RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 CARMIL1Q5VZK9 1371 aa9.62□□□□□ -0.87
LINC02040-201ENST00000481004 TMC2Q8TDI7 906 aa9.61□□□□□ -0.87
LINC02040-201ENST00000481004 SNPHO15079 494 aa9.59□□□□□ -0.87
LINC02040-201ENST00000481004 IQGAP2Q13576 1575 aa9.58□□□□□ -0.88
LINC02040-201ENST00000481004 DISP1Q96F81 1524 aa9.56□□□□□ -0.88
LINC02040-201ENST00000481004 TMEM92Q6UXU6 159 aa9.56□□□□□ -0.88
LINC02040-201ENST00000481004 RAPGEF2Q9Y4G8 1499 aa9.55□□□□□ -0.88
LINC02040-201ENST00000481004 CTTNBP2Q8WZ74 1663 aa9.55□□□□□ -0.88
LINC02040-201ENST00000481004 C2orf72A6NCS6 295 aa9.54□□□□□ -0.88
LINC02040-201ENST00000481004 MAPKBP1O60336 1514 aa9.54□□□□□ -0.88
LINC02040-201ENST00000481004 UGGT2Q9NYU1 1516 aa9.53□□□□□ -0.88
LINC02040-201ENST00000481004 DIP2BQ9P265 1576 aa9.53□□□□□ -0.88
LINC02040-201ENST00000481004 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
LINC02040-201ENST00000481004 KIF3CO14782 793 aa9.52□□□□□ -0.89
LINC02040-201ENST00000481004 PDE4AP27815 886 aa9.52□□□□□ -0.89
LINC02040-201ENST00000481004 KIAA0556O60303 1618 aa9.52□□□□□ -0.89
LINC02040-201ENST00000481004 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
LINC02040-201ENST00000481004 FAM163AQ96GL9 167 aaPredicted RBP9.51□□□□□ -0.89
LINC02040-201ENST00000481004 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
LINC02040-201ENST00000481004 RIMBP2O15034 1052 aa9.5□□□□□ -0.89
LINC02040-201ENST00000481004 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
LINC02040-201ENST00000481004 ABCC10Q5T3U5 1492 aa9.5□□□□□ -0.89
LINC02040-201ENST00000481004 PTPRGP23470 1445 aa9.49□□□□□ -0.89
LINC02040-201ENST00000481004 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
LINC02040-201ENST00000481004 ABCC2Q92887 1545 aa9.49□□□□□ -0.89
LINC02040-201ENST00000481004 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
LINC02040-201ENST00000481004 ZNF710Q8N1W2 664 aa9.48□□□□□ -0.89
LINC02040-201ENST00000481004 TTBK1Q5TCY1 1321 aaPredicted RBP9.48□□□□□ -0.89
LINC02040-201ENST00000481004 FOXK1P85037 733 aa9.47□□□□□ -0.89
LINC02040-201ENST00000481004 PPRC1Q5VV67 1664 aaKnown RBP9.47□□□□□ -0.89
LINC02040-201ENST00000481004 CARMIL2Q6F5E8 1435 aa9.47□□□□□ -0.89
LINC02040-201ENST00000481004 UHRF1BP1LA0JNW5 1464 aa9.47□□□□□ -0.89
LINC02040-201ENST00000481004 ZCCHC11Q5TAX3 1644 aaKnown RBP9.46□□□□□ -0.89
LINC02040-201ENST00000481004 LARP6Q9BRS8 491 aaKnown RBP9.46□□□□□ -0.9
LINC02040-201ENST00000481004 NCKAP5LQ9HCH0 1330 aa9.46□□□□□ -0.9
LINC02040-201ENST00000481004 TSPOAP1O95153 1857 aa9.46□□□□□ -0.9
LINC02040-201ENST00000481004 DSG2Q14126 1118 aa9.45□□□□□ -0.9
LINC02040-201ENST00000481004 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
LINC02040-201ENST00000481004 PLPP6Q8IY26 295 aa9.45□□□□□ -0.9
LINC02040-201ENST00000481004 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
LINC02040-201ENST00000481004 UACAQ9BZF9 1416 aa9.45□□□□□ -0.9
LINC02040-201ENST00000481004 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
LINC02040-201ENST00000481004 FAM69CQ0P6D2 419 aa9.44□□□□□ -0.9
LINC02040-201ENST00000481004 PPP1R15BQ5SWA1 713 aa9.44□□□□□ -0.9
LINC02040-201ENST00000481004 PLB1Q6P1J6 1458 aa9.44□□□□□ -0.9
LINC02040-201ENST00000481004 KDM5BQ9UGL1 1544 aa9.44□□□□□ -0.9
LINC02040-201ENST00000481004 ABCA8O94911 1581 aa9.43□□□□□ -0.9
LINC02040-201ENST00000481004 ASXL2Q76L83 1435 aa9.43□□□□□ -0.9
LINC02040-201ENST00000481004 SAMD9Q5K651 1589 aa9.42□□□□□ -0.9
LINC02040-201ENST00000481004 ST18O60284 1047 aa9.42□□□□□ -0.9
LINC02040-201ENST00000481004 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
LINC02040-201ENST00000481004 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
LINC02040-201ENST00000481004 GLI2P10070 1586 aa9.41□□□□□ -0.9
LINC02040-201ENST00000481004 MFSD10Q14728 455 aa9.41□□□□□ -0.9
LINC02040-201ENST00000481004 TSHZ2Q9NRE2 1034 aa9.41□□□□□ -0.9
LINC02040-201ENST00000481004 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
LINC02040-201ENST00000481004 MAP3K4Q9Y6R4 1608 aa9.41□□□□□ -0.9
LINC02040-201ENST00000481004 SLC34A2O95436 690 aa9.4□□□□□ -0.9
LINC02040-201ENST00000481004 HAP1P54257 671 aaPredicted RBP9.39□□□□□ -0.91
LINC02040-201ENST00000481004 EPRSP07814 1512 aaKnown RBP9.39□□□□□ -0.91
LINC02040-201ENST00000481004 KDM6BO15054 1643 aa9.38□□□□□ -0.91
LINC02040-201ENST00000481004 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
LINC02040-201ENST00000481004 KIF21BO75037 1637 aa9.38□□□□□ -0.91
LINC02040-201ENST00000481004 TBC1D12O60347 775 aa9.37□□□□□ -0.91
LINC02040-201ENST00000481004 COL17A1Q9UMD9 1497 aaPredicted RBP9.36□□□□□ -0.91
LINC02040-201ENST00000481004 HOXB1P14653 301 aaPredicted RBP9.36□□□□□ -0.91
LINC02040-201ENST00000481004 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
LINC02040-201ENST00000481004 EEA1Q15075 1411 aa9.36□□□□□ -0.91
LINC02040-201ENST00000481004 WDR7Q9Y4E6 1490 aa9.35□□□□□ -0.91
LINC02040-201ENST00000481004 EMP3P54852 163 aa9.35□□□□□ -0.91
LINC02040-201ENST00000481004 P3H3Q8IVL6 736 aa9.35□□□□□ -0.91
LINC02040-201ENST00000481004 ARSIQ5FYB1 569 aa9.34□□□□□ -0.91
LINC02040-201ENST00000481004 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
LINC02040-201ENST00000481004 PCDHGA4Q9Y5G9 962 aa9.34□□□□□ -0.91
LINC02040-201ENST00000481004 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
LINC02040-201ENST00000481004 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC02040-201ENST00000481004 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
LINC02040-201ENST00000481004 ATP10BO94823 1461 aa9.33□□□□□ -0.92
LINC02040-201ENST00000481004 MARVELD3Q96A59 401 aa9.32□□□□□ -0.92
LINC02040-201ENST00000481004 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
LINC02040-201ENST00000481004 ZNF316A6NFI3 1004 aaPredicted RBP9.31□□□□□ -0.92
LINC02040-201ENST00000481004 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
LINC02040-201ENST00000481004 NUP153P49790 1475 aaKnown RBP9.31□□□□□ -0.92
LINC02040-201ENST00000481004 CFAP43Q8NDM7 1665 aa9.31□□□□□ -0.92
LINC02040-201ENST00000481004 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
LINC02040-201ENST00000481004 RANGAP1P46060 587 aaPredicted RBP9.29□□□□□ -0.92
LINC02040-201ENST00000481004 MAP3K9P80192 1104 aa9.29□□□□□ -0.92
LINC02040-201ENST00000481004 CAMK2BQ13554 666 aa9.29□□□□□ -0.92
LINC02040-201ENST00000481004 E2F4Q16254 413 aa9.29□□□□□ -0.92
LINC02040-201ENST00000481004 NUDT7P0C024 238 aa9.28□□□□□ -0.92
LINC02040-201ENST00000481004 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
LINC02040-201ENST00000481004 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC02040-201ENST00000481004 ERBB3P21860 1342 aa9.28□□□□□ -0.92
LINC02040-201ENST00000481004 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.92
LINC02040-201ENST00000481004 EFCAB5A4FU69 1503 aa9.27□□□□□ -0.93
LINC02040-201ENST00000481004 MAGI3Q5TCQ9 1506 aa9.27□□□□□ -0.93
LINC02040-201ENST00000481004 LRRIQ1Q96JM4 1722 aa9.27□□□□□ -0.93
LINC02040-201ENST00000481004 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
LINC02040-201ENST00000481004 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
LINC02040-201ENST00000481004 ARHGAP35Q9NRY4 1499 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms