RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TYW1BQ6NUM6 668 aa9.13□□□□□ -0.95
LAPTM4A-202ENST00000483117 DDX12PQ92771 950 aa9.13□□□□□ -0.95
LAPTM4A-202ENST00000483117 ZBED2Q9BTP6 218 aa9.13□□□□□ -0.95
LAPTM4A-202ENST00000483117 KRTAP4-6Q9BYQ5 205 aa9.13□□□□□ -0.95
LAPTM4A-202ENST00000483117 STAC3Q96MF2 364 aa9.12□□□□□ -0.95
LAPTM4A-202ENST00000483117 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
LAPTM4A-202ENST00000483117 TSHZ2Q9NRE2 1034 aa9.12□□□□□ -0.95
LAPTM4A-202ENST00000483117 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
LAPTM4A-202ENST00000483117 COL9A1P20849 921 aa9.1□□□□□ -0.95
LAPTM4A-202ENST00000483117 PDIA6Q15084 440 aa9.1□□□□□ -0.95
LAPTM4A-202ENST00000483117 TRAF7Q6Q0C0 670 aa9.1□□□□□ -0.95
LAPTM4A-202ENST00000483117 FBXW7Q969H0 707 aa9.1□□□□□ -0.95
LAPTM4A-202ENST00000483117 RBM33Q96EV2 1170 aaKnown RBP9.09□□□□□ -0.95
LAPTM4A-202ENST00000483117 EPAS1Q99814 870 aa9.09□□□□□ -0.95
LAPTM4A-202ENST00000483117 PPP1R3GB7ZBB8 358 aa9.08□□□□□ -0.96
LAPTM4A-202ENST00000483117 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
LAPTM4A-202ENST00000483117 PROX2Q3B8N5 592 aa9.08□□□□□ -0.96
LAPTM4A-202ENST00000483117 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
LAPTM4A-202ENST00000483117 NBR1Q14596 966 aa9.06□□□□□ -0.96
LAPTM4A-202ENST00000483117 C6orf132Q5T0Z8 1188 aa9.06□□□□□ -0.96
LAPTM4A-202ENST00000483117 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
LAPTM4A-202ENST00000483117 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
LAPTM4A-202ENST00000483117 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.97
LAPTM4A-202ENST00000483117 GOLGA8CPA6NN73 597 aa9.02□□□□□ -0.97
LAPTM4A-202ENST00000483117 EN1Q05925 392 aaPredicted RBP9.02□□□□□ -0.97
LAPTM4A-202ENST00000483117 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
LAPTM4A-202ENST00000483117 ZNF775Q96BV0 537 aaPredicted RBP9.02□□□□□ -0.97
LAPTM4A-202ENST00000483117 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
LAPTM4A-202ENST00000483117 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
LAPTM4A-202ENST00000483117 MAP3K7O43318 606 aa9.01□□□□□ -0.97
LAPTM4A-202ENST00000483117 PRIM1P49642 420 aaKnown RBP9.01□□□□□ -0.97
LAPTM4A-202ENST00000483117 PTPN5P54829 565 aa9.01□□□□□ -0.97
LAPTM4A-202ENST00000483117 LAPTM4AQ15012 233 aa9.01□□□□□ -0.97
LAPTM4A-202ENST00000483117 WNT2BQ93097 391 aa9□□□□□ -0.97
LAPTM4A-202ENST00000483117 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
LAPTM4A-202ENST00000483117 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
LAPTM4A-202ENST00000483117 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
LAPTM4A-202ENST00000483117 ZNF787Q6DD87 383 aa8.97□□□□□ -0.97
LAPTM4A-202ENST00000483117 KCNV2Q8TDN2 545 aa8.97□□□□□ -0.97
LAPTM4A-202ENST00000483117 OSBPP22059 807 aa8.96□□□□□ -0.98
LAPTM4A-202ENST00000483117 SEPT9Q9UHD8 586 aaPredicted RBP8.96□□□□□ -0.98
LAPTM4A-202ENST00000483117 ONECUT3O60422 494 aaPredicted RBP8.95□□□□□ -0.98
LAPTM4A-202ENST00000483117 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
LAPTM4A-202ENST00000483117 TSKSQ9UJT2 592 aa8.95□□□□□ -0.98
LAPTM4A-202ENST00000483117 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
LAPTM4A-202ENST00000483117 LAPTM4BQ86VI4 370 aa8.93□□□□□ -0.98
LAPTM4A-202ENST00000483117 ARHGEF1Q92888 912 aaKnown RBP8.93□□□□□ -0.98
LAPTM4A-202ENST00000483117 BCAMP50895 628 aa8.92□□□□□ -0.98
LAPTM4A-202ENST00000483117 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
LAPTM4A-202ENST00000483117 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
LAPTM4A-202ENST00000483117 MLLT3P42568 568 aaPredicted RBP8.91□□□□□ -0.98
LAPTM4A-202ENST00000483117 CDCA7LQ96GN5 454 aa8.91□□□□□ -0.98
LAPTM4A-202ENST00000483117 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
LAPTM4A-202ENST00000483117 GFRA3O60609 400 aa8.9□□□□□ -0.98
LAPTM4A-202ENST00000483117 PRSS12P56730 875 aa8.9□□□□□ -0.98
LAPTM4A-202ENST00000483117 FAM98CQ17RN3 349 aaKnown RBP8.89□□□□□ -0.99
LAPTM4A-202ENST00000483117 PACS2Q86VP3 889 aa8.89□□□□□ -0.99
LAPTM4A-202ENST00000483117 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
LAPTM4A-202ENST00000483117 SMAPO00193 183 aa8.88□□□□□ -0.99
LAPTM4A-202ENST00000483117 CERKQ8TCT0 537 aa8.88□□□□□ -0.99
LAPTM4A-202ENST00000483117 C3orf80F5H4A9 247 aa8.87□□□□□ -0.99
LAPTM4A-202ENST00000483117 NPDC1Q9NQX5 325 aaPredicted RBP8.85□□□□□ -0.99
LAPTM4A-202ENST00000483117 HAP1P54257 671 aaPredicted RBP8.84□□□□□ -0.99
LAPTM4A-202ENST00000483117 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
LAPTM4A-202ENST00000483117 TATDN2Q93075 761 aa8.84□□□□□ -0.99
LAPTM4A-202ENST00000483117 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
LAPTM4A-202ENST00000483117 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
LAPTM4A-202ENST00000483117 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
LAPTM4A-202ENST00000483117 LRCH3Q96II8 777 aa8.83□□□□□ -1
LAPTM4A-202ENST00000483117 NBPF26B4DH59 902 aa8.82□□□□□ -1
LAPTM4A-202ENST00000483117 SEMA3EO15041 775 aa8.82□□□□□ -1
LAPTM4A-202ENST00000483117 PADI6Q6TGC4 694 aa8.82□□□□□ -1
LAPTM4A-202ENST00000483117 NUDT18Q6ZVK8 323 aa8.82□□□□□ -1
LAPTM4A-202ENST00000483117 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
LAPTM4A-202ENST00000483117 SAMD7Q7Z3H4 446 aa8.81□□□□□ -1
LAPTM4A-202ENST00000483117 RBM27Q9P2N5 1060 aaKnown RBP8.8□□□□□ -1
LAPTM4A-202ENST00000483117 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
LAPTM4A-202ENST00000483117 TTC13Q8NBP0 860 aa8.79□□□□□ -1
LAPTM4A-202ENST00000483117 NUTM2FA1L443 756 aa8.76□□□□□ -1.01
LAPTM4A-202ENST00000483117 PTGDRQ13258 359 aa8.76□□□□□ -1.01
LAPTM4A-202ENST00000483117 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
LAPTM4A-202ENST00000483117 KDM2AQ9Y2K7 1162 aa8.76□□□□□ -1.01
LAPTM4A-202ENST00000483117 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
LAPTM4A-202ENST00000483117 PPP4CP60510 307 aa8.75□□□□□ -1.01
LAPTM4A-202ENST00000483117 NRG2O14511 850 aaPredicted RBP8.74□□□□□ -1.01
LAPTM4A-202ENST00000483117 RNF40O75150 1001 aa8.74□□□□□ -1.01
LAPTM4A-202ENST00000483117 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
LAPTM4A-202ENST00000483117 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
LAPTM4A-202ENST00000483117 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
LAPTM4A-202ENST00000483117 EYA1Q99502 592 aa8.72□□□□□ -1.01
LAPTM4A-202ENST00000483117 FAM161AQ3B820 660 aa8.71□□□□□ -1.02
LAPTM4A-202ENST00000483117 KCNC4Q03721 635 aa8.7□□□□□ -1.02
LAPTM4A-202ENST00000483117 RBM26Q5T8P6 1007 aaKnown RBP8.7□□□□□ -1.02
LAPTM4A-202ENST00000483117 FCHSD2O94868 740 aa8.68□□□□□ -1.02
LAPTM4A-202ENST00000483117 ADGRG1Q9Y653 693 aa8.68□□□□□ -1.02
LAPTM4A-202ENST00000483117 APLP1P51693 650 aa8.67□□□□□ -1.02
LAPTM4A-202ENST00000483117 SLF2Q8IX21 1173 aa8.66□□□□□ -1.02
LAPTM4A-202ENST00000483117 TJAP1Q5JTD0 557 aa8.65□□□□□ -1.02
LAPTM4A-202ENST00000483117 SMYD5Q6GMV2 418 aa8.65□□□□□ -1.02
LAPTM4A-202ENST00000483117 RBM46Q8TBY0 533 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms