RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 RBM33Q96EV2 1170 aaKnown RBP12.7□□□□□ -0.38
PTPN12-211ENST00000481154 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
PTPN12-211ENST00000481154 NBR1Q14596 966 aa12.69□□□□□ -0.38
PTPN12-211ENST00000481154 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
PTPN12-211ENST00000481154 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
PTPN12-211ENST00000481154 EPAS1Q99814 870 aa12.67□□□□□ -0.38
PTPN12-211ENST00000481154 COL9A1P20849 921 aa12.66□□□□□ -0.38
PTPN12-211ENST00000481154 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
PTPN12-211ENST00000481154 ZBED2Q9BTP6 218 aa12.65□□□□□ -0.38
PTPN12-211ENST00000481154 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
PTPN12-211ENST00000481154 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
PTPN12-211ENST00000481154 MAP3K7O43318 606 aa12.62□□□□□ -0.39
PTPN12-211ENST00000481154 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
PTPN12-211ENST00000481154 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
PTPN12-211ENST00000481154 KCTD12Q96CX2 325 aaKnown RBP12.62□□□□□ -0.39
PTPN12-211ENST00000481154 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
PTPN12-211ENST00000481154 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
PTPN12-211ENST00000481154 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
PTPN12-211ENST00000481154 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
PTPN12-211ENST00000481154 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
PTPN12-211ENST00000481154 P3H3Q8IVL6 736 aa12.58□□□□□ -0.4
PTPN12-211ENST00000481154 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
PTPN12-211ENST00000481154 OSBPP22059 807 aa12.56□□□□□ -0.4
PTPN12-211ENST00000481154 MLLT3P42568 568 aaPredicted RBP12.56□□□□□ -0.4
PTPN12-211ENST00000481154 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
PTPN12-211ENST00000481154 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
PTPN12-211ENST00000481154 SEMA3EO15041 775 aa12.5□□□□□ -0.41
PTPN12-211ENST00000481154 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
PTPN12-211ENST00000481154 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
PTPN12-211ENST00000481154 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
PTPN12-211ENST00000481154 RABGEF1Q9UJ41 708 aa12.49□□□□□ -0.41
PTPN12-211ENST00000481154 PTPN5P54829 565 aa12.48□□□□□ -0.41
PTPN12-211ENST00000481154 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
PTPN12-211ENST00000481154 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
PTPN12-211ENST00000481154 GOLGA8CPA6NN73 597 aa12.45□□□□□ -0.42
PTPN12-211ENST00000481154 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
PTPN12-211ENST00000481154 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
PTPN12-211ENST00000481154 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
PTPN12-211ENST00000481154 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
PTPN12-211ENST00000481154 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
PTPN12-211ENST00000481154 PRSS12P56730 875 aa12.41□□□□□ -0.42
PTPN12-211ENST00000481154 WNT2BQ93097 391 aa12.41□□□□□ -0.42
PTPN12-211ENST00000481154 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
PTPN12-211ENST00000481154 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
PTPN12-211ENST00000481154 CERKQ8TCT0 537 aa12.4□□□□□ -0.42
PTPN12-211ENST00000481154 NPDC1Q9NQX5 325 aaPredicted RBP12.39□□□□□ -0.43
PTPN12-211ENST00000481154 C3orf80F5H4A9 247 aa12.38□□□□□ -0.43
PTPN12-211ENST00000481154 SMAPO00193 183 aa12.37□□□□□ -0.43
PTPN12-211ENST00000481154 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
PTPN12-211ENST00000481154 TESPA1A2RU30 521 aaPredicted RBP12.36□□□□□ -0.43
PTPN12-211ENST00000481154 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
PTPN12-211ENST00000481154 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
PTPN12-211ENST00000481154 PADI6Q6TGC4 694 aa12.35□□□□□ -0.43
PTPN12-211ENST00000481154 ZFRQ96KR1 1074 aaKnown RBP12.35□□□□□ -0.43
PTPN12-211ENST00000481154 BCAMP50895 628 aa12.34□□□□□ -0.43
PTPN12-211ENST00000481154 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
PTPN12-211ENST00000481154 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
PTPN12-211ENST00000481154 ANKK1Q8NFD2 765 aa12.34□□□□□ -0.43
PTPN12-211ENST00000481154 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
PTPN12-211ENST00000481154 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
PTPN12-211ENST00000481154 PTGDRQ13258 359 aa12.31□□□□□ -0.44
PTPN12-211ENST00000481154 TATDN2Q93075 761 aa12.31□□□□□ -0.44
PTPN12-211ENST00000481154 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
PTPN12-211ENST00000481154 NBPF26B4DH59 902 aa12.3□□□□□ -0.44
PTPN12-211ENST00000481154 NUDT18Q6ZVK8 323 aa12.3□□□□□ -0.44
PTPN12-211ENST00000481154 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
PTPN12-211ENST00000481154 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
PTPN12-211ENST00000481154 A0A0G2JS52 829 aa12.27□□□□□ -0.45
PTPN12-211ENST00000481154 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
PTPN12-211ENST00000481154 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.25□□□□□ -0.45
PTPN12-211ENST00000481154 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
PTPN12-211ENST00000481154 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
PTPN12-211ENST00000481154 FCHSD2O94868 740 aa12.23□□□□□ -0.45
PTPN12-211ENST00000481154 RGS20O76081 388 aa12.22□□□□□ -0.45
PTPN12-211ENST00000481154 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
PTPN12-211ENST00000481154 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
PTPN12-211ENST00000481154 HPS5Q9UPZ3 1129 aa12.21□□□□□ -0.45
PTPN12-211ENST00000481154 EYA1Q99502 592 aa12.18□□□□□ -0.46
PTPN12-211ENST00000481154 GPR37O15354 613 aa12.17□□□□□ -0.46
PTPN12-211ENST00000481154 RNF40O75150 1001 aa12.17□□□□□ -0.46
PTPN12-211ENST00000481154 ITGBL1O95965 494 aaPredicted RBP12.17□□□□□ -0.46
PTPN12-211ENST00000481154 FECHP22830 423 aa12.17□□□□□ -0.46
PTPN12-211ENST00000481154 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
PTPN12-211ENST00000481154 ADGRG1Q9Y653 693 aa12.16□□□□□ -0.46
PTPN12-211ENST00000481154 HIC1Q14526 733 aa12.15□□□□□ -0.46
PTPN12-211ENST00000481154 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.46
PTPN12-211ENST00000481154 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.46
PTPN12-211ENST00000481154 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
PTPN12-211ENST00000481154 PPP4CP60510 307 aa12.13□□□□□ -0.47
PTPN12-211ENST00000481154 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
PTPN12-211ENST00000481154 GNPATO15228 680 aa12.12□□□□□ -0.47
PTPN12-211ENST00000481154 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
PTPN12-211ENST00000481154 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
PTPN12-211ENST00000481154 DNAJB2P25686 324 aa12.09□□□□□ -0.47
PTPN12-211ENST00000481154 RCCD1A6NED2 376 aa12.08□□□□□ -0.48
PTPN12-211ENST00000481154 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
PTPN12-211ENST00000481154 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
PTPN12-211ENST00000481154 TMEM134Q9H6X4 195 aa12.06□□□□□ -0.48
PTPN12-211ENST00000481154 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
PTPN12-211ENST00000481154 METTL3Q86U44 580 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms