RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 CDK11AQ9UQ88 783 aaPredicted RBP7.67□□□□□ -1.18
RTN1-206ENST00000481205 PTPRGP23470 1445 aa7.66□□□□□ -1.18
RTN1-206ENST00000481205 TONSLQ96HA7 1378 aa7.66□□□□□ -1.18
RTN1-206ENST00000481205 ZCCHC11Q5TAX3 1644 aaKnown RBP7.66□□□□□ -1.18
RTN1-206ENST00000481205 TRIM52Q96A61 297 aa7.66□□□□□ -1.18
RTN1-206ENST00000481205 CFDP1Q9UEE9 299 aaPredicted RBP7.66□□□□□ -1.18
RTN1-206ENST00000481205 ABCC5O15440 1437 aa7.66□□□□□ -1.18
RTN1-206ENST00000481205 MIA2Q96PC5 1412 aa7.66□□□□□ -1.18
RTN1-206ENST00000481205 DENND4BO75064 1496 aaPredicted RBP7.65□□□□□ -1.18
RTN1-206ENST00000481205 PLCD3Q8N3E9 789 aa7.65□□□□□ -1.18
RTN1-206ENST00000481205 GPATCH8Q9UKJ3 1502 aaKnown RBP7.65□□□□□ -1.18
RTN1-206ENST00000481205 GLIPR1L2Q4G1C9 344 aa7.65□□□□□ -1.18
RTN1-206ENST00000481205 DAPK1P53355 1430 aa7.65□□□□□ -1.18
RTN1-206ENST00000481205 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.19
RTN1-206ENST00000481205 UACAQ9BZF9 1416 aa7.65□□□□□ -1.19
RTN1-206ENST00000481205 CROCC2H7BZ55 1655 aa7.64□□□□□ -1.19
RTN1-206ENST00000481205 PLEKHD1A6NEE1 506 aa7.64□□□□□ -1.19
RTN1-206ENST00000481205 SPOCK2Q92563 424 aa7.64□□□□□ -1.19
RTN1-206ENST00000481205 NEUROD2Q15784 382 aa7.64□□□□□ -1.19
RTN1-206ENST00000481205 ARAP3Q8WWN8 1544 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 AAMPQ13685 434 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 CAMSAP2Q08AD1 1489 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 RIMBP3CA6NJZ7 1639 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 RIMBP3BA6NNM3 1639 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 RIMBP3Q9UFD9 1639 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 OSCARQ8IYS5 282 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 ITSN2Q9NZM3 1697 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 CDC42BPAQ5VT25 1732 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 PROM2Q8N271 834 aa7.63□□□□□ -1.19
RTN1-206ENST00000481205 PREX2Q70Z35 1606 aa7.62□□□□□ -1.19
RTN1-206ENST00000481205 MSH5O43196 834 aa7.62□□□□□ -1.19
RTN1-206ENST00000481205 ABCC10Q5T3U5 1492 aa7.62□□□□□ -1.19
RTN1-206ENST00000481205 ZMYND15Q9H091 742 aa7.61□□□□□ -1.19
RTN1-206ENST00000481205 MPHOSPH9Q99550 1183 aa7.61□□□□□ -1.19
RTN1-206ENST00000481205 DNMT1P26358 1616 aaKnown RBP7.61□□□□□ -1.19
RTN1-206ENST00000481205 GCC2Q8IWJ2 1684 aa7.61□□□□□ -1.19
RTN1-206ENST00000481205 ABCA9Q8IUA7 1624 aa7.61□□□□□ -1.19
RTN1-206ENST00000481205 HNRNPMP52272 730 aaKnown RBP eCLIP7.61□□□□□ -1.19
RTN1-206ENST00000481205 SPINK5Q9NQ38 1064 aaPredicted RBP7.6□□□□□ -1.19
RTN1-206ENST00000481205 CCER2I3L3R5 266 aa7.6□□□□□ -1.19
RTN1-206ENST00000481205 AKNAQ7Z591 1439 aa7.6□□□□□ -1.19
RTN1-206ENST00000481205 GLI2P10070 1586 aa7.59□□□□□ -1.19
RTN1-206ENST00000481205 RBM10P98175 930 aaKnown RBP7.59□□□□□ -1.19
RTN1-206ENST00000481205 POLA2Q14181 598 aa7.59□□□□□ -1.19
RTN1-206ENST00000481205 CDC42BPBQ9Y5S2 1711 aa7.59□□□□□ -1.19
RTN1-206ENST00000481205 NCOA1Q15788 1441 aa7.58□□□□□ -1.2
RTN1-206ENST00000481205 ROCK1Q13464 1354 aa7.58□□□□□ -1.2
RTN1-206ENST00000481205 LMOD2Q6P5Q4 547 aa7.58□□□□□ -1.2
RTN1-206ENST00000481205 SLC24A3Q9HC58 644 aa7.58□□□□□ -1.2
RTN1-206ENST00000481205 MAP3K4Q9Y6R4 1608 aa7.57□□□□□ -1.2
RTN1-206ENST00000481205 C1orf115Q9H7X2 142 aa7.57□□□□□ -1.2
RTN1-206ENST00000481205 MAST1Q9Y2H9 1570 aa7.57□□□□□ -1.2
RTN1-206ENST00000481205 MYO5CQ9NQX4 1742 aa7.57□□□□□ -1.2
RTN1-206ENST00000481205 SAMD1Q6SPF0 538 aaPredicted RBP7.57□□□□□ -1.2
RTN1-206ENST00000481205 GPBP1L1Q9HC44 474 aaPredicted RBP7.57□□□□□ -1.2
RTN1-206ENST00000481205 ADGBQ8N7X0 1667 aa7.56□□□□□ -1.2
RTN1-206ENST00000481205 ARHGEF5Q12774 1597 aa7.56□□□□□ -1.2
RTN1-206ENST00000481205 TTC37Q6PGP7 1564 aa7.56□□□□□ -1.2
RTN1-206ENST00000481205 DHX37Q8IY37 1157 aaKnown RBP7.56□□□□□ -1.2
RTN1-206ENST00000481205 CHMP4AQ9BY43 222 aa7.56□□□□□ -1.2
RTN1-206ENST00000481205 HNRNPUQ00839 825 aaKnown RBP eCLIP7.55□□□□□ -1.2
RTN1-206ENST00000481205 L3MBTL2Q969R5 705 aa7.55□□□□□ -1.2
RTN1-206ENST00000481205 PPRC1Q5VV67 1664 aaKnown RBP7.55□□□□□ -1.2
RTN1-206ENST00000481205 BCORL1Q5H9F3 1711 aa7.55□□□□□ -1.2
RTN1-206ENST00000481205 PZPP20742 1482 aa7.55□□□□□ -1.2
RTN1-206ENST00000481205 C9orf84Q5VXU9 1444 aa7.55□□□□□ -1.2
RTN1-206ENST00000481205 ANKRD30BQ9BXX2 1392 aa7.54□□□□□ -1.2
RTN1-206ENST00000481205 MBD5Q9P267 1494 aa7.54□□□□□ -1.2
RTN1-206ENST00000481205 ABCB7O75027 752 aa7.54□□□□□ -1.2
RTN1-206ENST00000481205 KCNV2Q8TDN2 545 aa7.54□□□□□ -1.2
RTN1-206ENST00000481205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.54□□□□□ -1.2
RTN1-206ENST00000481205 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
RTN1-206ENST00000481205 ANKRD30AQ9BXX3 1397 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 ANKRD50Q9ULJ7 1429 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 GTPBP6O43824 516 aaPredicted RBP7.53□□□□□ -1.2
RTN1-206ENST00000481205 BRD2P25440 801 aaKnown RBP7.53□□□□□ -1.2
RTN1-206ENST00000481205 CFAP74Q9C0B2 1584 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 ADGRL2O95490 1459 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 TSPY4P0CV99 314 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 TSPY10P0CW01 314 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 EIF4G2P78344 907 aaKnown RBP eCLIP7.53□□□□□ -1.2
RTN1-206ENST00000481205 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 IL27Q8NEV9 243 aa7.53□□□□□ -1.2
RTN1-206ENST00000481205 HSPA5P11021 654 aaKnown RBP7.52□□□□□ -1.21
RTN1-206ENST00000481205 RSPH6AQ9H0K4 717 aa7.52□□□□□ -1.21
RTN1-206ENST00000481205 DNAJC5Q9H3Z4 198 aa7.52□□□□□ -1.21
RTN1-206ENST00000481205 SYCP2Q9BX26 1530 aa7.52□□□□□ -1.21
RTN1-206ENST00000481205 KIF13AQ9H1H9 1805 aa7.52□□□□□ -1.21
RTN1-206ENST00000481205 KIF15Q9NS87 1388 aa7.52□□□□□ -1.21
RTN1-206ENST00000481205 ARHGAP5Q13017 1502 aa7.52□□□□□ -1.21
RTN1-206ENST00000481205 ARHGEF12Q9NZN5 1544 aa7.51□□□□□ -1.21
RTN1-206ENST00000481205 SHANK2Q9UPX8 1470 aa7.51□□□□□ -1.21
RTN1-206ENST00000481205 NUP155O75694 1391 aa7.51□□□□□ -1.21
RTN1-206ENST00000481205 STK25O00506 426 aa7.51□□□□□ -1.21
RTN1-206ENST00000481205 PLXNC1O60486 1568 aa7.51□□□□□ -1.21
RTN1-206ENST00000481205 RBM19Q9Y4C8 960 aaKnown RBP7.51□□□□□ -1.21
RTN1-206ENST00000481205 IRX6P78412 446 aaPredicted RBP7.5□□□□□ -1.21
RTN1-206ENST00000481205 DIP2BQ9P265 1576 aa7.5□□□□□ -1.21
RTN1-206ENST00000481205 RPRD2Q5VT52 1461 aaKnown RBP7.49□□□□□ -1.21
RTN1-206ENST00000481205 CCDC141Q6ZP82 1450 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms