RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
VTI1A-205ENST00000483122 USP47Q96K76 1375 aa15.57■□□□□ 0.08
VTI1A-205ENST00000483122 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
VTI1A-205ENST00000483122 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
VTI1A-205ENST00000483122 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
VTI1A-205ENST00000483122 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
VTI1A-205ENST00000483122 CRBNQ96SW2 442 aa15.55■□□□□ 0.08
VTI1A-205ENST00000483122 PKNOX2Q96KN3 472 aa15.54■□□□□ 0.08
VTI1A-205ENST00000483122 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
VTI1A-205ENST00000483122 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
VTI1A-205ENST00000483122 CYB5RLQ6IPT4 315 aa15.53■□□□□ 0.08
VTI1A-205ENST00000483122 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
VTI1A-205ENST00000483122 BRD4O60885 1362 aaPredicted RBP15.52■□□□□ 0.08
VTI1A-205ENST00000483122 KIF15Q9NS87 1388 aa15.51■□□□□ 0.07
VTI1A-205ENST00000483122 MYBBP1AQ9BQG0 1328 aaKnown RBP15.51■□□□□ 0.07
VTI1A-205ENST00000483122 KDM5CP41229 1560 aa15.51■□□□□ 0.07
VTI1A-205ENST00000483122 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
VTI1A-205ENST00000483122 ARID4BQ4LE39 1312 aaPredicted RBP15.49■□□□□ 0.07
VTI1A-205ENST00000483122 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
VTI1A-205ENST00000483122 MBD5Q9P267 1494 aa15.49■□□□□ 0.07
VTI1A-205ENST00000483122 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
VTI1A-205ENST00000483122 RRAGDQ9NQL2 400 aaPredicted RBP15.48■□□□□ 0.07
VTI1A-205ENST00000483122 C8orf34Q49A92 452 aa15.48■□□□□ 0.07
VTI1A-205ENST00000483122 ROCK2O75116 1388 aaKnown RBP15.47■□□□□ 0.07
VTI1A-205ENST00000483122 C20orf194Q5TEA3 1177 aa15.47■□□□□ 0.07
VTI1A-205ENST00000483122 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
VTI1A-205ENST00000483122 RALBP1Q15311 655 aa15.46■□□□□ 0.07
VTI1A-205ENST00000483122 FAM161AQ3B820 660 aa15.46■□□□□ 0.07
VTI1A-205ENST00000483122 ZCCHC11Q5TAX3 1644 aaKnown RBP15.46■□□□□ 0.07
VTI1A-205ENST00000483122 EPRSP07814 1512 aaKnown RBP15.45■□□□□ 0.06
VTI1A-205ENST00000483122 KIF14Q15058 1648 aa15.45■□□□□ 0.06
VTI1A-205ENST00000483122 POGKQ9P215 609 aa15.44■□□□□ 0.06
VTI1A-205ENST00000483122 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
VTI1A-205ENST00000483122 ATP10BO94823 1461 aa15.43■□□□□ 0.06
VTI1A-205ENST00000483122 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
VTI1A-205ENST00000483122 CDK13Q14004 1512 aaKnown RBP15.41■□□□□ 0.06
VTI1A-205ENST00000483122 DAPK1P53355 1430 aa15.41■□□□□ 0.06
VTI1A-205ENST00000483122 PZPP20742 1482 aa15.41■□□□□ 0.06
VTI1A-205ENST00000483122 CENPQQ7L2Z9 268 aaPredicted RBP15.4■□□□□ 0.06
VTI1A-205ENST00000483122 ROCK1Q13464 1354 aa15.4■□□□□ 0.06
VTI1A-205ENST00000483122 NLRP13Q86W25 1043 aa15.39■□□□□ 0.05
VTI1A-205ENST00000483122 E9PCH4 1651 aa15.39■□□□□ 0.05
VTI1A-205ENST00000483122 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
VTI1A-205ENST00000483122 ST20-MTHFSA0A0A6YYL1 179 aa15.38■□□□□ 0.05
VTI1A-205ENST00000483122 ARID3CA6NKF2 412 aa15.38■□□□□ 0.05
VTI1A-205ENST00000483122 RGS3P49796 1198 aa15.38■□□□□ 0.05
VTI1A-205ENST00000483122 ABCC5O15440 1437 aa15.38■□□□□ 0.05
VTI1A-205ENST00000483122 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
VTI1A-205ENST00000483122 GLIPR1L2Q4G1C9 344 aa15.37■□□□□ 0.05
VTI1A-205ENST00000483122 ZMYND15Q9H091 742 aa15.36■□□□□ 0.05
VTI1A-205ENST00000483122 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
VTI1A-205ENST00000483122 RALGAPBQ86X10 1494 aa15.36■□□□□ 0.05
VTI1A-205ENST00000483122 ZNF644Q9H582 1327 aaPredicted RBP15.35■□□□□ 0.05
VTI1A-205ENST00000483122 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
VTI1A-205ENST00000483122 ASXL2Q76L83 1435 aa15.34■□□□□ 0.05
VTI1A-205ENST00000483122 NAP1L5Q96NT1 182 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-205ENST00000483122 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-205ENST00000483122 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
VTI1A-205ENST00000483122 WDR7Q9Y4E6 1490 aa15.33■□□□□ 0.04
VTI1A-205ENST00000483122 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
VTI1A-205ENST00000483122 PLEKHD1A6NEE1 506 aa15.32■□□□□ 0.04
VTI1A-205ENST00000483122 L1TD1Q5T7N2 865 aaKnown RBP15.32■□□□□ 0.04
VTI1A-205ENST00000483122 USP19O94966 1318 aa15.32■□□□□ 0.04
VTI1A-205ENST00000483122 PKD2Q13563 968 aa15.32■□□□□ 0.04
VTI1A-205ENST00000483122 ARXQ96QS3 562 aa15.32■□□□□ 0.04
VTI1A-205ENST00000483122 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-205ENST00000483122 SLKQ9H2G2 1235 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-205ENST00000483122 ZMYM4Q5VZL5 1548 aa15.3■□□□□ 0.04
VTI1A-205ENST00000483122 KDM2AQ9Y2K7 1162 aa15.29■□□□□ 0.04
VTI1A-205ENST00000483122 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-205ENST00000483122 PER1O15534 1290 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-205ENST00000483122 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
VTI1A-205ENST00000483122 XRCC6P12956 609 aaKnown RBP eCLIP15.27■□□□□ 0.04
VTI1A-205ENST00000483122 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
VTI1A-205ENST00000483122 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.03
VTI1A-205ENST00000483122 SEC24BO95487 1268 aa15.27■□□□□ 0.03
VTI1A-205ENST00000483122 HSP90AA1P07900 732 aaKnown RBP15.26■□□□□ 0.03
VTI1A-205ENST00000483122 CLCN1P35523 988 aa15.25■□□□□ 0.03
VTI1A-205ENST00000483122 DUSP27Q5VZP5 1158 aa15.25■□□□□ 0.03
VTI1A-205ENST00000483122 PANK2Q9BZ23 570 aa15.25■□□□□ 0.03
VTI1A-205ENST00000483122 PLEKHH2Q8IVE3 1493 aa15.25■□□□□ 0.03
VTI1A-205ENST00000483122 DIP2BQ9P265 1576 aa15.25■□□□□ 0.03
VTI1A-205ENST00000483122 INSRP06213 1382 aa15.25■□□□□ 0.03
VTI1A-205ENST00000483122 ABCC10Q5T3U5 1492 aa15.24■□□□□ 0.03
VTI1A-205ENST00000483122 RRP9O43818 475 aaKnown RBP15.24■□□□□ 0.03
VTI1A-205ENST00000483122 GLI2P10070 1586 aa15.24■□□□□ 0.03
VTI1A-205ENST00000483122 ANTXR1Q9H6X2 564 aa15.23■□□□□ 0.03
VTI1A-205ENST00000483122 ABCA9Q8IUA7 1624 aa15.23■□□□□ 0.03
VTI1A-205ENST00000483122 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
VTI1A-205ENST00000483122 BECN1Q14457 450 aa15.23■□□□□ 0.03
VTI1A-205ENST00000483122 KIF13AQ9H1H9 1805 aa15.23■□□□□ 0.03
VTI1A-205ENST00000483122 ADAMTS8Q9UP79 889 aa15.22■□□□□ 0.03
VTI1A-205ENST00000483122 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
VTI1A-205ENST00000483122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.21■□□□□ 0.03
VTI1A-205ENST00000483122 FSD2A1L4K1 749 aa15.21■□□□□ 0.03
VTI1A-205ENST00000483122 IGHDP01880 384 aa15.21■□□□□ 0.02
VTI1A-205ENST00000483122 ARHGEF12Q9NZN5 1544 aa15.21■□□□□ 0.02
VTI1A-205ENST00000483122 TTC37Q6PGP7 1564 aa15.2■□□□□ 0.02
VTI1A-205ENST00000483122 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.2■□□□□ 0.02
VTI1A-205ENST00000483122 GZF1Q9H116 711 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms