RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
TMEM248-206ENST00000484751 ERBINQ96RT1 1412 aa11.73□□□□□ -0.53
TMEM248-206ENST00000484751 DUOX2Q9NRD8 1548 aa11.73□□□□□ -0.53
TMEM248-206ENST00000484751 UHRF1BP1LA0JNW5 1464 aa11.72□□□□□ -0.53
TMEM248-206ENST00000484751 DHX29Q7Z478 1369 aaKnown RBP11.72□□□□□ -0.53
TMEM248-206ENST00000484751 RALBP1Q15311 655 aa11.72□□□□□ -0.53
TMEM248-206ENST00000484751 PPP4R2Q9NY27 417 aa11.72□□□□□ -0.53
TMEM248-206ENST00000484751 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
TMEM248-206ENST00000484751 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.54
TMEM248-206ENST00000484751 CHD1O14646 1710 aa11.7□□□□□ -0.54
TMEM248-206ENST00000484751 MYO5CQ9NQX4 1742 aa11.7□□□□□ -0.54
TMEM248-206ENST00000484751 CDC42BPBQ9Y5S2 1711 aa11.7□□□□□ -0.54
TMEM248-206ENST00000484751 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
TMEM248-206ENST00000484751 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
TMEM248-206ENST00000484751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.7□□□□□ -0.54
TMEM248-206ENST00000484751 ATP10AO60312 1499 aa11.7□□□□□ -0.54
TMEM248-206ENST00000484751 DCAF11Q8TEB1 546 aa11.69□□□□□ -0.54
TMEM248-206ENST00000484751 ARAP3Q8WWN8 1544 aa11.69□□□□□ -0.54
TMEM248-206ENST00000484751 PLCH2O75038 1416 aa11.69□□□□□ -0.54
TMEM248-206ENST00000484751 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
TMEM248-206ENST00000484751 BRD4O60885 1362 aaPredicted RBP11.68□□□□□ -0.54
TMEM248-206ENST00000484751 LAMC1P11047 1609 aa11.68□□□□□ -0.54
TMEM248-206ENST00000484751 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
TMEM248-206ENST00000484751 WASHC2CQ9Y4E1 1318 aa11.68□□□□□ -0.54
TMEM248-206ENST00000484751 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
TMEM248-206ENST00000484751 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
TMEM248-206ENST00000484751 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
TMEM248-206ENST00000484751 GPRASP1Q5JY77 1395 aa11.67□□□□□ -0.54
TMEM248-206ENST00000484751 TTC37Q6PGP7 1564 aa11.67□□□□□ -0.54
TMEM248-206ENST00000484751 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
TMEM248-206ENST00000484751 MAGI2Q86UL8 1455 aa11.67□□□□□ -0.54
TMEM248-206ENST00000484751 NUDCQ9Y266 331 aa11.65□□□□□ -0.54
TMEM248-206ENST00000484751 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.54
TMEM248-206ENST00000484751 RTEL1-TNFRSF6BF6WH68 1400 aa11.65□□□□□ -0.54
TMEM248-206ENST00000484751 BCORL1Q5H9F3 1711 aa11.65□□□□□ -0.54
TMEM248-206ENST00000484751 ST20-MTHFSA0A0A6YYL1 179 aa11.64□□□□□ -0.55
TMEM248-206ENST00000484751 CCDC184Q52MB2 194 aa11.64□□□□□ -0.55
TMEM248-206ENST00000484751 INSRP06213 1382 aa11.64□□□□□ -0.55
TMEM248-206ENST00000484751 SLC24A1O60721 1099 aa11.63□□□□□ -0.55
TMEM248-206ENST00000484751 ABCC1P33527 1531 aa11.63□□□□□ -0.55
TMEM248-206ENST00000484751 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
TMEM248-206ENST00000484751 TRPM1Q7Z4N2 1603 aa11.63□□□□□ -0.55
TMEM248-206ENST00000484751 CDCA8Q53HL2 280 aa11.62□□□□□ -0.55
TMEM248-206ENST00000484751 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
TMEM248-206ENST00000484751 RBM19Q9Y4C8 960 aaKnown RBP11.62□□□□□ -0.55
TMEM248-206ENST00000484751 ZMYM4Q5VZL5 1548 aa11.61□□□□□ -0.55
TMEM248-206ENST00000484751 TMF1P82094 1093 aa11.61□□□□□ -0.55
TMEM248-206ENST00000484751 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
TMEM248-206ENST00000484751 PNISRQ8TF01 805 aaKnown RBP11.61□□□□□ -0.55
TMEM248-206ENST00000484751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
TMEM248-206ENST00000484751 KANK1Q14678 1352 aa11.61□□□□□ -0.55
TMEM248-206ENST00000484751 A2MP01023 1474 aa11.61□□□□□ -0.55
TMEM248-206ENST00000484751 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
TMEM248-206ENST00000484751 PRDM15P57071 1507 aaPredicted RBP11.6□□□□□ -0.55
TMEM248-206ENST00000484751 ZCCHC11Q5TAX3 1644 aaKnown RBP11.6□□□□□ -0.55
TMEM248-206ENST00000484751 COL17A1Q9UMD9 1497 aaPredicted RBP11.6□□□□□ -0.55
TMEM248-206ENST00000484751 LRPPRCP42704 1394 aaKnown RBP11.6□□□□□ -0.55
TMEM248-206ENST00000484751 ANP32EQ9BTT0 268 aa11.6□□□□□ -0.55
TMEM248-206ENST00000484751 E9PCH4 1651 aa11.59□□□□□ -0.55
TMEM248-206ENST00000484751 PLA2R1Q13018 1463 aa11.59□□□□□ -0.55
TMEM248-206ENST00000484751 WDR7Q9Y4E6 1490 aa11.59□□□□□ -0.55
TMEM248-206ENST00000484751 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
TMEM248-206ENST00000484751 RNF123Q5XPI4 1314 aa11.58□□□□□ -0.56
TMEM248-206ENST00000484751 PARD3Q8TEW0 1356 aa11.57□□□□□ -0.56
TMEM248-206ENST00000484751 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
TMEM248-206ENST00000484751 TRPM2O94759 1503 aa11.56□□□□□ -0.56
TMEM248-206ENST00000484751 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
TMEM248-206ENST00000484751 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
TMEM248-206ENST00000484751 NEURL4Q96JN8 1562 aa11.55□□□□□ -0.56
TMEM248-206ENST00000484751 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
TMEM248-206ENST00000484751 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
TMEM248-206ENST00000484751 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
TMEM248-206ENST00000484751 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
TMEM248-206ENST00000484751 PTPRTO14522 1441 aa11.53□□□□□ -0.56
TMEM248-206ENST00000484751 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
TMEM248-206ENST00000484751 ERICH6Q7L0X2 663 aa11.53□□□□□ -0.56
TMEM248-206ENST00000484751 DEPDC5O75140 1603 aa11.51□□□□□ -0.57
TMEM248-206ENST00000484751 CCDC136Q96JN2 1154 aa11.51□□□□□ -0.57
TMEM248-206ENST00000484751 TESK2Q96S53 571 aa11.51□□□□□ -0.57
TMEM248-206ENST00000484751 TET3O43151 1660 aa11.51□□□□□ -0.57
TMEM248-206ENST00000484751 FANCAO15360 1455 aa11.51□□□□□ -0.57
TMEM248-206ENST00000484751 SCAF11Q99590 1463 aaKnown RBP11.51□□□□□ -0.57
TMEM248-206ENST00000484751 ATP7AQ04656 1500 aa11.5□□□□□ -0.57
TMEM248-206ENST00000484751 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
TMEM248-206ENST00000484751 INO80Q9ULG1 1556 aaPredicted RBP11.5□□□□□ -0.57
TMEM248-206ENST00000484751 ABCA9Q8IUA7 1624 aa11.49□□□□□ -0.57
TMEM248-206ENST00000484751 PER1O15534 1290 aaPredicted RBP11.49□□□□□ -0.57
TMEM248-206ENST00000484751 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
TMEM248-206ENST00000484751 MYT1LQ9UL68 1186 aa11.49□□□□□ -0.57
TMEM248-206ENST00000484751 MADDQ8WXG6 1647 aa11.49□□□□□ -0.57
TMEM248-206ENST00000484751 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
TMEM248-206ENST00000484751 PANK3Q9H999 370 aa11.48□□□□□ -0.57
TMEM248-206ENST00000484751 KNSTRNQ9Y448 316 aa11.48□□□□□ -0.57
TMEM248-206ENST00000484751 DISP3Q9P2K9 1392 aa11.48□□□□□ -0.57
TMEM248-206ENST00000484751 ADGRL1O94910 1474 aa11.48□□□□□ -0.57
TMEM248-206ENST00000484751 VWDEQ8N2E2 1590 aa11.48□□□□□ -0.57
TMEM248-206ENST00000484751 CEP152O94986 1710 aa11.47□□□□□ -0.57
TMEM248-206ENST00000484751 SPHKAPQ2M3C7 1700 aa11.47□□□□□ -0.57
TMEM248-206ENST00000484751 KIAA1210Q9ULL0 1709 aa11.47□□□□□ -0.57
TMEM248-206ENST00000484751 SYNMO15061 1565 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms