RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 KDM5DQ9BY66 1539 aa22.49■■□□□ 1.19
RXRA-202ENST00000481739 RPRD2Q5VT52 1461 aaKnown RBP22.48■■□□□ 1.19
RXRA-202ENST00000481739 DHX29Q7Z478 1369 aaKnown RBP22.46■■□□□ 1.19
RXRA-202ENST00000481739 FOXD1Q16676 465 aa22.45■■□□□ 1.19
RXRA-202ENST00000481739 FRMPD1Q5SYB0 1578 aa22.45■■□□□ 1.18
RXRA-202ENST00000481739 UNC13BO14795 1591 aa22.44■■□□□ 1.18
RXRA-202ENST00000481739 A2MP01023 1474 aa22.43■■□□□ 1.18
RXRA-202ENST00000481739 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
RXRA-202ENST00000481739 KIF3BO15066 747 aa22.42■■□□□ 1.18
RXRA-202ENST00000481739 PKD2Q13563 968 aa22.42■■□□□ 1.18
RXRA-202ENST00000481739 MIER1Q8N108 512 aa22.41■■□□□ 1.18
RXRA-202ENST00000481739 FAM135AQ9P2D6 1515 aa22.39■■□□□ 1.18
RXRA-202ENST00000481739 EIF2AK4Q9P2K8 1649 aaKnown RBP22.39■■□□□ 1.17
RXRA-202ENST00000481739 ZMYM4Q5VZL5 1548 aa22.38■■□□□ 1.17
RXRA-202ENST00000481739 DIP2CQ9Y2E4 1556 aa22.38■■□□□ 1.17
RXRA-202ENST00000481739 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
RXRA-202ENST00000481739 CENPBP07199 599 aaPredicted RBP22.37■■□□□ 1.17
RXRA-202ENST00000481739 COL17A1Q9UMD9 1497 aaPredicted RBP22.36■■□□□ 1.17
RXRA-202ENST00000481739 IQGAP3Q86VI3 1631 aa22.36■■□□□ 1.17
RXRA-202ENST00000481739 MAGI2Q86UL8 1455 aa22.36■■□□□ 1.17
RXRA-202ENST00000481739 DEPDC5O75140 1603 aa22.34■■□□□ 1.17
RXRA-202ENST00000481739 KANK1Q14678 1352 aa22.34■■□□□ 1.17
RXRA-202ENST00000481739 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
RXRA-202ENST00000481739 GGT6Q6P531 493 aa22.29■■□□□ 1.16
RXRA-202ENST00000481739 ATP10AO60312 1499 aa22.28■■□□□ 1.16
RXRA-202ENST00000481739 PRDM15P57071 1507 aaPredicted RBP22.27■■□□□ 1.16
RXRA-202ENST00000481739 RNF17Q9BXT8 1623 aaKnown RBP22.27■■□□□ 1.16
RXRA-202ENST00000481739 MROH1Q8NDA8 1641 aa22.26■■□□□ 1.15
RXRA-202ENST00000481739 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
RXRA-202ENST00000481739 VWDEQ8N2E2 1590 aa22.23■■□□□ 1.15
RXRA-202ENST00000481739 TET3O43151 1660 aa22.22■■□□□ 1.15
RXRA-202ENST00000481739 ARHGEF40Q8TER5 1519 aa22.22■■□□□ 1.15
RXRA-202ENST00000481739 EIF4G2P78344 907 aaKnown RBP eCLIP22.21■■□□□ 1.151e-6■■■■■ 37.4
RXRA-202ENST00000481739 CEP152O94986 1710 aa22.2■■□□□ 1.15
RXRA-202ENST00000481739 E9PCH4 1651 aa22.2■■□□□ 1.14
RXRA-202ENST00000481739 WASHC2CQ9Y4E1 1318 aa22.19■■□□□ 1.14
RXRA-202ENST00000481739 REREQ9P2R6 1566 aa22.19■■□□□ 1.14
RXRA-202ENST00000481739 UHRF1BP1Q6BDS2 1440 aa22.16■■□□□ 1.14
RXRA-202ENST00000481739 DDX10Q13206 875 aaKnown RBP22.15■■□□□ 1.14
RXRA-202ENST00000481739 CCDC144AA2RUR9 1427 aa22.15■■□□□ 1.14
RXRA-202ENST00000481739 LMTK2Q8IWU2 1503 aa22.15■■□□□ 1.14
RXRA-202ENST00000481739 AGLP35573 1532 aa22.14■■□□□ 1.13
RXRA-202ENST00000481739 EFCAB6Q5THR3 1501 aa22.14■■□□□ 1.13
RXRA-202ENST00000481739 PLA2R1Q13018 1463 aa22.13■■□□□ 1.13
RXRA-202ENST00000481739 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
RXRA-202ENST00000481739 ABCC3O15438 1527 aa22.13■■□□□ 1.13
RXRA-202ENST00000481739 MLECQ14165 292 aa22.12■■□□□ 1.13
RXRA-202ENST00000481739 NBPF8Q3BBV2 869 aa22.12■■□□□ 1.13
RXRA-202ENST00000481739 SIGLEC1Q9BZZ2 1709 aa22.12■■□□□ 1.13
RXRA-202ENST00000481739 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
RXRA-202ENST00000481739 ARID4BQ4LE39 1312 aaPredicted RBP22.11■■□□□ 1.13
RXRA-202ENST00000481739 ZC3H13Q5T200 1668 aaKnown RBP22.09■■□□□ 1.13
RXRA-202ENST00000481739 CAMSAP1Q5T5Y3 1602 aa22.09■■□□□ 1.13
RXRA-202ENST00000481739 HIRIP3Q9BW71 556 aaPredicted RBP22.09■■□□□ 1.13
RXRA-202ENST00000481739 CFAP65Q6ZU64 1925 aaKnown RBP22.09■■□□□ 1.13
RXRA-202ENST00000481739 SPATA31E1Q6ZUB1 1445 aa22.08■■□□□ 1.12
RXRA-202ENST00000481739 TRPM2O94759 1503 aa22.07■■□□□ 1.12
RXRA-202ENST00000481739 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
RXRA-202ENST00000481739 PTPRTO14522 1441 aa22.07■■□□□ 1.12
RXRA-202ENST00000481739 NPATQ14207 1427 aa22.05■■□□□ 1.12
RXRA-202ENST00000481739 ANP32CO43423 234 aa22.04■■□□□ 1.12
RXRA-202ENST00000481739 YTHDC1Q96MU7 727 aaKnown RBP22.04■■□□□ 1.12
RXRA-202ENST00000481739 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
RXRA-202ENST00000481739 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
RXRA-202ENST00000481739 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
RXRA-202ENST00000481739 ESF1Q9H501 851 aaKnown RBP22.03■■□□□ 1.12
RXRA-202ENST00000481739 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
RXRA-202ENST00000481739 CLTCL1P53675 1640 aa22.01■■□□□ 1.11
RXRA-202ENST00000481739 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
RXRA-202ENST00000481739 DCAF11Q8TEB1 546 aa21.99■■□□□ 1.11
RXRA-202ENST00000481739 KDM2AQ9Y2K7 1162 aa21.99■■□□□ 1.11
RXRA-202ENST00000481739 POLR1AO95602 1720 aaPredicted RBP21.99■■□□□ 1.11
RXRA-202ENST00000481739 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
RXRA-202ENST00000481739 ARHGAP31Q2M1Z3 1444 aa21.98■■□□□ 1.11
RXRA-202ENST00000481739 CCDC7Q96M83 1385 aa21.98■■□□□ 1.11
RXRA-202ENST00000481739 UGGT1Q9NYU2 1555 aa21.97■■□□□ 1.11
RXRA-202ENST00000481739 USP47Q96K76 1375 aa21.97■■□□□ 1.11
RXRA-202ENST00000481739 CNTLNQ9NXG0 1405 aa21.96■■□□□ 1.11
RXRA-202ENST00000481739 KIF1BO60333 1816 aa21.94■■□□□ 1.1
RXRA-202ENST00000481739 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
RXRA-202ENST00000481739 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
RXRA-202ENST00000481739 NOS1P29475 1434 aa21.93■■□□□ 1.1
RXRA-202ENST00000481739 PRAG1Q86YV5 1406 aa21.93■■□□□ 1.1
RXRA-202ENST00000481739 PREX1Q8TCU6 1659 aa21.92■■□□□ 1.1
RXRA-202ENST00000481739 STAC3Q96MF2 364 aa21.92■■□□□ 1.1
RXRA-202ENST00000481739 FBXO31Q5XUX0 539 aaPredicted RBP21.91■■□□□ 1.1
RXRA-202ENST00000481739 SYNMO15061 1565 aa21.9■■□□□ 1.1
RXRA-202ENST00000481739 NEURL4Q96JN8 1562 aa21.89■■□□□ 1.1
RXRA-202ENST00000481739 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
RXRA-202ENST00000481739 LAMC1P11047 1609 aa21.88■■□□□ 1.09
RXRA-202ENST00000481739 GPRASP1Q5JY77 1395 aa21.88■■□□□ 1.09
RXRA-202ENST00000481739 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
RXRA-202ENST00000481739 KIF7Q2M1P5 1343 aa21.87■■□□□ 1.09
RXRA-202ENST00000481739 ERVK-7P63135 1459 aa21.87■■□□□ 1.09
RXRA-202ENST00000481739 TRPM1Q7Z4N2 1603 aa21.87■■□□□ 1.09
RXRA-202ENST00000481739 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
RXRA-202ENST00000481739 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
RXRA-202ENST00000481739 MROH2AA6NES4 1674 aa21.85■■□□□ 1.09
RXRA-202ENST00000481739 PIK3C2BO00750 1634 aa21.84■■□□□ 1.09
RXRA-202ENST00000481739 C11orf95C9JLR9 678 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms