RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 STK31Q9BXU1 1019 aa17■□□□□ 0.31
MCF2L-225ENST00000480321 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-225ENST00000480321 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
MCF2L-225ENST00000480321 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
MCF2L-225ENST00000480321 CCDC9Q9Y3X0 531 aaKnown RBP16.98■□□□□ 0.31
MCF2L-225ENST00000480321 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-225ENST00000480321 ST18O60284 1047 aa16.98■□□□□ 0.31
MCF2L-225ENST00000480321 KIF3BO15066 747 aa16.97■□□□□ 0.31
MCF2L-225ENST00000480321 RSPH6AQ9H0K4 717 aa16.97■□□□□ 0.31
MCF2L-225ENST00000480321 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-225ENST00000480321 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
MCF2L-225ENST00000480321 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
MCF2L-225ENST00000480321 EID1Q9Y6B2 187 aa16.94■□□□□ 0.3
MCF2L-225ENST00000480321 WIZO95785 1651 aa16.94■□□□□ 0.3
MCF2L-225ENST00000480321 GORABQ5T7V8 394 aa16.94■□□□□ 0.3
MCF2L-225ENST00000480321 PDE4AP27815 886 aa16.93■□□□□ 0.3
MCF2L-225ENST00000480321 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
MCF2L-225ENST00000480321 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-225ENST00000480321 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
MCF2L-225ENST00000480321 E9PSI1 815 aa16.93■□□□□ 0.3
MCF2L-225ENST00000480321 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
MCF2L-225ENST00000480321 FHOD3Q2V2M9 1422 aa16.93■□□□□ 0.3
MCF2L-225ENST00000480321 CHMP4CQ96CF2 233 aa16.93■□□□□ 0.3
MCF2L-225ENST00000480321 KIF3AQ9Y496 699 aa16.93■□□□□ 0.3
MCF2L-225ENST00000480321 TNNT3P45378 269 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-225ENST00000480321 TAF7LQ5H9L4 462 aa16.91■□□□□ 0.3
MCF2L-225ENST00000480321 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
MCF2L-225ENST00000480321 GSE1Q14687 1217 aa16.9■□□□□ 0.3
MCF2L-225ENST00000480321 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-225ENST00000480321 HNRNPMP52272 730 aaKnown RBP eCLIP16.9■□□□□ 0.3
MCF2L-225ENST00000480321 CCDC144AA2RUR9 1427 aa16.9■□□□□ 0.3
MCF2L-225ENST00000480321 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
MCF2L-225ENST00000480321 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
MCF2L-225ENST00000480321 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
MCF2L-225ENST00000480321 AMPHP49418 695 aa16.87■□□□□ 0.29
MCF2L-225ENST00000480321 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
MCF2L-225ENST00000480321 AAMPQ13685 434 aa16.86■□□□□ 0.29
MCF2L-225ENST00000480321 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
MCF2L-225ENST00000480321 SLC4A10Q6U841 1118 aa16.85■□□□□ 0.29
MCF2L-225ENST00000480321 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
MCF2L-225ENST00000480321 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
MCF2L-225ENST00000480321 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
MCF2L-225ENST00000480321 PDE4CQ08493 712 aa16.85■□□□□ 0.29
MCF2L-225ENST00000480321 USP47Q96K76 1375 aa16.85■□□□□ 0.29
MCF2L-225ENST00000480321 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-225ENST00000480321 CLUAP1Q96AJ1 413 aa16.84■□□□□ 0.29
MCF2L-225ENST00000480321 G3V3G9 751 aa16.84■□□□□ 0.29
MCF2L-225ENST00000480321 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
MCF2L-225ENST00000480321 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
MCF2L-225ENST00000480321 PANK3Q9H999 370 aa16.83■□□□□ 0.29
MCF2L-225ENST00000480321 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
MCF2L-225ENST00000480321 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
MCF2L-225ENST00000480321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.28
MCF2L-225ENST00000480321 HSP90AA2PQ14568 343 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-225ENST00000480321 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
MCF2L-225ENST00000480321 NOC3LQ8WTT2 800 aaKnown RBP16.81■□□□□ 0.28
MCF2L-225ENST00000480321 CUX1P39880 1505 aa16.8■□□□□ 0.28
MCF2L-225ENST00000480321 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
MCF2L-225ENST00000480321 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
MCF2L-225ENST00000480321 CRBNQ96SW2 442 aa16.79■□□□□ 0.28
MCF2L-225ENST00000480321 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-225ENST00000480321 DDX19BQ9UMR2 479 aa16.79■□□□□ 0.28
MCF2L-225ENST00000480321 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
MCF2L-225ENST00000480321 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
MCF2L-225ENST00000480321 FRAT2O75474 233 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-225ENST00000480321 CHMP5Q9NZZ3 219 aa16.77■□□□□ 0.27
MCF2L-225ENST00000480321 ROCK1Q13464 1354 aa16.77■□□□□ 0.27
MCF2L-225ENST00000480321 REC8O95072 547 aa16.77■□□□□ 0.27
MCF2L-225ENST00000480321 EVC2Q86UK5 1308 aa16.76■□□□□ 0.27
MCF2L-225ENST00000480321 TPM3P06753 285 aa16.75■□□□□ 0.27
MCF2L-225ENST00000480321 RASSF8Q8NHQ8 419 aa16.75■□□□□ 0.27
MCF2L-225ENST00000480321 TOMM22Q9NS69 142 aa16.75■□□□□ 0.27
MCF2L-225ENST00000480321 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
MCF2L-225ENST00000480321 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
MCF2L-225ENST00000480321 ANKRD45Q5TZF3 282 aa16.74■□□□□ 0.27
MCF2L-225ENST00000480321 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
MCF2L-225ENST00000480321 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
MCF2L-225ENST00000480321 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
MCF2L-225ENST00000480321 NOL8Q76FK4 1167 aaKnown RBP16.73■□□□□ 0.27
MCF2L-225ENST00000480321 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
MCF2L-225ENST00000480321 JPH4Q96JJ6 628 aa16.73■□□□□ 0.27
MCF2L-225ENST00000480321 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
MCF2L-225ENST00000480321 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
MCF2L-225ENST00000480321 GOLGA6L19H0YKK7 550 aa16.72■□□□□ 0.27
MCF2L-225ENST00000480321 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
MCF2L-225ENST00000480321 VGFO15240 615 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-225ENST00000480321 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
MCF2L-225ENST00000480321 ANO8Q9HCE9 1232 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-225ENST00000480321 H3BQV1 296 aa16.71■□□□□ 0.27
MCF2L-225ENST00000480321 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
MCF2L-225ENST00000480321 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
MCF2L-225ENST00000480321 PLIN1O60240 522 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 NUCB2P80303 420 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
MCF2L-225ENST00000480321 COG3Q96JB2 828 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 COG6Q9Y2V7 657 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms