RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 ARHGAP5Q13017 1502 aa16.25■□□□□ 0.19
RAPGEF3-210ENST00000482843 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
RAPGEF3-210ENST00000482843 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
RAPGEF3-210ENST00000482843 RSPH4AQ5TD94 716 aa16.24■□□□□ 0.19
RAPGEF3-210ENST00000482843 CCDC144AA2RUR9 1427 aa16.22■□□□□ 0.19
RAPGEF3-210ENST00000482843 HOMEZQ8IX15 550 aa16.21■□□□□ 0.19
RAPGEF3-210ENST00000482843 TEX14Q8IWB6 1497 aa16.21■□□□□ 0.19
RAPGEF3-210ENST00000482843 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
RAPGEF3-210ENST00000482843 SPAG9O60271 1321 aaKnown RBP16.2■□□□□ 0.18
RAPGEF3-210ENST00000482843 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
RAPGEF3-210ENST00000482843 KIF3BO15066 747 aa16.18■□□□□ 0.18
RAPGEF3-210ENST00000482843 ITSN2Q9NZM3 1697 aa16.17■□□□□ 0.18
RAPGEF3-210ENST00000482843 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
RAPGEF3-210ENST00000482843 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
RAPGEF3-210ENST00000482843 ABCA8O94911 1581 aa16.15■□□□□ 0.18
RAPGEF3-210ENST00000482843 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
RAPGEF3-210ENST00000482843 C14orf37Q86TY3 774 aa16.13■□□□□ 0.17
RAPGEF3-210ENST00000482843 SYCP2Q9BX26 1530 aa16.13■□□□□ 0.17
RAPGEF3-210ENST00000482843 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
RAPGEF3-210ENST00000482843 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
RAPGEF3-210ENST00000482843 GGT6Q6P531 493 aa16.1■□□□□ 0.17
RAPGEF3-210ENST00000482843 RBM19Q9Y4C8 960 aaKnown RBP16.1■□□□□ 0.17
RAPGEF3-210ENST00000482843 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
RAPGEF3-210ENST00000482843 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
RAPGEF3-210ENST00000482843 SPATA31E1Q6ZUB1 1445 aa16.1■□□□□ 0.17
RAPGEF3-210ENST00000482843 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
RAPGEF3-210ENST00000482843 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
RAPGEF3-210ENST00000482843 PANK3Q9H999 370 aa16.09■□□□□ 0.17
RAPGEF3-210ENST00000482843 TMF1P82094 1093 aa16.08■□□□□ 0.17
RAPGEF3-210ENST00000482843 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
RAPGEF3-210ENST00000482843 CDC42BPAQ5VT25 1732 aa16.06■□□□□ 0.16
RAPGEF3-210ENST00000482843 FGD1P98174 961 aa16.06■□□□□ 0.16
RAPGEF3-210ENST00000482843 NUTM2DQ5VT03 806 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF3-210ENST00000482843 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
RAPGEF3-210ENST00000482843 FAM135AQ9P2D6 1515 aa16.04■□□□□ 0.16
RAPGEF3-210ENST00000482843 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
RAPGEF3-210ENST00000482843 PNISRQ8TF01 805 aaKnown RBP16.04■□□□□ 0.16
RAPGEF3-210ENST00000482843 CHD1O14646 1710 aa16.04■□□□□ 0.16
RAPGEF3-210ENST00000482843 KTN1Q86UP2 1357 aaKnown RBP16.03■□□□□ 0.16
RAPGEF3-210ENST00000482843 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
RAPGEF3-210ENST00000482843 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
RAPGEF3-210ENST00000482843 RALBP1Q15311 655 aa16.03■□□□□ 0.16
RAPGEF3-210ENST00000482843 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
RAPGEF3-210ENST00000482843 SAMD9LQ8IVG5 1584 aa16.02■□□□□ 0.16
RAPGEF3-210ENST00000482843 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.15
RAPGEF3-210ENST00000482843 DEKP35659 375 aaKnown RBP16.02■□□□□ 0.15
RAPGEF3-210ENST00000482843 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.15
RAPGEF3-210ENST00000482843 NUDCQ9Y266 331 aa16.01■□□□□ 0.15
RAPGEF3-210ENST00000482843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.01■□□□□ 0.15
RAPGEF3-210ENST00000482843 TTC37Q6PGP7 1564 aa16■□□□□ 0.15
RAPGEF3-210ENST00000482843 NLRP13Q86W25 1043 aa16■□□□□ 0.15
RAPGEF3-210ENST00000482843 PAXIP1Q6ZW49 1069 aaPredicted RBP16■□□□□ 0.15
RAPGEF3-210ENST00000482843 KANK1Q14678 1352 aa16■□□□□ 0.15
RAPGEF3-210ENST00000482843 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
RAPGEF3-210ENST00000482843 ADCY10Q96PN6 1610 aa15.99■□□□□ 0.15
RAPGEF3-210ENST00000482843 PLCH2O75038 1416 aa15.99■□□□□ 0.15
RAPGEF3-210ENST00000482843 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
RAPGEF3-210ENST00000482843 ABCC2Q92887 1545 aa15.98■□□□□ 0.15
RAPGEF3-210ENST00000482843 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
RAPGEF3-210ENST00000482843 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
RAPGEF3-210ENST00000482843 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAPGEF3-210ENST00000482843 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
RAPGEF3-210ENST00000482843 CFAP70Q5T0N1 1121 aa15.97■□□□□ 0.15
RAPGEF3-210ENST00000482843 DISP3Q9P2K9 1392 aa15.96■□□□□ 0.15
RAPGEF3-210ENST00000482843 SAFB2Q14151 953 aaKnown RBP eCLIP15.96■□□□□ 0.15
RAPGEF3-210ENST00000482843 ARHGEF12Q9NZN5 1544 aa15.96■□□□□ 0.14
RAPGEF3-210ENST00000482843 CDCA7LQ96GN5 454 aa15.95■□□□□ 0.14
RAPGEF3-210ENST00000482843 PRAG1Q86YV5 1406 aa15.95■□□□□ 0.14
RAPGEF3-210ENST00000482843 TRAK1Q9UPV9 953 aa15.93■□□□□ 0.14
RAPGEF3-210ENST00000482843 UHRF1BP1Q6BDS2 1440 aa15.93■□□□□ 0.14
RAPGEF3-210ENST00000482843 TESK2Q96S53 571 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 TAOK2Q9UL54 1235 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 PLA2R1Q13018 1463 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 BCORL1Q5H9F3 1711 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 RAPGEF3O95398 923 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 TPRNQ4KMQ1 711 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 CDC42BPBQ9Y5S2 1711 aa15.92■□□□□ 0.14
RAPGEF3-210ENST00000482843 PLIN1O60240 522 aa15.91■□□□□ 0.14
RAPGEF3-210ENST00000482843 A2MP01023 1474 aa15.91■□□□□ 0.14
RAPGEF3-210ENST00000482843 ARHGEF5Q12774 1597 aa15.91■□□□□ 0.14
RAPGEF3-210ENST00000482843 WASHC2CQ9Y4E1 1318 aa15.91■□□□□ 0.14
RAPGEF3-210ENST00000482843 CYB5RLQ6IPT4 315 aa15.9■□□□□ 0.14
RAPGEF3-210ENST00000482843 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
RAPGEF3-210ENST00000482843 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
RAPGEF3-210ENST00000482843 PREX2Q70Z35 1606 aa15.9■□□□□ 0.14
RAPGEF3-210ENST00000482843 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
RAPGEF3-210ENST00000482843 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
RAPGEF3-210ENST00000482843 FANCAO15360 1455 aa15.9■□□□□ 0.14
RAPGEF3-210ENST00000482843 ERBINQ96RT1 1412 aa15.89■□□□□ 0.13
RAPGEF3-210ENST00000482843 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
RAPGEF3-210ENST00000482843 BRD4O60885 1362 aaPredicted RBP15.88■□□□□ 0.13
RAPGEF3-210ENST00000482843 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
RAPGEF3-210ENST00000482843 KDM5CP41229 1560 aa15.88■□□□□ 0.13
RAPGEF3-210ENST00000482843 STK26Q9P289 416 aa15.87■□□□□ 0.13
RAPGEF3-210ENST00000482843 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
RAPGEF3-210ENST00000482843 DUOX2Q9NRD8 1548 aa15.87■□□□□ 0.13
RAPGEF3-210ENST00000482843 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
RAPGEF3-210ENST00000482843 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
RAPGEF3-210ENST00000482843 ADGRL1O94910 1474 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms