RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 ANKK1Q8NFD2 765 aa10.77□□□□□ -0.69
RPA3-207ENST00000483031 A0A0G2JS52 829 aa10.76□□□□□ -0.69
RPA3-207ENST00000483031 COL9A1P20849 921 aa10.76□□□□□ -0.69
RPA3-207ENST00000483031 LAPTM4BQ86VI4 370 aa10.73□□□□□ -0.69
RPA3-207ENST00000483031 EPAS1Q99814 870 aa10.72□□□□□ -0.69
RPA3-207ENST00000483031 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
RPA3-207ENST00000483031 DPYSL4O14531 572 aa10.69□□□□□ -0.7
RPA3-207ENST00000483031 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
RPA3-207ENST00000483031 BCAMP50895 628 aa10.69□□□□□ -0.7
RPA3-207ENST00000483031 C6orf132Q5T0Z8 1188 aa10.69□□□□□ -0.7
RPA3-207ENST00000483031 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
RPA3-207ENST00000483031 KIAA1468Q9P260 1216 aa10.69□□□□□ -0.7
RPA3-207ENST00000483031 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
RPA3-207ENST00000483031 ITGBL1O95965 494 aaPredicted RBP10.67□□□□□ -0.7
RPA3-207ENST00000483031 NYAP1Q6ZVC0 841 aa10.67□□□□□ -0.7
RPA3-207ENST00000483031 ZFRQ96KR1 1074 aaKnown RBP10.67□□□□□ -0.7
RPA3-207ENST00000483031 TRIM6-TRIM34B2RNG4 842 aa10.64□□□□□ -0.71
RPA3-207ENST00000483031 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
RPA3-207ENST00000483031 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
RPA3-207ENST00000483031 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
RPA3-207ENST00000483031 DDX12PQ92771 950 aa10.62□□□□□ -0.71
RPA3-207ENST00000483031 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
RPA3-207ENST00000483031 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
RPA3-207ENST00000483031 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
RPA3-207ENST00000483031 KCNC4Q03721 635 aa10.58□□□□□ -0.72
RPA3-207ENST00000483031 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
RPA3-207ENST00000483031 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
RPA3-207ENST00000483031 NBR1Q14596 966 aa10.57□□□□□ -0.72
RPA3-207ENST00000483031 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
RPA3-207ENST00000483031 MAP3K7O43318 606 aa10.56□□□□□ -0.72
RPA3-207ENST00000483031 PDIA6Q15084 440 aa10.56□□□□□ -0.72
RPA3-207ENST00000483031 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
RPA3-207ENST00000483031 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
RPA3-207ENST00000483031 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
RPA3-207ENST00000483031 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
RPA3-207ENST00000483031 TSKSQ9UJT2 592 aa10.52□□□□□ -0.73
RPA3-207ENST00000483031 PPP4CP60510 307 aa10.49□□□□□ -0.73
RPA3-207ENST00000483031 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
RPA3-207ENST00000483031 CERKQ8TCT0 537 aa10.48□□□□□ -0.73
RPA3-207ENST00000483031 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
RPA3-207ENST00000483031 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
RPA3-207ENST00000483031 PRSS12P56730 875 aa10.46□□□□□ -0.73
RPA3-207ENST00000483031 E2F4Q16254 413 aa10.46□□□□□ -0.73
RPA3-207ENST00000483031 Q6ZNB5 142 aa10.46□□□□□ -0.73
RPA3-207ENST00000483031 NBPF26B4DH59 902 aa10.44□□□□□ -0.74
RPA3-207ENST00000483031 SMAPO00193 183 aa10.44□□□□□ -0.74
RPA3-207ENST00000483031 SAMD7Q7Z3H4 446 aa10.44□□□□□ -0.74
RPA3-207ENST00000483031 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
RPA3-207ENST00000483031 WDR70Q9NW82 654 aa10.43□□□□□ -0.74
RPA3-207ENST00000483031 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
RPA3-207ENST00000483031 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
RPA3-207ENST00000483031 TATDN2Q93075 761 aa10.41□□□□□ -0.74
RPA3-207ENST00000483031 FAM198AQ9UFP1 575 aa10.41□□□□□ -0.74
RPA3-207ENST00000483031 PRIM1P49642 420 aaKnown RBP10.4□□□□□ -0.74
RPA3-207ENST00000483031 LAPTM4AQ15012 233 aa10.4□□□□□ -0.74
RPA3-207ENST00000483031 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
RPA3-207ENST00000483031 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
RPA3-207ENST00000483031 IL21Q9HBE4 155 aa10.38□□□□□ -0.75
RPA3-207ENST00000483031 MTRQ99707 1265 aa10.37□□□□□ -0.75
RPA3-207ENST00000483031 RBM27Q9P2N5 1060 aaKnown RBP10.37□□□□□ -0.75
RPA3-207ENST00000483031 C3orf80F5H4A9 247 aa10.36□□□□□ -0.75
RPA3-207ENST00000483031 RNF40O75150 1001 aa10.36□□□□□ -0.75
RPA3-207ENST00000483031 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
RPA3-207ENST00000483031 OSBPP22059 807 aa10.35□□□□□ -0.75
RPA3-207ENST00000483031 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
RPA3-207ENST00000483031 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
RPA3-207ENST00000483031 GFRA3O60609 400 aa10.34□□□□□ -0.75
RPA3-207ENST00000483031 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
RPA3-207ENST00000483031 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
RPA3-207ENST00000483031 PRKD2Q9BZL6 878 aa10.33□□□□□ -0.76
RPA3-207ENST00000483031 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
RPA3-207ENST00000483031 APLP1P51693 650 aa10.3□□□□□ -0.76
RPA3-207ENST00000483031 ZNF516Q92618 1163 aa10.29□□□□□ -0.76
RPA3-207ENST00000483031 V9GY48 417 aaPredicted RBP10.29□□□□□ -0.76
RPA3-207ENST00000483031 PADI6Q6TGC4 694 aa10.28□□□□□ -0.76
RPA3-207ENST00000483031 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
RPA3-207ENST00000483031 TTC13Q8NBP0 860 aa10.28□□□□□ -0.76
RPA3-207ENST00000483031 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.28□□□□□ -0.76
RPA3-207ENST00000483031 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
RPA3-207ENST00000483031 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
RPA3-207ENST00000483031 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
RPA3-207ENST00000483031 TRAF7Q6Q0C0 670 aa10.27□□□□□ -0.77
RPA3-207ENST00000483031 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
RPA3-207ENST00000483031 GGCXP38435 758 aa10.25□□□□□ -0.77
RPA3-207ENST00000483031 NPDC1Q9NQX5 325 aaPredicted RBP10.25□□□□□ -0.77
RPA3-207ENST00000483031 COPS2P61201 443 aa10.23□□□□□ -0.77
RPA3-207ENST00000483031 LCE2BO14633 110 aa10.22□□□□□ -0.77
RPA3-207ENST00000483031 NKX2-3Q8TAU0 364 aa10.22□□□□□ -0.77
RPA3-207ENST00000483031 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
RPA3-207ENST00000483031 EYA1Q99502 592 aa10.2□□□□□ -0.78
RPA3-207ENST00000483031 TMUB1Q9BVT8 246 aa10.19□□□□□ -0.78
RPA3-207ENST00000483031 ZPR1O75312 459 aa10.18□□□□□ -0.78
RPA3-207ENST00000483031 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
RPA3-207ENST00000483031 PDZRN3Q9UPQ7 1066 aa10.18□□□□□ -0.78
RPA3-207ENST00000483031 PCDHB3Q9Y5E6 796 aa10.17□□□□□ -0.78
RPA3-207ENST00000483031 ARHGEF1Q92888 912 aaKnown RBP10.16□□□□□ -0.78
RPA3-207ENST00000483031 DNAJB2P25686 324 aa10.14□□□□□ -0.79
RPA3-207ENST00000483031 MLLT3P42568 568 aaPredicted RBP10.14□□□□□ -0.79
RPA3-207ENST00000483031 RBM46Q8TBY0 533 aaKnown RBP10.13□□□□□ -0.79
RPA3-207ENST00000483031 BLOC1S3Q6QNY0 202 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms