RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 GOLGA8CPA6NN73 597 aa10.55□□□□□ -0.72
SSBP1-211ENST00000484178 PTPN5P54829 565 aa10.55□□□□□ -0.72
SSBP1-211ENST00000484178 DPYSL4O14531 572 aa10.54□□□□□ -0.72
SSBP1-211ENST00000484178 COL9A1P20849 921 aa10.54□□□□□ -0.72
SSBP1-211ENST00000484178 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
SSBP1-211ENST00000484178 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
SSBP1-211ENST00000484178 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
SSBP1-211ENST00000484178 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.73
SSBP1-211ENST00000484178 PROX2Q3B8N5 592 aa10.51□□□□□ -0.73
SSBP1-211ENST00000484178 PDIA6Q15084 440 aa10.49□□□□□ -0.73
SSBP1-211ENST00000484178 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
SSBP1-211ENST00000484178 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
SSBP1-211ENST00000484178 SPDYE16A6NNV3 312 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-211ENST00000484178 RGS20O76081 388 aa10.47□□□□□ -0.73
SSBP1-211ENST00000484178 ANKK1Q8NFD2 765 aa10.47□□□□□ -0.73
SSBP1-211ENST00000484178 KIAA1468Q9P260 1216 aa10.46□□□□□ -0.73
SSBP1-211ENST00000484178 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
SSBP1-211ENST00000484178 NYAP1Q6ZVC0 841 aa10.45□□□□□ -0.74
SSBP1-211ENST00000484178 SOWAHBA6NEL2 793 aa10.44□□□□□ -0.74
SSBP1-211ENST00000484178 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
SSBP1-211ENST00000484178 DDX12PQ92771 950 aa10.44□□□□□ -0.74
SSBP1-211ENST00000484178 ZFRQ96KR1 1074 aaKnown RBP10.44□□□□□ -0.74
SSBP1-211ENST00000484178 E2F4Q16254 413 aa10.42□□□□□ -0.74
SSBP1-211ENST00000484178 ITGBL1O95965 494 aaPredicted RBP10.41□□□□□ -0.74
SSBP1-211ENST00000484178 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
SSBP1-211ENST00000484178 A0A0G2JS52 829 aa10.4□□□□□ -0.74
SSBP1-211ENST00000484178 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
SSBP1-211ENST00000484178 NBR1Q14596 966 aa10.39□□□□□ -0.75
SSBP1-211ENST00000484178 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
SSBP1-211ENST00000484178 BCAMP50895 628 aa10.37□□□□□ -0.75
SSBP1-211ENST00000484178 CERKQ8TCT0 537 aa10.37□□□□□ -0.75
SSBP1-211ENST00000484178 MAP3K7O43318 606 aa10.36□□□□□ -0.75
SSBP1-211ENST00000484178 TSR1Q2NL82 804 aaKnown RBP10.36□□□□□ -0.75
SSBP1-211ENST00000484178 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
SSBP1-211ENST00000484178 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
SSBP1-211ENST00000484178 WDR70Q9NW82 654 aa10.36□□□□□ -0.75
SSBP1-211ENST00000484178 SEPT9Q9UHD8 586 aaPredicted RBP10.36□□□□□ -0.75
SSBP1-211ENST00000484178 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
SSBP1-211ENST00000484178 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
SSBP1-211ENST00000484178 WBP1LQ9NX94 342 aa10.33□□□□□ -0.76
SSBP1-211ENST00000484178 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
SSBP1-211ENST00000484178 TSR3Q9UJK0 312 aaKnown RBP10.32□□□□□ -0.76
SSBP1-211ENST00000484178 PRSS12P56730 875 aa10.31□□□□□ -0.76
SSBP1-211ENST00000484178 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
SSBP1-211ENST00000484178 LRCH3Q96II8 777 aa10.31□□□□□ -0.76
SSBP1-211ENST00000484178 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
SSBP1-211ENST00000484178 OSBPP22059 807 aa10.29□□□□□ -0.76
SSBP1-211ENST00000484178 RBM27Q9P2N5 1060 aaKnown RBP10.29□□□□□ -0.76
SSBP1-211ENST00000484178 GRXCR2A6NFK2 248 aa10.27□□□□□ -0.77
SSBP1-211ENST00000484178 KCNC4Q03721 635 aa10.27□□□□□ -0.77
SSBP1-211ENST00000484178 FAM198AQ9UFP1 575 aa10.27□□□□□ -0.77
SSBP1-211ENST00000484178 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
SSBP1-211ENST00000484178 NBPF26B4DH59 902 aa10.24□□□□□ -0.77
SSBP1-211ENST00000484178 TATDN2Q93075 761 aa10.24□□□□□ -0.77
SSBP1-211ENST00000484178 PPP4CP60510 307 aa10.22□□□□□ -0.77
SSBP1-211ENST00000484178 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
SSBP1-211ENST00000484178 IRX2Q9BZI1 471 aaPredicted RBP10.22□□□□□ -0.77
SSBP1-211ENST00000484178 SAMD7Q7Z3H4 446 aa10.21□□□□□ -0.77
SSBP1-211ENST00000484178 C3orf80F5H4A9 247 aa10.2□□□□□ -0.78
SSBP1-211ENST00000484178 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
SSBP1-211ENST00000484178 PNMA3Q9UL41 463 aa10.2□□□□□ -0.78
SSBP1-211ENST00000484178 SMAPO00193 183 aa10.19□□□□□ -0.78
SSBP1-211ENST00000484178 ARHGEF1Q92888 912 aaKnown RBP10.19□□□□□ -0.78
SSBP1-211ENST00000484178 NPDC1Q9NQX5 325 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-211ENST00000484178 TJAP1Q5JTD0 557 aa10.17□□□□□ -0.78
SSBP1-211ENST00000484178 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
SSBP1-211ENST00000484178 HDGFP51858 240 aaKnown RBP10.15□□□□□ -0.78
SSBP1-211ENST00000484178 NECTIN2Q92692 538 aa10.15□□□□□ -0.78
SSBP1-211ENST00000484178 PADI6Q6TGC4 694 aa10.12□□□□□ -0.79
SSBP1-211ENST00000484178 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
SSBP1-211ENST00000484178 IL21Q9HBE4 155 aa10.11□□□□□ -0.79
SSBP1-211ENST00000484178 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
SSBP1-211ENST00000484178 EYA1Q99502 592 aa10.1□□□□□ -0.79
SSBP1-211ENST00000484178 MTRQ99707 1265 aa10.1□□□□□ -0.79
SSBP1-211ENST00000484178 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
SSBP1-211ENST00000484178 APLP1P51693 650 aa10.08□□□□□ -0.8
SSBP1-211ENST00000484178 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
SSBP1-211ENST00000484178 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
SSBP1-211ENST00000484178 PTGDRQ13258 359 aa10.06□□□□□ -0.8
SSBP1-211ENST00000484178 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
SSBP1-211ENST00000484178 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
SSBP1-211ENST00000484178 P3H3Q8IVL6 736 aa10.04□□□□□ -0.8
SSBP1-211ENST00000484178 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
SSBP1-211ENST00000484178 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
SSBP1-211ENST00000484178 PRR14Q9BWN1 585 aa10.03□□□□□ -0.8
SSBP1-211ENST00000484178 RNF40O75150 1001 aa10.02□□□□□ -0.81
SSBP1-211ENST00000484178 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.81
SSBP1-211ENST00000484178 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.01□□□□□ -0.81
SSBP1-211ENST00000484178 DNAJB2P25686 324 aa9.99□□□□□ -0.81
SSBP1-211ENST00000484178 RBM46Q8TBY0 533 aaKnown RBP9.99□□□□□ -0.81
SSBP1-211ENST00000484178 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
SSBP1-211ENST00000484178 PRKD2Q9BZL6 878 aa9.98□□□□□ -0.81
SSBP1-211ENST00000484178 TMEM134Q9H6X4 195 aa9.98□□□□□ -0.81
SSBP1-211ENST00000484178 ADGRG1Q9Y653 693 aa9.98□□□□□ -0.81
SSBP1-211ENST00000484178 Q6ZNB5 142 aa9.97□□□□□ -0.81
SSBP1-211ENST00000484178 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
SSBP1-211ENST00000484178 ZPR1O75312 459 aa9.96□□□□□ -0.82
SSBP1-211ENST00000484178 GGCXP38435 758 aa9.95□□□□□ -0.82
SSBP1-211ENST00000484178 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
SSBP1-211ENST00000484178 FCHSD2O94868 740 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms