RNA–Protein interactions for RNA: ENST00000482657.1

LCNL1-204, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 3,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-204ENST00000482657 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
LCNL1-204ENST00000482657 C9orf84Q5VXU9 1444 aa20.17■□□□□ 0.82
LCNL1-204ENST00000482657 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
LCNL1-204ENST00000482657 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
LCNL1-204ENST00000482657 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
LCNL1-204ENST00000482657 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
LCNL1-204ENST00000482657 CCDC146Q8IYE0 955 aa20.15■□□□□ 0.82
LCNL1-204ENST00000482657 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
LCNL1-204ENST00000482657 WDR62O43379 1518 aa20.14■□□□□ 0.82
LCNL1-204ENST00000482657 DENND4BO75064 1496 aaPredicted RBP20.13■□□□□ 0.81
LCNL1-204ENST00000482657 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
LCNL1-204ENST00000482657 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
LCNL1-204ENST00000482657 CRBNQ96SW2 442 aa20.1■□□□□ 0.81
LCNL1-204ENST00000482657 LRRIQ1Q96JM4 1722 aa20.08■□□□□ 0.81
LCNL1-204ENST00000482657 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
LCNL1-204ENST00000482657 DISP1Q96F81 1524 aa20.07■□□□□ 0.8
LCNL1-204ENST00000482657 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
LCNL1-204ENST00000482657 TEX14Q8IWB6 1497 aa20.06■□□□□ 0.8
LCNL1-204ENST00000482657 KIF3BO15066 747 aa20.06■□□□□ 0.8
LCNL1-204ENST00000482657 PZPP20742 1482 aa20.06■□□□□ 0.8
LCNL1-204ENST00000482657 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
LCNL1-204ENST00000482657 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
LCNL1-204ENST00000482657 KDM5BQ9UGL1 1544 aa20.03■□□□□ 0.8
LCNL1-204ENST00000482657 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
LCNL1-204ENST00000482657 DHX29Q7Z478 1369 aaKnown RBP20.03■□□□□ 0.8
LCNL1-204ENST00000482657 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
LCNL1-204ENST00000482657 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
LCNL1-204ENST00000482657 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
LCNL1-204ENST00000482657 RSPH4AQ5TD94 716 aa20.02■□□□□ 0.79
LCNL1-204ENST00000482657 NUTM2DQ5VT03 806 aaPredicted RBP20.02■□□□□ 0.79
LCNL1-204ENST00000482657 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.79
LCNL1-204ENST00000482657 ARID4BQ4LE39 1312 aaPredicted RBP20.01■□□□□ 0.79
LCNL1-204ENST00000482657 KIAA0556O60303 1618 aa20.01■□□□□ 0.79
LCNL1-204ENST00000482657 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
LCNL1-204ENST00000482657 SPAG9O60271 1321 aaKnown RBP20.01■□□□□ 0.79
LCNL1-204ENST00000482657 PBRM1Q86U86 1689 aa20■□□□□ 0.79
LCNL1-204ENST00000482657 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
LCNL1-204ENST00000482657 BACH2Q9BYV9 841 aa20■□□□□ 0.79
LCNL1-204ENST00000482657 SPATA31E1Q6ZUB1 1445 aa19.99■□□□□ 0.79
LCNL1-204ENST00000482657 CDCA8Q53HL2 280 aa19.98■□□□□ 0.79
LCNL1-204ENST00000482657 GGT6Q6P531 493 aa19.98■□□□□ 0.79
LCNL1-204ENST00000482657 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
LCNL1-204ENST00000482657 BRPF3Q9ULD4 1205 aa19.97■□□□□ 0.79
LCNL1-204ENST00000482657 PDE3BQ13370 1112 aa19.97■□□□□ 0.79
LCNL1-204ENST00000482657 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
LCNL1-204ENST00000482657 DNMT1P26358 1616 aaKnown RBP19.96■□□□□ 0.79
LCNL1-204ENST00000482657 ATP10BO94823 1461 aa19.96■□□□□ 0.79
LCNL1-204ENST00000482657 ARHGAP5Q13017 1502 aa19.95■□□□□ 0.78
LCNL1-204ENST00000482657 KIF14Q15058 1648 aa19.95■□□□□ 0.78
LCNL1-204ENST00000482657 APAF1O14727 1248 aa19.95■□□□□ 0.78
LCNL1-204ENST00000482657 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
LCNL1-204ENST00000482657 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
LCNL1-204ENST00000482657 MS4A1P11836 297 aa19.92■□□□□ 0.78
LCNL1-204ENST00000482657 C20orf194Q5TEA3 1177 aa19.92■□□□□ 0.78
LCNL1-204ENST00000482657 USP35Q9P2H5 1018 aa19.92■□□□□ 0.78
LCNL1-204ENST00000482657 NPM1P06748 294 aaKnown RBP eCLIP19.92■□□□□ 0.78
LCNL1-204ENST00000482657 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
LCNL1-204ENST00000482657 GSE1Q14687 1217 aa19.92■□□□□ 0.78
LCNL1-204ENST00000482657 NFKBIBQ15653 356 aa19.91■□□□□ 0.78
LCNL1-204ENST00000482657 SLKQ9H2G2 1235 aaPredicted RBP19.9■□□□□ 0.78
LCNL1-204ENST00000482657 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
LCNL1-204ENST00000482657 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
LCNL1-204ENST00000482657 BCL2L13Q9BXK5 485 aa19.88■□□□□ 0.77
LCNL1-204ENST00000482657 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
LCNL1-204ENST00000482657 SPRYD3Q8NCJ5 442 aa19.87■□□□□ 0.77
LCNL1-204ENST00000482657 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
LCNL1-204ENST00000482657 PLEKHH2Q8IVE3 1493 aa19.87■□□□□ 0.77
LCNL1-204ENST00000482657 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
LCNL1-204ENST00000482657 CLUAP1Q96AJ1 413 aa19.86■□□□□ 0.77
LCNL1-204ENST00000482657 STK26Q9P289 416 aa19.86■□□□□ 0.77
LCNL1-204ENST00000482657 PRKCSHP14314 528 aaPredicted RBP19.85■□□□□ 0.77
LCNL1-204ENST00000482657 CCDC141Q6ZP82 1450 aa19.84■□□□□ 0.77
LCNL1-204ENST00000482657 UPF2Q9HAU5 1272 aaKnown RBP19.84■□□□□ 0.77
LCNL1-204ENST00000482657 KANK1Q14678 1352 aa19.83■□□□□ 0.77
LCNL1-204ENST00000482657 RNF123Q5XPI4 1314 aa19.83■□□□□ 0.77
LCNL1-204ENST00000482657 ERBINQ96RT1 1412 aa19.83■□□□□ 0.76
LCNL1-204ENST00000482657 FAM161AQ3B820 660 aa19.83■□□□□ 0.76
LCNL1-204ENST00000482657 RALGAPBQ86X10 1494 aa19.83■□□□□ 0.76
LCNL1-204ENST00000482657 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
LCNL1-204ENST00000482657 FRAT2O75474 233 aaPredicted RBP19.81■□□□□ 0.76
LCNL1-204ENST00000482657 TMEM132EQ6IEE7 984 aa19.81■□□□□ 0.76
LCNL1-204ENST00000482657 CENPQQ7L2Z9 268 aaPredicted RBP19.81■□□□□ 0.76
LCNL1-204ENST00000482657 TESK2Q96S53 571 aa19.81■□□□□ 0.76
LCNL1-204ENST00000482657 STAG3Q9UJ98 1225 aa19.81■□□□□ 0.76
LCNL1-204ENST00000482657 PER1O15534 1290 aaPredicted RBP19.8■□□□□ 0.76
LCNL1-204ENST00000482657 BCAR3O75815 825 aa19.79■□□□□ 0.76
LCNL1-204ENST00000482657 COG6Q9Y2V7 657 aa19.79■□□□□ 0.76
LCNL1-204ENST00000482657 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
LCNL1-204ENST00000482657 BECN1Q14457 450 aa19.78■□□□□ 0.76
LCNL1-204ENST00000482657 ITSN2Q9NZM3 1697 aa19.77■□□□□ 0.75
LCNL1-204ENST00000482657 BCORL1Q5H9F3 1711 aa19.76■□□□□ 0.75
LCNL1-204ENST00000482657 U2AF1L5P0DN76 240 aaPredicted RBP19.76■□□□□ 0.75
LCNL1-204ENST00000482657 U2AF1Q01081 240 aaKnown RBP eCLIP19.76■□□□□ 0.75
LCNL1-204ENST00000482657 PRAG1Q86YV5 1406 aa19.75■□□□□ 0.75
LCNL1-204ENST00000482657 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
LCNL1-204ENST00000482657 SYCP2Q9BX26 1530 aa19.74■□□□□ 0.75
LCNL1-204ENST00000482657 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
LCNL1-204ENST00000482657 PANK1Q8TE04 598 aa19.74■□□□□ 0.75
LCNL1-204ENST00000482657 CFAP53Q96M91 514 aa19.74■□□□□ 0.75
LCNL1-204ENST00000482657 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms