 aa13.5□□□□□ -0.25
POLR2B-209ENST00000484821 P3H3Q8IVL6 736 aa13.5□□□□□ -0.25
POLR2B-209ENST00000484821 SEMA3EO15041 775 aa13.49□□□□□ -0.25
POLR2B-209ENST00000484821 LAPTM4AQ15012 233 aa13.49□□□□□ -0.25
POLR2B-209ENST00000484821 RBM46Q8TBY0 533 aaKnown RBP13.49□□□□□ -0.25
POLR2B-209ENST00000484821 V9GY48 417 aaPredicted RBP13.48□□□□□ -0.25
POLR2B-209ENST00000484821 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
POLR2B-209ENST00000484821 PRR14Q9BWN1 585 aa13.47□□□□□ -0.25
POLR2B-209ENST00000484821 TMEM134Q9H6X4 195 aa13.47□□□□□ -0.25
POLR2B-209ENST00000484821 GFRA3O60609 400 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms