RNA–Protein interactions for RNA: ENST00000481383.1

FXR1-215, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 909 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-215ENST00000481383 FBXW7Q969H0 707 aa13.61□□□□□ -0.23
FXR1-215ENST00000481383 RABGEF1Q9UJ41 708 aa13.58□□□□□ -0.24
FXR1-215ENST00000481383 C6orf132Q5T0Z8 1188 aa13.54□□□□□ -0.24
FXR1-215ENST00000481383 EPAS1Q99814 870 aa13.54□□□□□ -0.24
FXR1-215ENST00000481383 DDX12PQ92771 950 aa13.52□□□□□ -0.25
FXR1-215ENST00000481383 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
FXR1-215ENST00000481383 KIAA1468Q9P260 1216 aa13.51□□□□□ -0.25
FXR1-215ENST00000481383 ANKK1Q8NFD2 765 aa13.49□□□□□ -0.25
FXR1-215ENST00000481383 BCAMP50895 628 aa13.48□□□□□ -0.25
FXR1-215ENST00000481383 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
FXR1-215ENST00000481383 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
FXR1-215ENST00000481383 PDIA6Q15084 440 aa13.46□□□□□ -0.25
FXR1-215ENST00000481383 LAPTM4BQ86VI4 370 aa13.46□□□□□ -0.25
FXR1-215ENST00000481383 SEPT9Q9UHD8 586 aaPredicted RBP13.46□□□□□ -0.25
FXR1-215ENST00000481383 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
FXR1-215ENST00000481383 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
FXR1-215ENST00000481383 ZFRQ96KR1 1074 aaKnown RBP13.44□□□□□ -0.26
FXR1-215ENST00000481383 SOWAHBA6NEL2 793 aa13.43□□□□□ -0.26
FXR1-215ENST00000481383 NBR1Q14596 966 aa13.43□□□□□ -0.26
FXR1-215ENST00000481383 TSR1Q2NL82 804 aaKnown RBP13.43□□□□□ -0.26
FXR1-215ENST00000481383 A0A0G2JS52 829 aa13.42□□□□□ -0.26
FXR1-215ENST00000481383 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
FXR1-215ENST00000481383 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
FXR1-215ENST00000481383 RTN4Q9NQC3 1192 aaKnown RBP13.41□□□□□ -0.26
FXR1-215ENST00000481383 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
FXR1-215ENST00000481383 MAP3K7O43318 606 aa13.38□□□□□ -0.27
FXR1-215ENST00000481383 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
FXR1-215ENST00000481383 E2F4Q16254 413 aa13.37□□□□□ -0.27
FXR1-215ENST00000481383 PAXIP1Q6ZW49 1069 aaPredicted RBP13.37□□□□□ -0.27
FXR1-215ENST00000481383 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
FXR1-215ENST00000481383 WBP1LQ9NX94 342 aa13.37□□□□□ -0.27
FXR1-215ENST00000481383 TSKSQ9UJT2 592 aa13.37□□□□□ -0.27
FXR1-215ENST00000481383 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
FXR1-215ENST00000481383 ITGBL1O95965 494 aaPredicted RBP13.36□□□□□ -0.27
FXR1-215ENST00000481383 FAM98CQ17RN3 349 aaKnown RBP13.36□□□□□ -0.27
FXR1-215ENST00000481383 RGS20O76081 388 aa13.33□□□□□ -0.28
FXR1-215ENST00000481383 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
FXR1-215ENST00000481383 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
FXR1-215ENST00000481383 FAM198AQ9UFP1 575 aa13.3□□□□□ -0.28
FXR1-215ENST00000481383 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
FXR1-215ENST00000481383 NYAP1Q6ZVC0 841 aa13.29□□□□□ -0.28
FXR1-215ENST00000481383 PACS2Q86VP3 889 aa13.29□□□□□ -0.28
FXR1-215ENST00000481383 LRCH3Q96II8 777 aa13.29□□□□□ -0.28
FXR1-215ENST00000481383 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
FXR1-215ENST00000481383 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
FXR1-215ENST00000481383 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
FXR1-215ENST00000481383 C3orf80F5H4A9 247 aa13.27□□□□□ -0.29
FXR1-215ENST00000481383 SMAPO00193 183 aa13.27□□□□□ -0.29
FXR1-215ENST00000481383 TSR3Q9UJK0 312 aaKnown RBP13.27□□□□□ -0.29
FXR1-215ENST00000481383 PRSS12P56730 875 aa13.26□□□□□ -0.29
FXR1-215ENST00000481383 CDHR5Q9HBB8 845 aa13.25□□□□□ -0.29
FXR1-215ENST00000481383 OSBPP22059 807 aa13.24□□□□□ -0.29
FXR1-215ENST00000481383 KCNC4Q03721 635 aa13.21□□□□□ -0.29
FXR1-215ENST00000481383 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
FXR1-215ENST00000481383 SAMD7Q7Z3H4 446 aa13.2□□□□□ -0.3
FXR1-215ENST00000481383 CERKQ8TCT0 537 aa13.2□□□□□ -0.3
FXR1-215ENST00000481383 TATDN2Q93075 761 aa13.18□□□□□ -0.3
FXR1-215ENST00000481383 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
FXR1-215ENST00000481383 PPP4CP60510 307 aa13.16□□□□□ -0.3
FXR1-215ENST00000481383 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
FXR1-215ENST00000481383 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
FXR1-215ENST00000481383 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
FXR1-215ENST00000481383 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
FXR1-215ENST00000481383 TJAP1Q5JTD0 557 aa13.1□□□□□ -0.31
FXR1-215ENST00000481383 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
FXR1-215ENST00000481383 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
FXR1-215ENST00000481383 PADI6Q6TGC4 694 aa13.08□□□□□ -0.32
FXR1-215ENST00000481383 RNF40O75150 1001 aa13.06□□□□□ -0.32
FXR1-215ENST00000481383 MTRQ99707 1265 aa13.06□□□□□ -0.32
FXR1-215ENST00000481383 MLLT3P42568 568 aaPredicted RBP13.05□□□□□ -0.32
FXR1-215ENST00000481383 APLP1P51693 650 aa13.03□□□□□ -0.32
FXR1-215ENST00000481383 SWT1Q5T5J6 900 aaKnown RBP13.02□□□□□ -0.33
FXR1-215ENST00000481383 KCNV2Q8TDN2 545 aa13.02□□□□□ -0.33
FXR1-215ENST00000481383 IL21Q9HBE4 155 aa13.01□□□□□ -0.33
FXR1-215ENST00000481383 ZNF516Q92618 1163 aa13□□□□□ -0.33
FXR1-215ENST00000481383 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
FXR1-215ENST00000481383 HDGFP51858 240 aaKnown RBP12.99□□□□□ -0.33
FXR1-215ENST00000481383 EYA1Q99502 592 aa12.98□□□□□ -0.33
FXR1-215ENST00000481383 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
FXR1-215ENST00000481383 Q6ZNB5 142 aa12.95□□□□□ -0.34
FXR1-215ENST00000481383 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
FXR1-215ENST00000481383 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
FXR1-215ENST00000481383 PTGDRQ13258 359 aa12.92□□□□□ -0.34
FXR1-215ENST00000481383 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
FXR1-215ENST00000481383 COPS2P61201 443 aa12.91□□□□□ -0.34
FXR1-215ENST00000481383 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
FXR1-215ENST00000481383 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
FXR1-215ENST00000481383 LCE2BO14633 110 aa12.86□□□□□ -0.35
FXR1-215ENST00000481383 GFRA3O60609 400 aa12.86□□□□□ -0.35
FXR1-215ENST00000481383 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
FXR1-215ENST00000481383 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
FXR1-215ENST00000481383 DNAJB2P25686 324 aa12.84□□□□□ -0.35
FXR1-215ENST00000481383 LAPTM4AQ15012 233 aa12.84□□□□□ -0.35
FXR1-215ENST00000481383 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
FXR1-215ENST00000481383 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
FXR1-215ENST00000481383 ZPR1O75312 459 aa12.82□□□□□ -0.36
FXR1-215ENST00000481383 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
FXR1-215ENST00000481383 TMEM134Q9H6X4 195 aa12.82□□□□□ -0.36
FXR1-215ENST00000481383 SEMA3EO15041 775 aa12.81□□□□□ -0.36
FXR1-215ENST00000481383 RBM46Q8TBY0 533 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms