RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 PLEKHH2Q8IVE3 1493 aa23.51■■□□□ 1.35
PKD1-213ENST00000480227 UNC13BO14795 1591 aa23.51■■□□□ 1.35
PKD1-213ENST00000480227 CCDC144AA2RUR9 1427 aa23.49■■□□□ 1.35
PKD1-213ENST00000480227 ST20-MTHFSA0A0A6YYL1 179 aa23.49■■□□□ 1.35
PKD1-213ENST00000480227 PLXNC1O60486 1568 aa23.49■■□□□ 1.35
PKD1-213ENST00000480227 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
PKD1-213ENST00000480227 PLA2R1Q13018 1463 aa23.47■■□□□ 1.35
PKD1-213ENST00000480227 PLCH2O75038 1416 aa23.45■■□□□ 1.35
PKD1-213ENST00000480227 ROCK2O75116 1388 aaKnown RBP23.45■■□□□ 1.34
PKD1-213ENST00000480227 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.34
PKD1-213ENST00000480227 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
PKD1-213ENST00000480227 UHRF1BP1LA0JNW5 1464 aa23.42■■□□□ 1.34
PKD1-213ENST00000480227 DUOX2Q9NRD8 1548 aa23.42■■□□□ 1.34
PKD1-213ENST00000480227 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
PKD1-213ENST00000480227 PRAG1Q86YV5 1406 aa23.41■■□□□ 1.34
PKD1-213ENST00000480227 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
PKD1-213ENST00000480227 ZBED9Q6R2W3 1325 aa23.41■■□□□ 1.34
PKD1-213ENST00000480227 TRAPPC8Q9Y2L5 1435 aa23.4■■□□□ 1.34
PKD1-213ENST00000480227 ABCC1P33527 1531 aa23.39■■□□□ 1.34
PKD1-213ENST00000480227 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
PKD1-213ENST00000480227 A2MP01023 1474 aa23.38■■□□□ 1.33
PKD1-213ENST00000480227 ERBINQ96RT1 1412 aa23.36■■□□□ 1.33
PKD1-213ENST00000480227 MAGI2Q86UL8 1455 aa23.35■■□□□ 1.33
PKD1-213ENST00000480227 AFAP1Q8N556 730 aa23.33■■□□□ 1.32
PKD1-213ENST00000480227 SENP3-EIF4A1A0A087X0R7 540 aa23.32■■□□□ 1.32
PKD1-213ENST00000480227 E9PCH4 1651 aa23.31■■□□□ 1.32
PKD1-213ENST00000480227 SPAG9O60271 1321 aaKnown RBP23.29■■□□□ 1.32
PKD1-213ENST00000480227 MYT1Q01538 1121 aa23.29■■□□□ 1.32
PKD1-213ENST00000480227 RBM19Q9Y4C8 960 aaKnown RBP23.29■■□□□ 1.32
PKD1-213ENST00000480227 ATP10AO60312 1499 aa23.27■■□□□ 1.32
PKD1-213ENST00000480227 GPRASP1Q5JY77 1395 aa23.26■■□□□ 1.31
PKD1-213ENST00000480227 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
PKD1-213ENST00000480227 PNISRQ8TF01 805 aaKnown RBP23.26■■□□□ 1.31
PKD1-213ENST00000480227 ZFYVE16Q7Z3T8 1539 aa23.25■■□□□ 1.31
PKD1-213ENST00000480227 PRDM15P57071 1507 aaPredicted RBP23.24■■□□□ 1.31
PKD1-213ENST00000480227 WDR7Q9Y4E6 1490 aa23.24■■□□□ 1.31
PKD1-213ENST00000480227 PPP4R2Q9NY27 417 aa23.22■■□□□ 1.31
PKD1-213ENST00000480227 ARAP3Q8WWN8 1544 aa23.21■■□□□ 1.31
PKD1-213ENST00000480227 ERICH6BQ5W0A0 696 aa23.21■■□□□ 1.31
PKD1-213ENST00000480227 LAMC1P11047 1609 aa23.21■■□□□ 1.31
PKD1-213ENST00000480227 EIF2AK4Q9P2K8 1649 aaKnown RBP23.21■■□□□ 1.31
PKD1-213ENST00000480227 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
PKD1-213ENST00000480227 TESK2Q96S53 571 aa23.2■■□□□ 1.3
PKD1-213ENST00000480227 MYBBP1AQ9BQG0 1328 aaKnown RBP23.2■■□□□ 1.3
PKD1-213ENST00000480227 RTEL1-TNFRSF6BF6WH68 1400 aa23.2■■□□□ 1.3
PKD1-213ENST00000480227 FANCAO15360 1455 aa23.19■■□□□ 1.3
PKD1-213ENST00000480227 COL17A1Q9UMD9 1497 aaPredicted RBP23.18■■□□□ 1.3
PKD1-213ENST00000480227 RALBP1Q15311 655 aa23.18■■□□□ 1.3
PKD1-213ENST00000480227 ABCA9Q8IUA7 1624 aa23.17■■□□□ 1.3
PKD1-213ENST00000480227 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
PKD1-213ENST00000480227 BRD4O60885 1362 aaPredicted RBP23.16■■□□□ 1.3
PKD1-213ENST00000480227 MYT1LQ9UL68 1186 aa23.15■■□□□ 1.3
PKD1-213ENST00000480227 ATP7AQ04656 1500 aa23.15■■□□□ 1.3
PKD1-213ENST00000480227 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
PKD1-213ENST00000480227 B4GALNT3Q6L9W6 998 aa23.15■■□□□ 1.3
PKD1-213ENST00000480227 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.3
PKD1-213ENST00000480227 KTN1Q86UP2 1357 aaKnown RBP23.14■■□□□ 1.3
PKD1-213ENST00000480227 DEPDC5O75140 1603 aa23.14■■□□□ 1.3
PKD1-213ENST00000480227 RNF17Q9BXT8 1623 aaKnown RBP23.14■■□□□ 1.3
PKD1-213ENST00000480227 INO80Q9ULG1 1556 aaPredicted RBP23.13■■□□□ 1.29
PKD1-213ENST00000480227 NUDCQ9Y266 331 aa23.13■■□□□ 1.29
PKD1-213ENST00000480227 TRPM2O94759 1503 aa23.13■■□□□ 1.29
PKD1-213ENST00000480227 LRPPRCP42704 1394 aaKnown RBP23.13■■□□□ 1.29
PKD1-213ENST00000480227 SCAPERQ9BY12 1400 aa23.12■■□□□ 1.29
PKD1-213ENST00000480227 ADGRL1O94910 1474 aa23.12■■□□□ 1.29
PKD1-213ENST00000480227 PARD3Q8TEW0 1356 aa23.12■■□□□ 1.29
PKD1-213ENST00000480227 CEP152O94986 1710 aa23.12■■□□□ 1.29
PKD1-213ENST00000480227 CLTCL1P53675 1640 aa23.12■■□□□ 1.29
PKD1-213ENST00000480227 MADDQ8WXG6 1647 aa23.11■■□□□ 1.29
PKD1-213ENST00000480227 KIF3BO15066 747 aa23.11■■□□□ 1.29
PKD1-213ENST00000480227 ASXL2Q76L83 1435 aa23.1■■□□□ 1.29
PKD1-213ENST00000480227 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
PKD1-213ENST00000480227 TET3O43151 1660 aa23.09■■□□□ 1.29
PKD1-213ENST00000480227 TMF1P82094 1093 aa23.09■■□□□ 1.29
PKD1-213ENST00000480227 PANK3Q9H999 370 aa23.09■■□□□ 1.29
PKD1-213ENST00000480227 PTPRTO14522 1441 aa23.08■■□□□ 1.29
PKD1-213ENST00000480227 NLRP13Q86W25 1043 aa23.08■■□□□ 1.29
PKD1-213ENST00000480227 ANP32EQ9BTT0 268 aa23.06■■□□□ 1.28
PKD1-213ENST00000480227 KANK1Q14678 1352 aa23.05■■□□□ 1.28
PKD1-213ENST00000480227 IQGAP1P46940 1657 aa23.04■■□□□ 1.28
PKD1-213ENST00000480227 VWDEQ8N2E2 1590 aa23.04■■□□□ 1.28
PKD1-213ENST00000480227 SALL2Q9Y467 1007 aaPredicted RBP23.03■■□□□ 1.28
PKD1-213ENST00000480227 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.28
PKD1-213ENST00000480227 UGGT1Q9NYU2 1555 aa23.02■■□□□ 1.27
PKD1-213ENST00000480227 KIDINS220Q9ULH0 1771 aa23■■□□□ 1.27
PKD1-213ENST00000480227 RNF123Q5XPI4 1314 aa22.99■■□□□ 1.27
PKD1-213ENST00000480227 WASHC2CQ9Y4E1 1318 aa22.98■■□□□ 1.27
PKD1-213ENST00000480227 SCAF11Q99590 1463 aaKnown RBP22.96■■□□□ 1.27
PKD1-213ENST00000480227 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
PKD1-213ENST00000480227 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
PKD1-213ENST00000480227 PPRC1Q5VV67 1664 aaKnown RBP22.92■■□□□ 1.26
PKD1-213ENST00000480227 KIF1BO60333 1816 aa22.92■■□□□ 1.26
PKD1-213ENST00000480227 NPM1P06748 294 aaKnown RBP eCLIP22.92■■□□□ 1.26
PKD1-213ENST00000480227 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
PKD1-213ENST00000480227 ZNF518AQ6AHZ1 1483 aa22.91■■□□□ 1.26
PKD1-213ENST00000480227 MSH5O43196 834 aa22.91■■□□□ 1.26
PKD1-213ENST00000480227 STAC3Q96MF2 364 aa22.91■■□□□ 1.26
PKD1-213ENST00000480227 CCDC136Q96JN2 1154 aa22.91■■□□□ 1.26
PKD1-213ENST00000480227 CFAP70Q5T0N1 1121 aa22.9■■□□□ 1.26
PKD1-213ENST00000480227 ADGRF5Q8IZF2 1346 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms