RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 RBM33Q96EV2 1170 aaKnown RBP10.44□□□□□ -0.74
MSL3-216ENST00000483645 MAP3K7O43318 606 aa10.43□□□□□ -0.74
MSL3-216ENST00000483645 POTEEQ6S8J3 1075 aa10.43□□□□□ -0.74
MSL3-216ENST00000483645 EN1Q05925 392 aaPredicted RBP10.42□□□□□ -0.74
MSL3-216ENST00000483645 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
MSL3-216ENST00000483645 PPP1R3GB7ZBB8 358 aa10.39□□□□□ -0.75
MSL3-216ENST00000483645 SEMA3EO15041 775 aa10.39□□□□□ -0.75
MSL3-216ENST00000483645 SLC24A1O60721 1099 aa10.39□□□□□ -0.75
MSL3-216ENST00000483645 C6orf132Q5T0Z8 1188 aa10.39□□□□□ -0.75
MSL3-216ENST00000483645 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
MSL3-216ENST00000483645 STAC3Q96MF2 364 aa10.39□□□□□ -0.75
MSL3-216ENST00000483645 TK2O00142 265 aa10.38□□□□□ -0.75
MSL3-216ENST00000483645 OSBPP22059 807 aa10.38□□□□□ -0.75
MSL3-216ENST00000483645 MLLT3P42568 568 aaPredicted RBP10.38□□□□□ -0.75
MSL3-216ENST00000483645 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
MSL3-216ENST00000483645 TULP1O00294 542 aaPredicted RBP10.36□□□□□ -0.75
MSL3-216ENST00000483645 CERKQ8TCT0 537 aa10.35□□□□□ -0.75
MSL3-216ENST00000483645 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
MSL3-216ENST00000483645 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
MSL3-216ENST00000483645 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
MSL3-216ENST00000483645 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
MSL3-216ENST00000483645 COL9A1P20849 921 aa10.33□□□□□ -0.76
MSL3-216ENST00000483645 VPS9D1Q9Y2B5 631 aa10.33□□□□□ -0.76
MSL3-216ENST00000483645 MYT1LQ9UL68 1186 aa10.31□□□□□ -0.76
MSL3-216ENST00000483645 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
MSL3-216ENST00000483645 PRIM1P49642 420 aaKnown RBP10.29□□□□□ -0.76
MSL3-216ENST00000483645 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
MSL3-216ENST00000483645 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
MSL3-216ENST00000483645 PROX2Q3B8N5 592 aa10.27□□□□□ -0.77
MSL3-216ENST00000483645 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.77
MSL3-216ENST00000483645 CDHR5Q9HBB8 845 aa10.27□□□□□ -0.77
MSL3-216ENST00000483645 RABGEF1Q9UJ41 708 aa10.27□□□□□ -0.77
MSL3-216ENST00000483645 GOLGA8CPA6NN73 597 aa10.26□□□□□ -0.77
MSL3-216ENST00000483645 TRIM6-TRIM34B2RNG4 842 aa10.26□□□□□ -0.77
MSL3-216ENST00000483645 HRO43593 1189 aa10.26□□□□□ -0.77
MSL3-216ENST00000483645 PACS2Q86VP3 889 aa10.26□□□□□ -0.77
MSL3-216ENST00000483645 PRSS12P56730 875 aa10.25□□□□□ -0.77
MSL3-216ENST00000483645 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
MSL3-216ENST00000483645 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
MSL3-216ENST00000483645 KIAA1468Q9P260 1216 aa10.24□□□□□ -0.77
MSL3-216ENST00000483645 RBM26Q5T8P6 1007 aaKnown RBP10.23□□□□□ -0.77
MSL3-216ENST00000483645 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
MSL3-216ENST00000483645 BHMG1C9JSJ3 638 aaPredicted RBP10.22□□□□□ -0.77
MSL3-216ENST00000483645 FCHSD2O94868 740 aa10.22□□□□□ -0.77
MSL3-216ENST00000483645 PTGDRQ13258 359 aa10.21□□□□□ -0.77
MSL3-216ENST00000483645 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
MSL3-216ENST00000483645 LAPTM4BQ86VI4 370 aa10.2□□□□□ -0.78
MSL3-216ENST00000483645 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
MSL3-216ENST00000483645 GPIHBP1Q8IV16 184 aa10.19□□□□□ -0.78
MSL3-216ENST00000483645 NPDC1Q9NQX5 325 aaPredicted RBP10.19□□□□□ -0.78
MSL3-216ENST00000483645 PADI6Q6TGC4 694 aa10.17□□□□□ -0.78
MSL3-216ENST00000483645 HIC1Q14526 733 aa10.16□□□□□ -0.78
MSL3-216ENST00000483645 FAM98CQ17RN3 349 aaKnown RBP10.16□□□□□ -0.78
MSL3-216ENST00000483645 WNT2BQ93097 391 aa10.16□□□□□ -0.78
MSL3-216ENST00000483645 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
MSL3-216ENST00000483645 SEPT9Q9UHD8 586 aaPredicted RBP10.16□□□□□ -0.78
MSL3-216ENST00000483645 PNMA3Q9UL41 463 aa10.16□□□□□ -0.78
MSL3-216ENST00000483645 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
MSL3-216ENST00000483645 TATDN2Q93075 761 aa10.15□□□□□ -0.78
MSL3-216ENST00000483645 HDGFP51858 240 aaKnown RBP10.13□□□□□ -0.79
MSL3-216ENST00000483645 NUDT18Q6ZVK8 323 aa10.13□□□□□ -0.79
MSL3-216ENST00000483645 TTC13Q8NBP0 860 aa10.12□□□□□ -0.79
MSL3-216ENST00000483645 BCANQ96GW7 911 aa10.12□□□□□ -0.79
MSL3-216ENST00000483645 ZFRQ96KR1 1074 aaKnown RBP10.12□□□□□ -0.79
MSL3-216ENST00000483645 HCSTQ9UBK5 93 aa10.12□□□□□ -0.79
MSL3-216ENST00000483645 FAM198AQ9UFP1 575 aa10.12□□□□□ -0.79
MSL3-216ENST00000483645 SMAPO00193 183 aa10.11□□□□□ -0.79
MSL3-216ENST00000483645 GNPATO15228 680 aa10.11□□□□□ -0.79
MSL3-216ENST00000483645 LMOD2Q6P5Q4 547 aa10.1□□□□□ -0.79
MSL3-216ENST00000483645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.79
MSL3-216ENST00000483645 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
MSL3-216ENST00000483645 SLC4A3P48751 1232 aa10.08□□□□□ -0.8
MSL3-216ENST00000483645 PTPN5P54829 565 aa10.08□□□□□ -0.8
MSL3-216ENST00000483645 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
MSL3-216ENST00000483645 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
MSL3-216ENST00000483645 OATP04181 439 aa10.07□□□□□ -0.8
MSL3-216ENST00000483645 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
MSL3-216ENST00000483645 GPR37O15354 613 aa10.06□□□□□ -0.8
MSL3-216ENST00000483645 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
MSL3-216ENST00000483645 SOWAHBA6NEL2 793 aa10.05□□□□□ -0.8
MSL3-216ENST00000483645 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
MSL3-216ENST00000483645 BCAMP50895 628 aa10.04□□□□□ -0.8
MSL3-216ENST00000483645 EYA1Q99502 592 aa10.04□□□□□ -0.8
MSL3-216ENST00000483645 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
MSL3-216ENST00000483645 RNF40O75150 1001 aa10.02□□□□□ -0.81
MSL3-216ENST00000483645 FECHP22830 423 aa10.02□□□□□ -0.81
MSL3-216ENST00000483645 DNAJB2P25686 324 aa10.02□□□□□ -0.81
MSL3-216ENST00000483645 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
MSL3-216ENST00000483645 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
MSL3-216ENST00000483645 TSR3Q9UJK0 312 aaKnown RBP10.01□□□□□ -0.81
MSL3-216ENST00000483645 HPS5Q9UPZ3 1129 aa10.01□□□□□ -0.81
MSL3-216ENST00000483645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
MSL3-216ENST00000483645 PPP4CP60510 307 aa10□□□□□ -0.81
MSL3-216ENST00000483645 NYAP1Q6ZVC0 841 aa10□□□□□ -0.81
MSL3-216ENST00000483645 SLF2Q8IX21 1173 aa10□□□□□ -0.81
MSL3-216ENST00000483645 RCCD1A6NED2 376 aa9.99□□□□□ -0.81
MSL3-216ENST00000483645 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
MSL3-216ENST00000483645 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
MSL3-216ENST00000483645 METTL3Q86U44 580 aaKnown RBP9.99□□□□□ -0.81
MSL3-216ENST00000483645 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms