RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 TSHZ2Q9NRE2 1034 aa19.4■□□□□ 0.7
PHF3-204ENST00000481385 NEFLP07196 543 aa19.39■□□□□ 0.69
PHF3-204ENST00000481385 PLXNC1O60486 1568 aa19.39■□□□□ 0.69
PHF3-204ENST00000481385 PLCH2O75038 1416 aa19.37■□□□□ 0.69
PHF3-204ENST00000481385 ST20-MTHFSA0A0A6YYL1 179 aa19.36■□□□□ 0.69
PHF3-204ENST00000481385 UHRF1BP1LA0JNW5 1464 aa19.36■□□□□ 0.69
PHF3-204ENST00000481385 CCDC144AA2RUR9 1427 aa19.35■□□□□ 0.69
PHF3-204ENST00000481385 RGL3Q3MIN7 710 aa19.34■□□□□ 0.69
PHF3-204ENST00000481385 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
PHF3-204ENST00000481385 IQGAP3Q86VI3 1631 aa19.33■□□□□ 0.69
PHF3-204ENST00000481385 ABCC1P33527 1531 aa19.33■□□□□ 0.68
PHF3-204ENST00000481385 DUOX2Q9NRD8 1548 aa19.32■□□□□ 0.68
PHF3-204ENST00000481385 PRAG1Q86YV5 1406 aa19.32■□□□□ 0.68
PHF3-204ENST00000481385 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
PHF3-204ENST00000481385 IRX6P78412 446 aaPredicted RBP19.32■□□□□ 0.68
PHF3-204ENST00000481385 ARID4BQ4LE39 1312 aaPredicted RBP19.32■□□□□ 0.68
PHF3-204ENST00000481385 A2MP01023 1474 aa19.31■□□□□ 0.68
PHF3-204ENST00000481385 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
PHF3-204ENST00000481385 EFCAB2Q5VUJ9 269 aa19.3■□□□□ 0.68
PHF3-204ENST00000481385 TRPM1Q7Z4N2 1603 aa19.3■□□□□ 0.68
PHF3-204ENST00000481385 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
PHF3-204ENST00000481385 ERBINQ96RT1 1412 aa19.29■□□□□ 0.68
PHF3-204ENST00000481385 ZBED9Q6R2W3 1325 aa19.27■□□□□ 0.68
PHF3-204ENST00000481385 AFAP1Q8N556 730 aa19.26■□□□□ 0.67
PHF3-204ENST00000481385 ATP10AO60312 1499 aa19.22■□□□□ 0.67
PHF3-204ENST00000481385 E9PCH4 1651 aa19.22■□□□□ 0.67
PHF3-204ENST00000481385 SENP3-EIF4A1A0A087X0R7 540 aa19.21■□□□□ 0.67
PHF3-204ENST00000481385 ZFYVE16Q7Z3T8 1539 aa19.21■□□□□ 0.67
PHF3-204ENST00000481385 GPRASP1Q5JY77 1395 aa19.21■□□□□ 0.67
PHF3-204ENST00000481385 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
PHF3-204ENST00000481385 WDR7Q9Y4E6 1490 aa19.19■□□□□ 0.66
PHF3-204ENST00000481385 PRDM15P57071 1507 aaPredicted RBP19.17■□□□□ 0.66
PHF3-204ENST00000481385 ARAP3Q8WWN8 1544 aa19.17■□□□□ 0.66
PHF3-204ENST00000481385 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
PHF3-204ENST00000481385 DISP3Q9P2K9 1392 aa19.16■□□□□ 0.66
PHF3-204ENST00000481385 TESK2Q96S53 571 aa19.15■□□□□ 0.66
PHF3-204ENST00000481385 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
PHF3-204ENST00000481385 FANCAO15360 1455 aa19.15■□□□□ 0.66
PHF3-204ENST00000481385 ABCA9Q8IUA7 1624 aa19.14■□□□□ 0.65
PHF3-204ENST00000481385 LAMC1P11047 1609 aa19.14■□□□□ 0.65
PHF3-204ENST00000481385 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
PHF3-204ENST00000481385 COL17A1Q9UMD9 1497 aaPredicted RBP19.13■□□□□ 0.65
PHF3-204ENST00000481385 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
PHF3-204ENST00000481385 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
PHF3-204ENST00000481385 ATP7AQ04656 1500 aa19.11■□□□□ 0.65
PHF3-204ENST00000481385 DEPDC5O75140 1603 aa19.11■□□□□ 0.65
PHF3-204ENST00000481385 PER1O15534 1290 aaPredicted RBP19.1■□□□□ 0.65
PHF3-204ENST00000481385 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
PHF3-204ENST00000481385 RNF17Q9BXT8 1623 aaKnown RBP19.1■□□□□ 0.65
PHF3-204ENST00000481385 TRPM2O94759 1503 aa19.1■□□□□ 0.65
PHF3-204ENST00000481385 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
PHF3-204ENST00000481385 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.65
PHF3-204ENST00000481385 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.65
PHF3-204ENST00000481385 LRPPRCP42704 1394 aaKnown RBP19.08■□□□□ 0.65
PHF3-204ENST00000481385 RALBP1Q15311 655 aa19.08■□□□□ 0.65
PHF3-204ENST00000481385 ADGRL1O94910 1474 aa19.08■□□□□ 0.64
PHF3-204ENST00000481385 CLTCL1P53675 1640 aa19.08■□□□□ 0.64
PHF3-204ENST00000481385 MADDQ8WXG6 1647 aa19.08■□□□□ 0.64
PHF3-204ENST00000481385 PTPRTO14522 1441 aa19.07■□□□□ 0.64
PHF3-204ENST00000481385 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
PHF3-204ENST00000481385 PARD3Q8TEW0 1356 aa19.07■□□□□ 0.64
PHF3-204ENST00000481385 SPHKAPQ2M3C7 1700 aa19.07■□□□□ 0.64
PHF3-204ENST00000481385 KTN1Q86UP2 1357 aaKnown RBP19.06■□□□□ 0.64
PHF3-204ENST00000481385 VWDEQ8N2E2 1590 aa19.05■□□□□ 0.64
PHF3-204ENST00000481385 KIF3BO15066 747 aa19.05■□□□□ 0.64
PHF3-204ENST00000481385 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
PHF3-204ENST00000481385 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
PHF3-204ENST00000481385 CEP152O94986 1710 aa19.04■□□□□ 0.64
PHF3-204ENST00000481385 TET3O43151 1660 aa19.04■□□□□ 0.64
PHF3-204ENST00000481385 PPP4R2Q9NY27 417 aa19.04■□□□□ 0.64
PHF3-204ENST00000481385 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
PHF3-204ENST00000481385 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
PHF3-204ENST00000481385 MYT1LQ9UL68 1186 aa19.03■□□□□ 0.64
PHF3-204ENST00000481385 PANK3Q9H999 370 aa19.03■□□□□ 0.64
PHF3-204ENST00000481385 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.63
PHF3-204ENST00000481385 UGGT1Q9NYU2 1555 aa19.01■□□□□ 0.63
PHF3-204ENST00000481385 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
PHF3-204ENST00000481385 TMF1P82094 1093 aa19■□□□□ 0.63
PHF3-204ENST00000481385 NLRP13Q86W25 1043 aa19■□□□□ 0.63
PHF3-204ENST00000481385 IQGAP1P46940 1657 aa18.99■□□□□ 0.63
PHF3-204ENST00000481385 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
PHF3-204ENST00000481385 KANK1Q14678 1352 aa18.98■□□□□ 0.63
PHF3-204ENST00000481385 RNF123Q5XPI4 1314 aa18.97■□□□□ 0.63
PHF3-204ENST00000481385 SALL2Q9Y467 1007 aaPredicted RBP18.95■□□□□ 0.62
PHF3-204ENST00000481385 SCAF11Q99590 1463 aaKnown RBP18.94■□□□□ 0.62
PHF3-204ENST00000481385 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
PHF3-204ENST00000481385 EFCAB6Q5THR3 1501 aa18.92■□□□□ 0.62
PHF3-204ENST00000481385 PPRC1Q5VV67 1664 aaKnown RBP18.92■□□□□ 0.62
PHF3-204ENST00000481385 ZNF518AQ6AHZ1 1483 aa18.91■□□□□ 0.62
PHF3-204ENST00000481385 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
PHF3-204ENST00000481385 ADGRF5Q8IZF2 1346 aa18.91■□□□□ 0.62
PHF3-204ENST00000481385 CFAP70Q5T0N1 1121 aa18.89■□□□□ 0.62
PHF3-204ENST00000481385 MROH2AA6NES4 1674 aa18.89■□□□□ 0.61
PHF3-204ENST00000481385 CD109Q6YHK3 1445 aa18.88■□□□□ 0.61
PHF3-204ENST00000481385 FRMPD1Q5SYB0 1578 aa18.88■□□□□ 0.61
PHF3-204ENST00000481385 ABCA6Q8N139 1617 aa18.88■□□□□ 0.61
PHF3-204ENST00000481385 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
PHF3-204ENST00000481385 STAC3Q96MF2 364 aa18.87■□□□□ 0.61
PHF3-204ENST00000481385 NEURL4Q96JN8 1562 aa18.87■□□□□ 0.61
PHF3-204ENST00000481385 MAP3K4Q9Y6R4 1608 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms