RNA–Protein interactions for RNA: ENST00000481475.1

TNC-207, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-207ENST00000481475 KDM5CP41229 1560 aa11.33□□□□□ -0.6
TNC-207ENST00000481475 GOLGA3Q08378 1498 aa11.33□□□□□ -0.6
TNC-207ENST00000481475 ABCA6Q8N139 1617 aa11.33□□□□□ -0.6
TNC-207ENST00000481475 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
TNC-207ENST00000481475 XIRP1Q702N8 1843 aaKnown RBP11.32□□□□□ -0.6
TNC-207ENST00000481475 A2ML1A8K2U0 1454 aa11.32□□□□□ -0.6
TNC-207ENST00000481475 APLP2Q06481 763 aa11.32□□□□□ -0.6
TNC-207ENST00000481475 JCADQ9P266 1359 aa11.31□□□□□ -0.6
TNC-207ENST00000481475 NHSL1Q5SYE7 1610 aa11.3□□□□□ -0.6
TNC-207ENST00000481475 MED14O60244 1454 aa11.3□□□□□ -0.6
TNC-207ENST00000481475 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
TNC-207ENST00000481475 SLC34A2O95436 690 aa11.28□□□□□ -0.6
TNC-207ENST00000481475 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
TNC-207ENST00000481475 NPHP4O75161 1426 aaPredicted RBP11.27□□□□□ -0.6
TNC-207ENST00000481475 DEPDC5O75140 1603 aa11.26□□□□□ -0.61
TNC-207ENST00000481475 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
TNC-207ENST00000481475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.26□□□□□ -0.61
TNC-207ENST00000481475 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
TNC-207ENST00000481475 NUTM2BA6NNL0 878 aaPredicted RBP11.25□□□□□ -0.61
TNC-207ENST00000481475 NUTM2EB1AL46 878 aaPredicted RBP11.25□□□□□ -0.61
TNC-207ENST00000481475 NUTM2DQ5VT03 806 aaPredicted RBP11.25□□□□□ -0.61
TNC-207ENST00000481475 NUTM2AQ8IVF1 878 aaPredicted RBP11.25□□□□□ -0.61
TNC-207ENST00000481475 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
TNC-207ENST00000481475 MEX3CQ5U5Q3 659 aaKnown RBP11.24□□□□□ -0.61
TNC-207ENST00000481475 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
TNC-207ENST00000481475 SPATA31A6Q5VVP1 1343 aa11.23□□□□□ -0.61
TNC-207ENST00000481475 PLCH2O75038 1416 aa11.22□□□□□ -0.61
TNC-207ENST00000481475 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
TNC-207ENST00000481475 MLH3Q9UHC1 1453 aa11.21□□□□□ -0.61
TNC-207ENST00000481475 AFAP1Q8N556 730 aa11.21□□□□□ -0.61
TNC-207ENST00000481475 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
TNC-207ENST00000481475 ABCC1P33527 1531 aa11.2□□□□□ -0.62
TNC-207ENST00000481475 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
TNC-207ENST00000481475 ANKLE2Q86XL3 938 aa11.2□□□□□ -0.62
TNC-207ENST00000481475 ITSN2Q9NZM3 1697 aa11.19□□□□□ -0.62
TNC-207ENST00000481475 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
TNC-207ENST00000481475 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
TNC-207ENST00000481475 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
TNC-207ENST00000481475 UTRNP46939 3433 aa11.18□□□□□ -0.62
TNC-207ENST00000481475 SHPRHQ149N8 1683 aa11.17□□□□□ -0.62
TNC-207ENST00000481475 ZC3H13Q5T200 1668 aaKnown RBP11.17□□□□□ -0.62
TNC-207ENST00000481475 NWD1Q149M9 1564 aa11.17□□□□□ -0.62
TNC-207ENST00000481475 C1QTNF8P60827 252 aa11.17□□□□□ -0.62
TNC-207ENST00000481475 RBM6P78332 1123 aaKnown RBP11.17□□□□□ -0.62
TNC-207ENST00000481475 KDM5DQ9BY66 1539 aa11.17□□□□□ -0.62
TNC-207ENST00000481475 AFF2P51816 1311 aa11.16□□□□□ -0.62
TNC-207ENST00000481475 CCDC125Q86Z20 511 aa11.15□□□□□ -0.62
TNC-207ENST00000481475 PLEKHD1A6NEE1 506 aa11.14□□□□□ -0.63
TNC-207ENST00000481475 HRCP23327 699 aa11.14□□□□□ -0.63
TNC-207ENST00000481475 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
TNC-207ENST00000481475 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
TNC-207ENST00000481475 KIDINS220Q9ULH0 1771 aa11.13□□□□□ -0.63
TNC-207ENST00000481475 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
TNC-207ENST00000481475 ZNF784Q8NCA9 323 aaPredicted RBP11.12□□□□□ -0.63
TNC-207ENST00000481475 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
TNC-207ENST00000481475 QTRT2Q9H974 415 aaKnown RBP11.11□□□□□ -0.63
TNC-207ENST00000481475 MYO5CQ9NQX4 1742 aa11.11□□□□□ -0.63
TNC-207ENST00000481475 ATP7AQ04656 1500 aa11.1□□□□□ -0.63
TNC-207ENST00000481475 EFCAB2Q5VUJ9 269 aa11.1□□□□□ -0.63
TNC-207ENST00000481475 UGGT1Q9NYU2 1555 aa11.08□□□□□ -0.64
TNC-207ENST00000481475 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
TNC-207ENST00000481475 TNRQ92752 1358 aa11.08□□□□□ -0.64
TNC-207ENST00000481475 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
TNC-207ENST00000481475 KIF14Q15058 1648 aa11.08□□□□□ -0.64
TNC-207ENST00000481475 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
TNC-207ENST00000481475 THEMISQ8N1K5 641 aaPredicted RBP11.07□□□□□ -0.64
TNC-207ENST00000481475 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
TNC-207ENST00000481475 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
TNC-207ENST00000481475 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
TNC-207ENST00000481475 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
TNC-207ENST00000481475 PLXNC1O60486 1568 aa11.05□□□□□ -0.64
TNC-207ENST00000481475 BLMP54132 1417 aaPredicted RBP11.05□□□□□ -0.64
TNC-207ENST00000481475 DEFB132Q7Z7B7 95 aa11.05□□□□□ -0.64
TNC-207ENST00000481475 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
TNC-207ENST00000481475 AHDC1Q5TGY3 1603 aaPredicted RBP11.05□□□□□ -0.64
TNC-207ENST00000481475 TIAM1Q13009 1591 aa11.03□□□□□ -0.64
TNC-207ENST00000481475 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
TNC-207ENST00000481475 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
TNC-207ENST00000481475 SCAF11Q99590 1463 aaKnown RBP11.02□□□□□ -0.65
TNC-207ENST00000481475 ARHGAP5Q13017 1502 aa11.02□□□□□ -0.65
TNC-207ENST00000481475 ADGBQ8N7X0 1667 aa11.01□□□□□ -0.65
TNC-207ENST00000481475 FBXO31Q5XUX0 539 aaPredicted RBP11.01□□□□□ -0.65
TNC-207ENST00000481475 SLAIN2Q9P270 581 aa11.01□□□□□ -0.65
TNC-207ENST00000481475 C8orf37Q96NL8 207 aa10.99□□□□□ -0.65
TNC-207ENST00000481475 PZPP20742 1482 aa10.99□□□□□ -0.65
TNC-207ENST00000481475 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
TNC-207ENST00000481475 ABCC3O15438 1527 aa10.97□□□□□ -0.65
TNC-207ENST00000481475 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.65
TNC-207ENST00000481475 MIA2Q96PC5 1412 aa10.96□□□□□ -0.65
TNC-207ENST00000481475 GGT6Q6P531 493 aa10.96□□□□□ -0.65
TNC-207ENST00000481475 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
TNC-207ENST00000481475 MSH6P52701 1360 aa10.95□□□□□ -0.66
TNC-207ENST00000481475 KDM5AP29375 1690 aaKnown RBP10.95□□□□□ -0.66
TNC-207ENST00000481475 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
TNC-207ENST00000481475 CDC42BPBQ9Y5S2 1711 aa10.94□□□□□ -0.66
TNC-207ENST00000481475 PROM2Q8N271 834 aa10.93□□□□□ -0.66
TNC-207ENST00000481475 A2MP01023 1474 aa10.93□□□□□ -0.66
TNC-207ENST00000481475 ATRNO75882 1429 aa10.92□□□□□ -0.66
TNC-207ENST00000481475 UNC13BO14795 1591 aa10.92□□□□□ -0.66
TNC-207ENST00000481475 CAPN15O75808 1086 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms