RNA–Protein interactions for RNA: ENST00000482499.1

CMC1-210, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 446 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-210ENST00000482499 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
CMC1-210ENST00000482499 RABGEF1Q9UJ41 708 aa11.87□□□□□ -0.51
CMC1-210ENST00000482499 C6orf132Q5T0Z8 1188 aa11.84□□□□□ -0.51
CMC1-210ENST00000482499 EPAS1Q99814 870 aa11.83□□□□□ -0.52
CMC1-210ENST00000482499 DDX12PQ92771 950 aa11.82□□□□□ -0.52
CMC1-210ENST00000482499 KIAA1468Q9P260 1216 aa11.82□□□□□ -0.52
CMC1-210ENST00000482499 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
CMC1-210ENST00000482499 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
CMC1-210ENST00000482499 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
CMC1-210ENST00000482499 BCAMP50895 628 aa11.79□□□□□ -0.52
CMC1-210ENST00000482499 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
CMC1-210ENST00000482499 LAPTM4BQ86VI4 370 aa11.76□□□□□ -0.53
CMC1-210ENST00000482499 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
CMC1-210ENST00000482499 ZFRQ96KR1 1074 aaKnown RBP11.76□□□□□ -0.53
CMC1-210ENST00000482499 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
CMC1-210ENST00000482499 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
CMC1-210ENST00000482499 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
CMC1-210ENST00000482499 A0A0G2JS52 829 aa11.73□□□□□ -0.53
CMC1-210ENST00000482499 NBR1Q14596 966 aa11.73□□□□□ -0.53
CMC1-210ENST00000482499 PDIA6Q15084 440 aa11.72□□□□□ -0.53
CMC1-210ENST00000482499 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
CMC1-210ENST00000482499 MAP3K7O43318 606 aa11.7□□□□□ -0.54
CMC1-210ENST00000482499 EN1Q05925 392 aaPredicted RBP11.7□□□□□ -0.54
CMC1-210ENST00000482499 WBP1LQ9NX94 342 aa11.7□□□□□ -0.54
CMC1-210ENST00000482499 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
CMC1-210ENST00000482499 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
CMC1-210ENST00000482499 TSKSQ9UJT2 592 aa11.68□□□□□ -0.54
CMC1-210ENST00000482499 RGS20O76081 388 aa11.67□□□□□ -0.54
CMC1-210ENST00000482499 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
CMC1-210ENST00000482499 E2F4Q16254 413 aa11.67□□□□□ -0.54
CMC1-210ENST00000482499 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
CMC1-210ENST00000482499 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
CMC1-210ENST00000482499 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
CMC1-210ENST00000482499 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
CMC1-210ENST00000482499 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
CMC1-210ENST00000482499 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
CMC1-210ENST00000482499 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
CMC1-210ENST00000482499 GRXCR2A6NFK2 248 aa11.62□□□□□ -0.55
CMC1-210ENST00000482499 NYAP1Q6ZVC0 841 aa11.62□□□□□ -0.55
CMC1-210ENST00000482499 PACS2Q86VP3 889 aa11.62□□□□□ -0.55
CMC1-210ENST00000482499 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
CMC1-210ENST00000482499 HPS5Q9UPZ3 1129 aa11.62□□□□□ -0.55
CMC1-210ENST00000482499 SMAPO00193 183 aa11.61□□□□□ -0.55
CMC1-210ENST00000482499 FAM198AQ9UFP1 575 aa11.61□□□□□ -0.55
CMC1-210ENST00000482499 CDCA7LQ96GN5 454 aa11.6□□□□□ -0.55
CMC1-210ENST00000482499 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
CMC1-210ENST00000482499 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
CMC1-210ENST00000482499 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
CMC1-210ENST00000482499 C3orf80F5H4A9 247 aa11.59□□□□□ -0.55
CMC1-210ENST00000482499 IRX2Q9BZI1 471 aaPredicted RBP11.59□□□□□ -0.55
CMC1-210ENST00000482499 PRSS12P56730 875 aa11.58□□□□□ -0.56
CMC1-210ENST00000482499 KCNC4Q03721 635 aa11.57□□□□□ -0.56
CMC1-210ENST00000482499 OSBPP22059 807 aa11.55□□□□□ -0.56
CMC1-210ENST00000482499 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
CMC1-210ENST00000482499 SAMD7Q7Z3H4 446 aa11.54□□□□□ -0.56
CMC1-210ENST00000482499 CERKQ8TCT0 537 aa11.53□□□□□ -0.56
CMC1-210ENST00000482499 PPP4CP60510 307 aa11.52□□□□□ -0.57
CMC1-210ENST00000482499 TATDN2Q93075 761 aa11.52□□□□□ -0.57
CMC1-210ENST00000482499 PNMA3Q9UL41 463 aa11.51□□□□□ -0.57
CMC1-210ENST00000482499 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
CMC1-210ENST00000482499 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
CMC1-210ENST00000482499 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.57
CMC1-210ENST00000482499 NPDC1Q9NQX5 325 aaPredicted RBP11.46□□□□□ -0.57
CMC1-210ENST00000482499 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
CMC1-210ENST00000482499 RNF40O75150 1001 aa11.42□□□□□ -0.58
CMC1-210ENST00000482499 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
CMC1-210ENST00000482499 MTRQ99707 1265 aa11.42□□□□□ -0.58
CMC1-210ENST00000482499 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
CMC1-210ENST00000482499 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
CMC1-210ENST00000482499 APLP1P51693 650 aa11.39□□□□□ -0.59
CMC1-210ENST00000482499 ZNF516Q92618 1163 aa11.39□□□□□ -0.59
CMC1-210ENST00000482499 MLLT3P42568 568 aaPredicted RBP11.38□□□□□ -0.59
CMC1-210ENST00000482499 HDGFP51858 240 aaKnown RBP11.38□□□□□ -0.59
CMC1-210ENST00000482499 IL21Q9HBE4 155 aa11.38□□□□□ -0.59
CMC1-210ENST00000482499 SWT1Q5T5J6 900 aaKnown RBP11.37□□□□□ -0.59
CMC1-210ENST00000482499 Q6ZNB5 142 aa11.36□□□□□ -0.59
CMC1-210ENST00000482499 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
CMC1-210ENST00000482499 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
CMC1-210ENST00000482499 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
CMC1-210ENST00000482499 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
CMC1-210ENST00000482499 EYA1Q99502 592 aa11.33□□□□□ -0.6
CMC1-210ENST00000482499 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
CMC1-210ENST00000482499 COPS2P61201 443 aa11.3□□□□□ -0.6
CMC1-210ENST00000482499 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
CMC1-210ENST00000482499 GFRA3O60609 400 aa11.28□□□□□ -0.6
CMC1-210ENST00000482499 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
CMC1-210ENST00000482499 PTGDRQ13258 359 aa11.27□□□□□ -0.61
CMC1-210ENST00000482499 LCE2BO14633 110 aa11.26□□□□□ -0.61
CMC1-210ENST00000482499 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
CMC1-210ENST00000482499 LAPTM4AQ15012 233 aa11.25□□□□□ -0.61
CMC1-210ENST00000482499 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
CMC1-210ENST00000482499 V9GY48 417 aaPredicted RBP11.23□□□□□ -0.61
CMC1-210ENST00000482499 NUTM2FA1L443 756 aa11.21□□□□□ -0.61
CMC1-210ENST00000482499 ZPR1O75312 459 aa11.21□□□□□ -0.61
CMC1-210ENST00000482499 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
CMC1-210ENST00000482499 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
CMC1-210ENST00000482499 DNAJB2P25686 324 aa11.2□□□□□ -0.62
CMC1-210ENST00000482499 PCDHB3Q9Y5E6 796 aa11.2□□□□□ -0.62
CMC1-210ENST00000482499 TRAF7Q6Q0C0 670 aa11.19□□□□□ -0.62
CMC1-210ENST00000482499 BLOC1S3Q6QNY0 202 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms