RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 DUOX2Q9NRD8 1548 aa12.25□□□□□ -0.45
TVP23B-203ENST00000482741 ERBINQ96RT1 1412 aa12.25□□□□□ -0.45
TVP23B-203ENST00000482741 ZNF518AQ6AHZ1 1483 aa12.25□□□□□ -0.45
TVP23B-203ENST00000482741 JPH4Q96JJ6 628 aa12.24□□□□□ -0.45
TVP23B-203ENST00000482741 MADDQ8WXG6 1647 aa12.24□□□□□ -0.45
TVP23B-203ENST00000482741 FGD6Q6ZV73 1430 aa12.24□□□□□ -0.45
TVP23B-203ENST00000482741 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
TVP23B-203ENST00000482741 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
TVP23B-203ENST00000482741 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.45
TVP23B-203ENST00000482741 ASXL2Q76L83 1435 aa12.21□□□□□ -0.45
TVP23B-203ENST00000482741 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.46
TVP23B-203ENST00000482741 FER1L4A9Z1Z3 1794 aa12.2□□□□□ -0.46
TVP23B-203ENST00000482741 RIMS1Q86UR5 1692 aaKnown RBP12.2□□□□□ -0.46
TVP23B-203ENST00000482741 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
TVP23B-203ENST00000482741 KDM6BO15054 1643 aa12.2□□□□□ -0.46
TVP23B-203ENST00000482741 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
TVP23B-203ENST00000482741 SPHKAPQ2M3C7 1700 aa12.2□□□□□ -0.46
TVP23B-203ENST00000482741 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
TVP23B-203ENST00000482741 CAMSAP1Q5T5Y3 1602 aa12.19□□□□□ -0.46
TVP23B-203ENST00000482741 ATP7AQ04656 1500 aa12.19□□□□□ -0.46
TVP23B-203ENST00000482741 CCDC141Q6ZP82 1450 aa12.18□□□□□ -0.46
TVP23B-203ENST00000482741 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
TVP23B-203ENST00000482741 RGL2O15211 777 aa12.17□□□□□ -0.46
TVP23B-203ENST00000482741 UGGT1Q9NYU2 1555 aa12.17□□□□□ -0.46
TVP23B-203ENST00000482741 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
TVP23B-203ENST00000482741 RPRD2Q5VT52 1461 aaKnown RBP12.17□□□□□ -0.46
TVP23B-203ENST00000482741 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
TVP23B-203ENST00000482741 KNDC1Q76NI1 1749 aa12.15□□□□□ -0.46
TVP23B-203ENST00000482741 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
TVP23B-203ENST00000482741 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
TVP23B-203ENST00000482741 ARHGAP31Q2M1Z3 1444 aa12.15□□□□□ -0.47
TVP23B-203ENST00000482741 MYO3AQ8NEV4 1616 aa12.14□□□□□ -0.47
TVP23B-203ENST00000482741 EFCAB6Q5THR3 1501 aa12.13□□□□□ -0.47
TVP23B-203ENST00000482741 DAPK1P53355 1430 aa12.13□□□□□ -0.47
TVP23B-203ENST00000482741 SPATA31D1Q6ZQQ2 1576 aa12.12□□□□□ -0.47
TVP23B-203ENST00000482741 LOC105371045A0A1W2PR82 267 aa12.12□□□□□ -0.47
TVP23B-203ENST00000482741 E9PCH4 1651 aa12.12□□□□□ -0.47
TVP23B-203ENST00000482741 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
TVP23B-203ENST00000482741 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
TVP23B-203ENST00000482741 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
TVP23B-203ENST00000482741 PREX1Q8TCU6 1659 aa12.1□□□□□ -0.47
TVP23B-203ENST00000482741 TRPM2O94759 1503 aa12.09□□□□□ -0.47
TVP23B-203ENST00000482741 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.47
TVP23B-203ENST00000482741 PPLO60437 1756 aa12.08□□□□□ -0.48
TVP23B-203ENST00000482741 ABCC5O15440 1437 aa12.08□□□□□ -0.48
TVP23B-203ENST00000482741 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
TVP23B-203ENST00000482741 DENND4BO75064 1496 aaPredicted RBP12.07□□□□□ -0.48
TVP23B-203ENST00000482741 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
TVP23B-203ENST00000482741 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
TVP23B-203ENST00000482741 TMEM131LA2VDJ0 1609 aa12.04□□□□□ -0.48
TVP23B-203ENST00000482741 PTPRTO14522 1441 aa12.04□□□□□ -0.48
TVP23B-203ENST00000482741 CLSPNQ9HAW4 1339 aa12.03□□□□□ -0.48
TVP23B-203ENST00000482741 FANCAO15360 1455 aa12.03□□□□□ -0.48
TVP23B-203ENST00000482741 ARID3CA6NKF2 412 aa12.02□□□□□ -0.48
TVP23B-203ENST00000482741 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.48
TVP23B-203ENST00000482741 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
TVP23B-203ENST00000482741 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
TVP23B-203ENST00000482741 DIP2AQ14689 1571 aa12□□□□□ -0.49
TVP23B-203ENST00000482741 SETBP1Q9Y6X0 1596 aa12□□□□□ -0.49
TVP23B-203ENST00000482741 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
TVP23B-203ENST00000482741 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
TVP23B-203ENST00000482741 C3P01024 1663 aa12□□□□□ -0.49
TVP23B-203ENST00000482741 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
TVP23B-203ENST00000482741 ADGRB3O60242 1522 aa11.99□□□□□ -0.49
TVP23B-203ENST00000482741 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
TVP23B-203ENST00000482741 NAIPQ13075 1403 aa11.99□□□□□ -0.49
TVP23B-203ENST00000482741 CCNB3Q8WWL7 1395 aa11.99□□□□□ -0.49
TVP23B-203ENST00000482741 ABCC3O15438 1527 aa11.98□□□□□ -0.49
TVP23B-203ENST00000482741 KIF1BO60333 1816 aa11.98□□□□□ -0.49
TVP23B-203ENST00000482741 CLTCQ00610 1675 aaKnown RBP11.98□□□□□ -0.49
TVP23B-203ENST00000482741 IQGAP1P46940 1657 aa11.97□□□□□ -0.49
TVP23B-203ENST00000482741 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
TVP23B-203ENST00000482741 C9orf84Q5VXU9 1444 aa11.97□□□□□ -0.49
TVP23B-203ENST00000482741 UBR1Q8IWV7 1749 aa11.96□□□□□ -0.49
TVP23B-203ENST00000482741 PZPP20742 1482 aa11.96□□□□□ -0.49
TVP23B-203ENST00000482741 PTPRKQ15262 1439 aa11.96□□□□□ -0.49
TVP23B-203ENST00000482741 SYNMO15061 1565 aa11.94□□□□□ -0.5
TVP23B-203ENST00000482741 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
TVP23B-203ENST00000482741 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
TVP23B-203ENST00000482741 MYOM2P54296 1465 aa11.93□□□□□ -0.5
TVP23B-203ENST00000482741 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
TVP23B-203ENST00000482741 TRPM1Q7Z4N2 1603 aa11.92□□□□□ -0.5
TVP23B-203ENST00000482741 NPATQ14207 1427 aa11.92□□□□□ -0.5
TVP23B-203ENST00000482741 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
TVP23B-203ENST00000482741 ZFYVE9O95405 1425 aa11.9□□□□□ -0.51
TVP23B-203ENST00000482741 NOS1P29475 1434 aa11.9□□□□□ -0.51
TVP23B-203ENST00000482741 SLIT1O75093 1534 aa11.89□□□□□ -0.51
TVP23B-203ENST00000482741 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
TVP23B-203ENST00000482741 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
TVP23B-203ENST00000482741 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
TVP23B-203ENST00000482741 ADGRB2O60241 1585 aa11.88□□□□□ -0.51
TVP23B-203ENST00000482741 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
TVP23B-203ENST00000482741 NRXN3Q9Y4C0 1643 aa11.88□□□□□ -0.51
TVP23B-203ENST00000482741 CLTCL1P53675 1640 aa11.88□□□□□ -0.51
TVP23B-203ENST00000482741 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
TVP23B-203ENST00000482741 C1orf115Q9H7X2 142 aa11.86□□□□□ -0.51
TVP23B-203ENST00000482741 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
TVP23B-203ENST00000482741 A2MP01023 1474 aa11.86□□□□□ -0.51
TVP23B-203ENST00000482741 USP32Q8NFA0 1604 aa11.85□□□□□ -0.51
TVP23B-203ENST00000482741 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms