RNA–Protein interactions for RNA: ENST00000483817.3

CBWD1-214, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-214ENST00000483817 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
CBWD1-214ENST00000483817 COL9A1P20849 921 aa11.67□□□□□ -0.54
CBWD1-214ENST00000483817 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.54
CBWD1-214ENST00000483817 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
CBWD1-214ENST00000483817 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
CBWD1-214ENST00000483817 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
CBWD1-214ENST00000483817 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
CBWD1-214ENST00000483817 ONECUT3O60422 494 aaPredicted RBP11.61□□□□□ -0.55
CBWD1-214ENST00000483817 PCDHGA10Q9Y5H3 936 aa11.6□□□□□ -0.55
CBWD1-214ENST00000483817 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
CBWD1-214ENST00000483817 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.58□□□□□ -0.56
CBWD1-214ENST00000483817 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
CBWD1-214ENST00000483817 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
CBWD1-214ENST00000483817 TJAP1Q5JTD0 557 aa11.56□□□□□ -0.56
CBWD1-214ENST00000483817 PDZRN3Q9UPQ7 1066 aa11.56□□□□□ -0.56
CBWD1-214ENST00000483817 FAM98CQ17RN3 349 aaKnown RBP11.55□□□□□ -0.56
CBWD1-214ENST00000483817 LRCH3Q96II8 777 aa11.55□□□□□ -0.56
CBWD1-214ENST00000483817 DCAF8L2P0C7V8 631 aa11.54□□□□□ -0.56
CBWD1-214ENST00000483817 PPP1R18Q6NYC8 613 aa11.54□□□□□ -0.56
CBWD1-214ENST00000483817 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
CBWD1-214ENST00000483817 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
CBWD1-214ENST00000483817 TYW1BQ6NUM6 668 aa11.51□□□□□ -0.57
CBWD1-214ENST00000483817 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
CBWD1-214ENST00000483817 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
CBWD1-214ENST00000483817 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
CBWD1-214ENST00000483817 PHF14O94880 888 aa11.47□□□□□ -0.57
CBWD1-214ENST00000483817 PDE4AP27815 886 aa11.47□□□□□ -0.57
CBWD1-214ENST00000483817 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
CBWD1-214ENST00000483817 RYDENQ9NUL5 291 aaKnown RBP11.47□□□□□ -0.57
CBWD1-214ENST00000483817 PPP4CP60510 307 aa11.45□□□□□ -0.58
CBWD1-214ENST00000483817 IL21Q9HBE4 155 aa11.45□□□□□ -0.58
CBWD1-214ENST00000483817 MTRQ99707 1265 aa11.44□□□□□ -0.58
CBWD1-214ENST00000483817 C6orf132Q5T0Z8 1188 aa11.43□□□□□ -0.58
CBWD1-214ENST00000483817 LCE2AQ5TA79 106 aaPredicted RBP11.42□□□□□ -0.58
CBWD1-214ENST00000483817 POTECB2RU33 542 aa11.39□□□□□ -0.59
CBWD1-214ENST00000483817 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
CBWD1-214ENST00000483817 TREML4Q6UXN2 200 aa11.39□□□□□ -0.59
CBWD1-214ENST00000483817 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
CBWD1-214ENST00000483817 MYT1Q01538 1121 aa11.37□□□□□ -0.59
CBWD1-214ENST00000483817 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
CBWD1-214ENST00000483817 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
CBWD1-214ENST00000483817 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
CBWD1-214ENST00000483817 EPAS1Q99814 870 aa11.36□□□□□ -0.59
CBWD1-214ENST00000483817 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
CBWD1-214ENST00000483817 DGAT1O75907 488 aa11.33□□□□□ -0.6
CBWD1-214ENST00000483817 MFSD10Q14728 455 aa11.33□□□□□ -0.6
CBWD1-214ENST00000483817 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
CBWD1-214ENST00000483817 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
CBWD1-214ENST00000483817 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
CBWD1-214ENST00000483817 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
CBWD1-214ENST00000483817 TSKSQ9UJT2 592 aa11.31□□□□□ -0.6
CBWD1-214ENST00000483817 GGCXP38435 758 aa11.3□□□□□ -0.6
CBWD1-214ENST00000483817 SAMD7Q7Z3H4 446 aa11.3□□□□□ -0.6
CBWD1-214ENST00000483817 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
CBWD1-214ENST00000483817 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
CBWD1-214ENST00000483817 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
CBWD1-214ENST00000483817 PRR20EP86478 221 aa11.24□□□□□ -0.61
CBWD1-214ENST00000483817 PRR20CP86479 221 aa11.24□□□□□ -0.61
CBWD1-214ENST00000483817 PRR20DP86480 221 aa11.24□□□□□ -0.61
CBWD1-214ENST00000483817 PRR20BP86481 221 aa11.24□□□□□ -0.61
CBWD1-214ENST00000483817 PRR20AP86496 221 aa11.24□□□□□ -0.61
CBWD1-214ENST00000483817 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
CBWD1-214ENST00000483817 LOC100996750A0A140TA64 210 aa11.23□□□□□ -0.61
CBWD1-214ENST00000483817 APLP1P51693 650 aa11.23□□□□□ -0.61
CBWD1-214ENST00000483817 KRTAP4-6Q9BYQ5 205 aa11.23□□□□□ -0.61
CBWD1-214ENST00000483817 SLC19A1P41440 591 aa11.21□□□□□ -0.61
CBWD1-214ENST00000483817 EMID1Q96A84 441 aaPredicted RBP11.21□□□□□ -0.61
CBWD1-214ENST00000483817 SMAPO00193 183 aa11.2□□□□□ -0.62
CBWD1-214ENST00000483817 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
CBWD1-214ENST00000483817 CADPS2Q86UW7 1296 aa11.19□□□□□ -0.62
CBWD1-214ENST00000483817 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
CBWD1-214ENST00000483817 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
CBWD1-214ENST00000483817 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
CBWD1-214ENST00000483817 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
CBWD1-214ENST00000483817 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
CBWD1-214ENST00000483817 WFS1O76024 890 aa11.14□□□□□ -0.63
CBWD1-214ENST00000483817 COPS2P61201 443 aa11.14□□□□□ -0.63
CBWD1-214ENST00000483817 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-214ENST00000483817 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
CBWD1-214ENST00000483817 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
CBWD1-214ENST00000483817 AAASQ9NRG9 546 aa11.14□□□□□ -0.63
CBWD1-214ENST00000483817 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
CBWD1-214ENST00000483817 ST8SIA5O15466 376 aa11.12□□□□□ -0.63
CBWD1-214ENST00000483817 WIPF1O43516 503 aa11.12□□□□□ -0.63
CBWD1-214ENST00000483817 ZPR1O75312 459 aa11.12□□□□□ -0.63
CBWD1-214ENST00000483817 DDX12PQ92771 950 aa11.12□□□□□ -0.63
CBWD1-214ENST00000483817 TATDN2Q93075 761 aa11.12□□□□□ -0.63
CBWD1-214ENST00000483817 PRSS12P56730 875 aa11.11□□□□□ -0.63
CBWD1-214ENST00000483817 GDF9O60383 454 aa11.1□□□□□ -0.63
CBWD1-214ENST00000483817 RNF40O75150 1001 aa11.1□□□□□ -0.63
CBWD1-214ENST00000483817 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
CBWD1-214ENST00000483817 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
CBWD1-214ENST00000483817 DPYSL4O14531 572 aa11.09□□□□□ -0.63
CBWD1-214ENST00000483817 MAP3K7O43318 606 aa11.09□□□□□ -0.63
CBWD1-214ENST00000483817 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
CBWD1-214ENST00000483817 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
CBWD1-214ENST00000483817 NECTIN2Q92692 538 aa11.09□□□□□ -0.63
CBWD1-214ENST00000483817 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
CBWD1-214ENST00000483817 HDGFP51858 240 aaKnown RBP11.08□□□□□ -0.64
CBWD1-214ENST00000483817 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms