RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
NSMCE4A-210ENST00000483541 RGS20O76081 388 aa10.23□□□□□ -0.77
NSMCE4A-210ENST00000483541 IFFO2Q5TF58 517 aa10.21□□□□□ -0.77
NSMCE4A-210ENST00000483541 VPS9D1Q9Y2B5 631 aa10.2□□□□□ -0.78
NSMCE4A-210ENST00000483541 DDX12PQ92771 950 aa10.18□□□□□ -0.78
NSMCE4A-210ENST00000483541 KCTD12Q96CX2 325 aaKnown RBP10.18□□□□□ -0.78
NSMCE4A-210ENST00000483541 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
NSMCE4A-210ENST00000483541 PPP1R3GB7ZBB8 358 aa10.16□□□□□ -0.78
NSMCE4A-210ENST00000483541 ARHGEF1Q92888 912 aaKnown RBP10.16□□□□□ -0.78
NSMCE4A-210ENST00000483541 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
NSMCE4A-210ENST00000483541 C6orf132Q5T0Z8 1188 aa10.15□□□□□ -0.78
NSMCE4A-210ENST00000483541 BHMG1C9JSJ3 638 aaPredicted RBP10.13□□□□□ -0.79
NSMCE4A-210ENST00000483541 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
NSMCE4A-210ENST00000483541 NBR1Q14596 966 aa10.12□□□□□ -0.79
NSMCE4A-210ENST00000483541 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
NSMCE4A-210ENST00000483541 COL9A1P20849 921 aa10.11□□□□□ -0.79
NSMCE4A-210ENST00000483541 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
NSMCE4A-210ENST00000483541 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
NSMCE4A-210ENST00000483541 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
NSMCE4A-210ENST00000483541 IRX2Q9BZI1 471 aaPredicted RBP10.09□□□□□ -0.79
NSMCE4A-210ENST00000483541 NBPF3Q9H094 633 aa10.09□□□□□ -0.79
NSMCE4A-210ENST00000483541 RABGEF1Q9UJ41 708 aa10.09□□□□□ -0.79
NSMCE4A-210ENST00000483541 GRXCR2A6NFK2 248 aa10.08□□□□□ -0.8
NSMCE4A-210ENST00000483541 MAP3K7O43318 606 aa10.08□□□□□ -0.8
NSMCE4A-210ENST00000483541 A0A0G2JS52 829 aa10.06□□□□□ -0.8
NSMCE4A-210ENST00000483541 OSBPP22059 807 aa10.06□□□□□ -0.8
NSMCE4A-210ENST00000483541 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
NSMCE4A-210ENST00000483541 CERKQ8TCT0 537 aa10.06□□□□□ -0.8
NSMCE4A-210ENST00000483541 PTPN5P54829 565 aa10.05□□□□□ -0.8
NSMCE4A-210ENST00000483541 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
NSMCE4A-210ENST00000483541 GOLGA8CPA6NN73 597 aa10.03□□□□□ -0.8
NSMCE4A-210ENST00000483541 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
NSMCE4A-210ENST00000483541 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
NSMCE4A-210ENST00000483541 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
NSMCE4A-210ENST00000483541 THSD4Q6ZMP0 1018 aa10.03□□□□□ -0.8
NSMCE4A-210ENST00000483541 LAPTM4BQ86VI4 370 aa10.03□□□□□ -0.8
NSMCE4A-210ENST00000483541 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
NSMCE4A-210ENST00000483541 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
NSMCE4A-210ENST00000483541 PACS2Q86VP3 889 aa9.99□□□□□ -0.81
NSMCE4A-210ENST00000483541 PRSS12P56730 875 aa9.98□□□□□ -0.81
NSMCE4A-210ENST00000483541 WNT2BQ93097 391 aa9.98□□□□□ -0.81
NSMCE4A-210ENST00000483541 CDCA7LQ96GN5 454 aa9.97□□□□□ -0.81
NSMCE4A-210ENST00000483541 MLLT3P42568 568 aaPredicted RBP9.96□□□□□ -0.82
NSMCE4A-210ENST00000483541 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
NSMCE4A-210ENST00000483541 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
NSMCE4A-210ENST00000483541 FAM98CQ17RN3 349 aaKnown RBP9.95□□□□□ -0.82
NSMCE4A-210ENST00000483541 VSIG10Q8N0Z9 540 aa9.95□□□□□ -0.82
NSMCE4A-210ENST00000483541 ANKK1Q8NFD2 765 aa9.95□□□□□ -0.82
NSMCE4A-210ENST00000483541 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
NSMCE4A-210ENST00000483541 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
NSMCE4A-210ENST00000483541 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
NSMCE4A-210ENST00000483541 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
NSMCE4A-210ENST00000483541 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
NSMCE4A-210ENST00000483541 SOWAHBA6NEL2 793 aa9.91□□□□□ -0.82
NSMCE4A-210ENST00000483541 SEMA3EO15041 775 aa9.91□□□□□ -0.82
NSMCE4A-210ENST00000483541 ITGBL1O95965 494 aaPredicted RBP9.9□□□□□ -0.82
NSMCE4A-210ENST00000483541 TTC13Q8NBP0 860 aa9.9□□□□□ -0.82
NSMCE4A-210ENST00000483541 FAM198AQ9UFP1 575 aa9.9□□□□□ -0.82
NSMCE4A-210ENST00000483541 NBPF26B4DH59 902 aa9.89□□□□□ -0.83
NSMCE4A-210ENST00000483541 TESPA1A2RU30 521 aaPredicted RBP9.88□□□□□ -0.83
NSMCE4A-210ENST00000483541 SMYD5Q6GMV2 418 aa9.88□□□□□ -0.83
NSMCE4A-210ENST00000483541 TATDN2Q93075 761 aa9.88□□□□□ -0.83
NSMCE4A-210ENST00000483541 NYAP1Q6ZVC0 841 aa9.87□□□□□ -0.83
NSMCE4A-210ENST00000483541 PTGDRQ13258 359 aa9.86□□□□□ -0.83
NSMCE4A-210ENST00000483541 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
NSMCE4A-210ENST00000483541 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
NSMCE4A-210ENST00000483541 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.85□□□□□ -0.83
NSMCE4A-210ENST00000483541 BCAMP50895 628 aa9.84□□□□□ -0.83
NSMCE4A-210ENST00000483541 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
NSMCE4A-210ENST00000483541 NUDT18Q6ZVK8 323 aa9.84□□□□□ -0.83
NSMCE4A-210ENST00000483541 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
NSMCE4A-210ENST00000483541 SMAPO00193 183 aa9.83□□□□□ -0.84
NSMCE4A-210ENST00000483541 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
NSMCE4A-210ENST00000483541 HDGFP51858 240 aaKnown RBP9.82□□□□□ -0.84
NSMCE4A-210ENST00000483541 TSR3Q9UJK0 312 aaKnown RBP9.82□□□□□ -0.84
NSMCE4A-210ENST00000483541 FCHSD2O94868 740 aa9.81□□□□□ -0.84
NSMCE4A-210ENST00000483541 Q6ZNB5 142 aa9.81□□□□□ -0.84
NSMCE4A-210ENST00000483541 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
NSMCE4A-210ENST00000483541 SAMD7Q7Z3H4 446 aa9.79□□□□□ -0.84
NSMCE4A-210ENST00000483541 EYA1Q99502 592 aa9.79□□□□□ -0.84
NSMCE4A-210ENST00000483541 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
NSMCE4A-210ENST00000483541 PPP4CP60510 307 aa9.77□□□□□ -0.85
NSMCE4A-210ENST00000483541 HIC1Q14526 733 aa9.77□□□□□ -0.85
NSMCE4A-210ENST00000483541 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
NSMCE4A-210ENST00000483541 RBM26Q5T8P6 1007 aaKnown RBP9.76□□□□□ -0.85
NSMCE4A-210ENST00000483541 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
NSMCE4A-210ENST00000483541 NECTIN2Q92692 538 aa9.75□□□□□ -0.85
NSMCE4A-210ENST00000483541 ADGRG1Q9Y653 693 aa9.74□□□□□ -0.85
NSMCE4A-210ENST00000483541 SLC4A3P48751 1232 aa9.73□□□□□ -0.85
NSMCE4A-210ENST00000483541 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
NSMCE4A-210ENST00000483541 KCNC4Q03721 635 aa9.72□□□□□ -0.85
NSMCE4A-210ENST00000483541 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
NSMCE4A-210ENST00000483541 OATP04181 439 aa9.71□□□□□ -0.86
NSMCE4A-210ENST00000483541 DNAJB2P25686 324 aa9.71□□□□□ -0.86
NSMCE4A-210ENST00000483541 SWT1Q5T5J6 900 aaKnown RBP9.71□□□□□ -0.86
NSMCE4A-210ENST00000483541 GNPATO15228 680 aa9.7□□□□□ -0.86
NSMCE4A-210ENST00000483541 LCE2BO14633 110 aa9.69□□□□□ -0.86
NSMCE4A-210ENST00000483541 GPR37O15354 613 aa9.69□□□□□ -0.86
NSMCE4A-210ENST00000483541 TMEM134Q9H6X4 195 aa9.68□□□□□ -0.86
NSMCE4A-210ENST00000483541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms