RNA–Protein interactions for RNA: ENST00000483507.1

PLS1-209, Transcript of plastin 1, humanhuman

TSL 2

Gene PLS1, Length 749 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-209ENST00000483507 ADAM33Q9BZ11 813 aa12.99□□□□□ -0.33
PLS1-209ENST00000483507 CDHR5Q9HBB8 845 aa12.99□□□□□ -0.33
PLS1-209ENST00000483507 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
PLS1-209ENST00000483507 MMRN1Q13201 1228 aa12.97□□□□□ -0.33
PLS1-209ENST00000483507 PTGDRQ13258 359 aa12.97□□□□□ -0.33
PLS1-209ENST00000483507 EMP3P54852 163 aa12.96□□□□□ -0.33
PLS1-209ENST00000483507 HIC1Q14526 733 aa12.96□□□□□ -0.33
PLS1-209ENST00000483507 C6orf132Q5T0Z8 1188 aa12.96□□□□□ -0.33
PLS1-209ENST00000483507 ERBB3P21860 1342 aa12.95□□□□□ -0.34
PLS1-209ENST00000483507 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
PLS1-209ENST00000483507 GNPATO15228 680 aa12.94□□□□□ -0.34
PLS1-209ENST00000483507 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
PLS1-209ENST00000483507 NPDC1Q9NQX5 325 aaPredicted RBP12.93□□□□□ -0.34
PLS1-209ENST00000483507 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
PLS1-209ENST00000483507 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
PLS1-209ENST00000483507 SLC24A3Q9HC58 644 aa12.91□□□□□ -0.34
PLS1-209ENST00000483507 KRI1Q8N9T8 703 aaKnown RBP12.9□□□□□ -0.34
PLS1-209ENST00000483507 PTPREP23469 700 aa12.89□□□□□ -0.35
PLS1-209ENST00000483507 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
PLS1-209ENST00000483507 SPNS2Q8IVW8 549 aa12.88□□□□□ -0.35
PLS1-209ENST00000483507 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
PLS1-209ENST00000483507 PPP1R3GB7ZBB8 358 aa12.86□□□□□ -0.35
PLS1-209ENST00000483507 FECHP22830 423 aa12.86□□□□□ -0.35
PLS1-209ENST00000483507 MINK1Q8N4C8 1332 aaPredicted RBP12.86□□□□□ -0.35
PLS1-209ENST00000483507 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
PLS1-209ENST00000483507 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
PLS1-209ENST00000483507 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
PLS1-209ENST00000483507 COL9A1P20849 921 aa12.84□□□□□ -0.35
PLS1-209ENST00000483507 AK7Q96M32 723 aa12.84□□□□□ -0.35
PLS1-209ENST00000483507 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
PLS1-209ENST00000483507 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
PLS1-209ENST00000483507 IRF6O14896 467 aa12.81□□□□□ -0.36
PLS1-209ENST00000483507 PRSS12P56730 875 aa12.81□□□□□ -0.36
PLS1-209ENST00000483507 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
PLS1-209ENST00000483507 PBX2P40425 430 aa12.8□□□□□ -0.36
PLS1-209ENST00000483507 ZNF687Q8N1G0 1237 aa12.8□□□□□ -0.36
PLS1-209ENST00000483507 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
PLS1-209ENST00000483507 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
PLS1-209ENST00000483507 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
PLS1-209ENST00000483507 PSEN2P49810 448 aa12.77□□□□□ -0.37
PLS1-209ENST00000483507 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
PLS1-209ENST00000483507 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
PLS1-209ENST00000483507 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
PLS1-209ENST00000483507 TRIM66O15016 1216 aa12.75□□□□□ -0.37
PLS1-209ENST00000483507 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
PLS1-209ENST00000483507 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
PLS1-209ENST00000483507 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
PLS1-209ENST00000483507 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
PLS1-209ENST00000483507 ADGRG1Q9Y653 693 aa12.73□□□□□ -0.37
PLS1-209ENST00000483507 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
PLS1-209ENST00000483507 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
PLS1-209ENST00000483507 BRPF1P55201 1214 aaPredicted RBP12.71□□□□□ -0.37
PLS1-209ENST00000483507 OATP04181 439 aa12.7□□□□□ -0.38
PLS1-209ENST00000483507 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
PLS1-209ENST00000483507 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
PLS1-209ENST00000483507 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
PLS1-209ENST00000483507 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
PLS1-209ENST00000483507 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
PLS1-209ENST00000483507 PDE4DQ08499 809 aa12.69□□□□□ -0.38
PLS1-209ENST00000483507 AMHR2Q16671 573 aa12.69□□□□□ -0.38
PLS1-209ENST00000483507 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
PLS1-209ENST00000483507 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
PLS1-209ENST00000483507 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
PLS1-209ENST00000483507 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
PLS1-209ENST00000483507 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
PLS1-209ENST00000483507 LSM11P83369 360 aaKnown RBP eCLIP12.64□□□□□ -0.39
PLS1-209ENST00000483507 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
PLS1-209ENST00000483507 PHOX2BQ99453 314 aa12.64□□□□□ -0.39
PLS1-209ENST00000483507 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
PLS1-209ENST00000483507 RABGEF1Q9UJ41 708 aa12.64□□□□□ -0.39
PLS1-209ENST00000483507 VPS9D1Q9Y2B5 631 aa12.64□□□□□ -0.39
PLS1-209ENST00000483507 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
PLS1-209ENST00000483507 TATDN2Q93075 761 aa12.63□□□□□ -0.39
PLS1-209ENST00000483507 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
PLS1-209ENST00000483507 C3orf80F5H4A9 247 aa12.62□□□□□ -0.39
PLS1-209ENST00000483507 TK2O00142 265 aa12.62□□□□□ -0.39
PLS1-209ENST00000483507 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
PLS1-209ENST00000483507 EYA1Q99502 592 aa12.62□□□□□ -0.39
PLS1-209ENST00000483507 GPBP1L1Q9HC44 474 aaPredicted RBP12.61□□□□□ -0.39
PLS1-209ENST00000483507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
PLS1-209ENST00000483507 CLCN1P35523 988 aa12.59□□□□□ -0.39
PLS1-209ENST00000483507 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
PLS1-209ENST00000483507 KDM4CQ9H3R0 1056 aa12.59□□□□□ -0.39
PLS1-209ENST00000483507 SMAPO00193 183 aa12.58□□□□□ -0.4
PLS1-209ENST00000483507 RCCD1A6NED2 376 aa12.57□□□□□ -0.4
PLS1-209ENST00000483507 DNAJB2P25686 324 aa12.57□□□□□ -0.4
PLS1-209ENST00000483507 ADGRD1Q6QNK2 874 aa12.57□□□□□ -0.4
PLS1-209ENST00000483507 NLRP7Q8WX94 980 aa12.57□□□□□ -0.4
PLS1-209ENST00000483507 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
PLS1-209ENST00000483507 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
PLS1-209ENST00000483507 GIGYF2Q6Y7W6 1299 aaKnown RBP12.56□□□□□ -0.4
PLS1-209ENST00000483507 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
PLS1-209ENST00000483507 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
PLS1-209ENST00000483507 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
PLS1-209ENST00000483507 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
PLS1-209ENST00000483507 FAM98CQ17RN3 349 aaKnown RBP12.53□□□□□ -0.4
PLS1-209ENST00000483507 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
PLS1-209ENST00000483507 KRTAP3-3Q9BYR6 98 aa12.53□□□□□ -0.4
PLS1-209ENST00000483507 KRTAP3-2Q9BYR7 98 aa12.53□□□□□ -0.4
PLS1-209ENST00000483507 TMEM134Q9H6X4 195 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms