RNA–Protein interactions for RNA: ENST00000483817.3

CBWD1-214, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-214ENST00000483817 AEBP2Q6ZN18 517 aaPredicted RBP31■■■□□ 2.55
CBWD1-214ENST00000483817 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
CBWD1-214ENST00000483817 SENP3Q9H4L4 574 aaPredicted RBP26.56■■□□□ 1.84
CBWD1-214ENST00000483817 PHF23Q9BUL5 403 aaPredicted RBP26.1■■□□□ 1.77
CBWD1-214ENST00000483817 FOXD1Q16676 465 aa24.87■■□□□ 1.57
CBWD1-214ENST00000483817 POTEDQ86YR6 584 aa24.48■■□□□ 1.51
CBWD1-214ENST00000483817 MSH5O43196 834 aa23.6■■□□□ 1.37
CBWD1-214ENST00000483817 PIAS4Q8N2W9 510 aaPredicted RBP23■■□□□ 1.27
CBWD1-214ENST00000483817 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
CBWD1-214ENST00000483817 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
CBWD1-214ENST00000483817 ADRA2BP18089 450 aa22.45■■□□□ 1.18
CBWD1-214ENST00000483817 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
CBWD1-214ENST00000483817 MAPK8IP2Q13387 824 aaPredicted RBP20.89■□□□□ 0.93
CBWD1-214ENST00000483817 CACNB1Q02641 598 aaPredicted RBP20.75■□□□□ 0.91
CBWD1-214ENST00000483817 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
CBWD1-214ENST00000483817 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
CBWD1-214ENST00000483817 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
CBWD1-214ENST00000483817 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
CBWD1-214ENST00000483817 C1QBPQ07021 282 aaKnown RBP19.72■□□□□ 0.75
CBWD1-214ENST00000483817 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
CBWD1-214ENST00000483817 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
CBWD1-214ENST00000483817 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
CBWD1-214ENST00000483817 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
CBWD1-214ENST00000483817 POTEHQ6S545 545 aa19.01■□□□□ 0.63
CBWD1-214ENST00000483817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
CBWD1-214ENST00000483817 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
CBWD1-214ENST00000483817 DSG3P32926 999 aa18.5■□□□□ 0.55
CBWD1-214ENST00000483817 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
CBWD1-214ENST00000483817 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
CBWD1-214ENST00000483817 CAPN15O75808 1086 aa18.36■□□□□ 0.53
CBWD1-214ENST00000483817 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
CBWD1-214ENST00000483817 ABCB7O75027 752 aa17.86■□□□□ 0.45
CBWD1-214ENST00000483817 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
CBWD1-214ENST00000483817 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
CBWD1-214ENST00000483817 APLP2Q06481 763 aa17.78■□□□□ 0.44
CBWD1-214ENST00000483817 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
CBWD1-214ENST00000483817 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
CBWD1-214ENST00000483817 CHRDL2Q6WN34 429 aa17.62■□□□□ 0.41
CBWD1-214ENST00000483817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-214ENST00000483817 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
CBWD1-214ENST00000483817 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
CBWD1-214ENST00000483817 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
CBWD1-214ENST00000483817 POLA2Q14181 598 aa17.21■□□□□ 0.35
CBWD1-214ENST00000483817 KCNA4P22459 653 aa17.17■□□□□ 0.34
CBWD1-214ENST00000483817 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
CBWD1-214ENST00000483817 PIP4P2Q8N4L2 257 aa17.02■□□□□ 0.32
CBWD1-214ENST00000483817 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
CBWD1-214ENST00000483817 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
CBWD1-214ENST00000483817 HAX1O00165 279 aa16.91■□□□□ 0.3
CBWD1-214ENST00000483817 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
CBWD1-214ENST00000483817 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
CBWD1-214ENST00000483817 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
CBWD1-214ENST00000483817 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
CBWD1-214ENST00000483817 EVX2Q03828 476 aa16.67■□□□□ 0.26
CBWD1-214ENST00000483817 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
CBWD1-214ENST00000483817 LHX8Q68G74 356 aa16.32■□□□□ 0.2
CBWD1-214ENST00000483817 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
CBWD1-214ENST00000483817 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
CBWD1-214ENST00000483817 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
CBWD1-214ENST00000483817 GABBR2O75899 941 aa16.25■□□□□ 0.19
CBWD1-214ENST00000483817 SPDYE2BA6NHP3 402 aa16.22■□□□□ 0.19
CBWD1-214ENST00000483817 SPDYE6P0CI01 402 aa16.22■□□□□ 0.19
CBWD1-214ENST00000483817 SPDYE2Q495Y8 402 aa16.22■□□□□ 0.19
CBWD1-214ENST00000483817 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
CBWD1-214ENST00000483817 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
CBWD1-214ENST00000483817 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
CBWD1-214ENST00000483817 FBLN2P98095 1184 aa16■□□□□ 0.15
CBWD1-214ENST00000483817 PLSCR2Q9NRY7 297 aa15.95■□□□□ 0.14
CBWD1-214ENST00000483817 CHADLQ6NUI6 762 aa15.92■□□□□ 0.14
CBWD1-214ENST00000483817 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
CBWD1-214ENST00000483817 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
CBWD1-214ENST00000483817 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
CBWD1-214ENST00000483817 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
CBWD1-214ENST00000483817 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
CBWD1-214ENST00000483817 ZBTB22O15209 634 aa15.79■□□□□ 0.12
CBWD1-214ENST00000483817 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
CBWD1-214ENST00000483817 CD44P16070 742 aaKnown RBP15.72■□□□□ 0.11
CBWD1-214ENST00000483817 CLCN6P51797 869 aa15.72■□□□□ 0.11
CBWD1-214ENST00000483817 FARP1Q9Y4F1 1045 aaPredicted RBP15.62■□□□□ 0.09
CBWD1-214ENST00000483817 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
CBWD1-214ENST00000483817 DCBLD2Q96PD2 775 aa15.6■□□□□ 0.09
CBWD1-214ENST00000483817 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
CBWD1-214ENST00000483817 ZNF579Q8NAF0 562 aaKnown RBP15.47■□□□□ 0.07
CBWD1-214ENST00000483817 POTEMA6NI47 508 aa15.41■□□□□ 0.06
CBWD1-214ENST00000483817 POTEB2H3BUK9 544 aa15.36■□□□□ 0.05
CBWD1-214ENST00000483817 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
CBWD1-214ENST00000483817 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
CBWD1-214ENST00000483817 GALR2O43603 387 aaPredicted RBP15.32■□□□□ 0.04
CBWD1-214ENST00000483817 PCDH10Q9P2E7 1040 aa15.23■□□□□ 0.03
CBWD1-214ENST00000483817 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
CBWD1-214ENST00000483817 PELP1Q8IZL8 1130 aaKnown RBP15.11■□□□□ 0.01
CBWD1-214ENST00000483817 PHF12Q96QT6 1004 aa15.08■□□□□ 0
CBWD1-214ENST00000483817 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
CBWD1-214ENST00000483817 POTEJP0CG39 1038 aa15.01□□□□□ -0.01
CBWD1-214ENST00000483817 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
CBWD1-214ENST00000483817 LCE2DQ5TA82 110 aaPredicted RBP14.99□□□□□ -0.01
CBWD1-214ENST00000483817 METRNQ9UJH8 293 aa14.99□□□□□ -0.01
CBWD1-214ENST00000483817 ASTLQ6HA08 431 aaPredicted RBP14.97□□□□□ -0.01
CBWD1-214ENST00000483817 MAMSTRQ6ZN01 415 aa14.95□□□□□ -0.02
CBWD1-214ENST00000483817 C7P10643 843 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms