RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CCDC94Q9BW85 323 aaPredicted RBP10.02□□□□□ -0.8
COL4A5-205ENST00000483338 GTPBP4Q9BZE4 634 aaKnown RBP10.02□□□□□ -0.81
COL4A5-205ENST00000483338 R3HCC1Q9Y3T6 440 aaKnown RBP10.02□□□□□ -0.81
COL4A5-205ENST00000483338 GRIN2BQ13224 1484 aa10.01□□□□□ -0.81
COL4A5-205ENST00000483338 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-205ENST00000483338 LETM1O95202 739 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-205ENST00000483338 RGS22Q8NE09 1264 aa10.01□□□□□ -0.81
COL4A5-205ENST00000483338 ERICH3Q5RHP9 1530 aa10□□□□□ -0.81
COL4A5-205ENST00000483338 UQCRHLA0A096LP55 91 aa10□□□□□ -0.81
COL4A5-205ENST00000483338 UQCRHP07919 91 aa10□□□□□ -0.81
COL4A5-205ENST00000483338 SAMD1Q6SPF0 538 aaPredicted RBP10□□□□□ -0.81
COL4A5-205ENST00000483338 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
COL4A5-205ENST00000483338 RCAN3Q9UKA8 241 aa9.99□□□□□ -0.81
COL4A5-205ENST00000483338 RAPGEF2Q9Y4G8 1499 aa9.99□□□□□ -0.81
COL4A5-205ENST00000483338 KDM5BQ9UGL1 1544 aa9.99□□□□□ -0.81
COL4A5-205ENST00000483338 MCM4P33991 863 aa9.99□□□□□ -0.81
COL4A5-205ENST00000483338 RNF216Q9NWF9 866 aaPredicted RBP9.99□□□□□ -0.81
COL4A5-205ENST00000483338 ZSCAN30Q86W11 494 aa9.99□□□□□ -0.81
COL4A5-205ENST00000483338 USP19O94966 1318 aa9.98□□□□□ -0.81
COL4A5-205ENST00000483338 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
COL4A5-205ENST00000483338 KTN1Q86UP2 1357 aaKnown RBP9.98□□□□□ -0.81
COL4A5-205ENST00000483338 ARID3CA6NKF2 412 aa9.98□□□□□ -0.81
COL4A5-205ENST00000483338 TRAK2O60296 914 aa9.98□□□□□ -0.81
COL4A5-205ENST00000483338 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
COL4A5-205ENST00000483338 DYNC1I1O14576 645 aa9.97□□□□□ -0.81
COL4A5-205ENST00000483338 VGFO15240 615 aaPredicted RBP9.97□□□□□ -0.81
COL4A5-205ENST00000483338 DNTTIP2Q5QJE6 756 aaKnown RBP9.97□□□□□ -0.81
COL4A5-205ENST00000483338 SNAPC4Q5SXM2 1469 aa9.97□□□□□ -0.81
COL4A5-205ENST00000483338 E9PSI1 815 aa9.97□□□□□ -0.81
COL4A5-205ENST00000483338 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
COL4A5-205ENST00000483338 TMC1Q8TDI8 760 aa9.97□□□□□ -0.81
COL4A5-205ENST00000483338 KDM2BQ8NHM5 1336 aa9.97□□□□□ -0.81
COL4A5-205ENST00000483338 CDK11BP21127 795 aaKnown RBP9.97□□□□□ -0.81
COL4A5-205ENST00000483338 IRX3P78415 501 aaPredicted RBP9.96□□□□□ -0.81
COL4A5-205ENST00000483338 CCDC7Q96M83 1385 aa9.96□□□□□ -0.81
COL4A5-205ENST00000483338 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
COL4A5-205ENST00000483338 MAP3K1Q13233 1512 aa9.95□□□□□ -0.82
COL4A5-205ENST00000483338 GAS2L3Q86XJ1 694 aa9.95□□□□□ -0.82
COL4A5-205ENST00000483338 CGNQ9P2M7 1197 aaKnown RBP9.95□□□□□ -0.82
COL4A5-205ENST00000483338 PHLDB1Q86UU1 1377 aa9.95□□□□□ -0.82
COL4A5-205ENST00000483338 TAF3Q5VWG9 929 aa9.95□□□□□ -0.82
COL4A5-205ENST00000483338 PLIN1O60240 522 aa9.95□□□□□ -0.82
COL4A5-205ENST00000483338 CBX1P83916 185 aa9.95□□□□□ -0.82
COL4A5-205ENST00000483338 CRBNQ96SW2 442 aa9.95□□□□□ -0.82
COL4A5-205ENST00000483338 BECN1Q14457 450 aa9.94□□□□□ -0.82
COL4A5-205ENST00000483338 VIRMAQ69YN4 1812 aaKnown RBP9.94□□□□□ -0.82
COL4A5-205ENST00000483338 NCOA1Q15788 1441 aa9.94□□□□□ -0.82
COL4A5-205ENST00000483338 MYOM3Q5VTT5 1437 aa9.94□□□□□ -0.82
COL4A5-205ENST00000483338 JPH4Q96JJ6 628 aa9.94□□□□□ -0.82
COL4A5-205ENST00000483338 MSNP26038 577 aaKnown RBP9.94□□□□□ -0.82
COL4A5-205ENST00000483338 CERS3Q8IU89 383 aa9.94□□□□□ -0.82
COL4A5-205ENST00000483338 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
COL4A5-205ENST00000483338 PPP1R9BQ96SB3 815 aa9.93□□□□□ -0.82
COL4A5-205ENST00000483338 KCNG1Q9UIX4 513 aa9.93□□□□□ -0.82
COL4A5-205ENST00000483338 EIF4G2P78344 907 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL4A5-205ENST00000483338 TARBP1Q13395 1621 aaKnown RBP9.92□□□□□ -0.82
COL4A5-205ENST00000483338 CCDC173Q0VFZ6 552 aa9.92□□□□□ -0.82
COL4A5-205ENST00000483338 PNISRQ8TF01 805 aaKnown RBP9.91□□□□□ -0.82
COL4A5-205ENST00000483338 PRXQ9BXM0 1461 aa9.91□□□□□ -0.82
COL4A5-205ENST00000483338 XPCQ01831 940 aaPredicted RBP9.91□□□□□ -0.82
COL4A5-205ENST00000483338 ATP2B3Q16720 1220 aa9.91□□□□□ -0.82
COL4A5-205ENST00000483338 CENPQQ7L2Z9 268 aaPredicted RBP9.91□□□□□ -0.82
COL4A5-205ENST00000483338 HAP1P54257 671 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-205ENST00000483338 SEC24BO95487 1268 aa9.9□□□□□ -0.82
COL4A5-205ENST00000483338 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-205ENST00000483338 SLC52A1Q9NWF4 448 aa9.89□□□□□ -0.83
COL4A5-205ENST00000483338 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
COL4A5-205ENST00000483338 ABCA5Q8WWZ7 1642 aa9.89□□□□□ -0.83
COL4A5-205ENST00000483338 NLRP1Q9C000 1473 aa9.89□□□□□ -0.83
COL4A5-205ENST00000483338 IGSF3O75054 1194 aa9.89□□□□□ -0.83
COL4A5-205ENST00000483338 SLC20A2Q08357 652 aa9.89□□□□□ -0.83
COL4A5-205ENST00000483338 BCCIPQ9P287 314 aaKnown RBP eCLIP9.89□□□□□ -0.83
COL4A5-205ENST00000483338 TBC1D2Q9BYX2 928 aa9.88□□□□□ -0.83
COL4A5-205ENST00000483338 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.88□□□□□ -0.83
COL4A5-205ENST00000483338 MAGI1Q96QZ7 1491 aaPredicted RBP9.88□□□□□ -0.83
COL4A5-205ENST00000483338 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
COL4A5-205ENST00000483338 CNPY4Q8N129 248 aa9.88□□□□□ -0.83
COL4A5-205ENST00000483338 SPRYD3Q8NCJ5 442 aa9.88□□□□□ -0.83
COL4A5-205ENST00000483338 SYNJ2O15056 1496 aa9.87□□□□□ -0.83
COL4A5-205ENST00000483338 C20orf194Q5TEA3 1177 aa9.87□□□□□ -0.83
COL4A5-205ENST00000483338 AEBP1Q8IUX7 1158 aa9.87□□□□□ -0.83
COL4A5-205ENST00000483338 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
COL4A5-205ENST00000483338 JARID2Q92833 1246 aaPredicted RBP9.87□□□□□ -0.83
COL4A5-205ENST00000483338 PANK3Q9H999 370 aa9.87□□□□□ -0.83
COL4A5-205ENST00000483338 DHX29Q7Z478 1369 aaKnown RBP9.87□□□□□ -0.83
COL4A5-205ENST00000483338 MMP14P50281 582 aa9.87□□□□□ -0.83
COL4A5-205ENST00000483338 KIF7Q2M1P5 1343 aa9.86□□□□□ -0.83
COL4A5-205ENST00000483338 KCNJ4P48050 445 aa9.86□□□□□ -0.83
COL4A5-205ENST00000483338 NOL7Q9UMY1 257 aaKnown RBP9.86□□□□□ -0.83
COL4A5-205ENST00000483338 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
COL4A5-205ENST00000483338 DNAJC2Q99543 621 aaKnown RBP9.86□□□□□ -0.83
COL4A5-205ENST00000483338 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
COL4A5-205ENST00000483338 LRPPRCP42704 1394 aaKnown RBP9.85□□□□□ -0.83
COL4A5-205ENST00000483338 NASPP49321 788 aaPredicted RBP9.85□□□□□ -0.83
COL4A5-205ENST00000483338 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
COL4A5-205ENST00000483338 TSC1Q92574 1164 aa9.84□□□□□ -0.83
COL4A5-205ENST00000483338 CHMP4CQ96CF2 233 aa9.84□□□□□ -0.83
COL4A5-205ENST00000483338 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
COL4A5-205ENST00000483338 SOX12O15370 315 aa9.84□□□□□ -0.83
COL4A5-205ENST00000483338 PSEN1P49768 467 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms