RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 ZBED9Q6R2W3 1325 aa23.7■■□□□ 1.38
TNXB-204ENST00000479795 RSPH4AQ5TD94 716 aa23.68■■□□□ 1.38
TNXB-204ENST00000479795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.68■■□□□ 1.38
TNXB-204ENST00000479795 ARHGEF12Q9NZN5 1544 aa23.66■■□□□ 1.38
TNXB-204ENST00000479795 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
TNXB-204ENST00000479795 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
TNXB-204ENST00000479795 ARID4BQ4LE39 1312 aaPredicted RBP23.62■■□□□ 1.37
TNXB-204ENST00000479795 NBPF1Q3BBV0 1214 aa23.62■■□□□ 1.37
TNXB-204ENST00000479795 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
TNXB-204ENST00000479795 PLEKHH2Q8IVE3 1493 aa23.61■■□□□ 1.37
TNXB-204ENST00000479795 ABCC2Q92887 1545 aa23.6■■□□□ 1.37
TNXB-204ENST00000479795 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
TNXB-204ENST00000479795 PLA2R1Q13018 1463 aa23.58■■□□□ 1.36
TNXB-204ENST00000479795 MYO5CQ9NQX4 1742 aa23.55■■□□□ 1.36
TNXB-204ENST00000479795 PRAG1Q86YV5 1406 aa23.54■■□□□ 1.36
TNXB-204ENST00000479795 PNISRQ8TF01 805 aaKnown RBP23.53■■□□□ 1.36
TNXB-204ENST00000479795 B4GALNT3Q6L9W6 998 aa23.53■■□□□ 1.36
TNXB-204ENST00000479795 PPP4R2Q9NY27 417 aa23.53■■□□□ 1.36
TNXB-204ENST00000479795 EFCAB2Q5VUJ9 269 aa23.51■■□□□ 1.35
TNXB-204ENST00000479795 MAST1Q9Y2H9 1570 aa23.51■■□□□ 1.35
TNXB-204ENST00000479795 UNC13BO14795 1591 aa23.5■■□□□ 1.35
TNXB-204ENST00000479795 A2MP01023 1474 aa23.5■■□□□ 1.35
TNXB-204ENST00000479795 PLCH2O75038 1416 aa23.48■■□□□ 1.35
TNXB-204ENST00000479795 TRPM1Q7Z4N2 1603 aa23.47■■□□□ 1.35
TNXB-204ENST00000479795 TRAPPC8Q9Y2L5 1435 aa23.47■■□□□ 1.35
TNXB-204ENST00000479795 ZCCHC11Q5TAX3 1644 aaKnown RBP23.47■■□□□ 1.35
TNXB-204ENST00000479795 ERICH6BQ5W0A0 696 aa23.46■■□□□ 1.35
TNXB-204ENST00000479795 AFAP1Q8N556 730 aa23.46■■□□□ 1.35
TNXB-204ENST00000479795 ERICH6Q7L0X2 663 aa23.46■■□□□ 1.35
TNXB-204ENST00000479795 PLXNC1O60486 1568 aa23.45■■□□□ 1.35
TNXB-204ENST00000479795 DUOX2Q9NRD8 1548 aa23.45■■□□□ 1.34
TNXB-204ENST00000479795 NUDCQ9Y266 331 aa23.45■■□□□ 1.34
TNXB-204ENST00000479795 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
TNXB-204ENST00000479795 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
TNXB-204ENST00000479795 SMG6Q86US8 1419 aaKnown RBP23.44■■□□□ 1.34
TNXB-204ENST00000479795 SALL2Q9Y467 1007 aaPredicted RBP23.43■■□□□ 1.34
TNXB-204ENST00000479795 FANCIQ9NVI1 1328 aa23.43■■□□□ 1.34
TNXB-204ENST00000479795 RALBP1Q15311 655 aa23.42■■□□□ 1.34
TNXB-204ENST00000479795 DISP3Q9P2K9 1392 aa23.4■■□□□ 1.34
TNXB-204ENST00000479795 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
TNXB-204ENST00000479795 TESK2Q96S53 571 aa23.39■■□□□ 1.34
TNXB-204ENST00000479795 ERBINQ96RT1 1412 aa23.39■■□□□ 1.34
TNXB-204ENST00000479795 CC2D1BQ5T0F9 858 aaKnown RBP23.39■■□□□ 1.33
TNXB-204ENST00000479795 BRD4O60885 1362 aaPredicted RBP23.38■■□□□ 1.33
TNXB-204ENST00000479795 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
TNXB-204ENST00000479795 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
TNXB-204ENST00000479795 E9PCH4 1651 aa23.37■■□□□ 1.33
TNXB-204ENST00000479795 ABCC1P33527 1531 aa23.37■■□□□ 1.33
TNXB-204ENST00000479795 GPRASP1Q5JY77 1395 aa23.37■■□□□ 1.33
TNXB-204ENST00000479795 DEKP35659 375 aaKnown RBP23.37■■□□□ 1.33
TNXB-204ENST00000479795 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
TNXB-204ENST00000479795 KTN1Q86UP2 1357 aaKnown RBP23.36■■□□□ 1.33
TNXB-204ENST00000479795 PANK3Q9H999 370 aa23.35■■□□□ 1.33
TNXB-204ENST00000479795 LRPPRCP42704 1394 aaKnown RBP23.35■■□□□ 1.33
TNXB-204ENST00000479795 ANO8Q9HCE9 1232 aaPredicted RBP23.34■■□□□ 1.33
TNXB-204ENST00000479795 MAGI2Q86UL8 1455 aa23.34■■□□□ 1.33
TNXB-204ENST00000479795 UHRF1BP1LA0JNW5 1464 aa23.33■■□□□ 1.33
TNXB-204ENST00000479795 NLRP13Q86W25 1043 aa23.33■■□□□ 1.33
TNXB-204ENST00000479795 PRDM15P57071 1507 aaPredicted RBP23.32■■□□□ 1.32
TNXB-204ENST00000479795 COL17A1Q9UMD9 1497 aaPredicted RBP23.32■■□□□ 1.32
TNXB-204ENST00000479795 PARD3Q8TEW0 1356 aa23.31■■□□□ 1.32
TNXB-204ENST00000479795 ATP10AO60312 1499 aa23.31■■□□□ 1.32
TNXB-204ENST00000479795 TMF1P82094 1093 aa23.31■■□□□ 1.32
TNXB-204ENST00000479795 RNF123Q5XPI4 1314 aa23.26■■□□□ 1.31
TNXB-204ENST00000479795 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
TNXB-204ENST00000479795 KIF3BO15066 747 aa23.25■■□□□ 1.31
TNXB-204ENST00000479795 CCDC136Q96JN2 1154 aa23.24■■□□□ 1.31
TNXB-204ENST00000479795 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
TNXB-204ENST00000479795 LAMC1P11047 1609 aa23.23■■□□□ 1.31
TNXB-204ENST00000479795 FANCAO15360 1455 aa23.22■■□□□ 1.31
TNXB-204ENST00000479795 SCAPERQ9BY12 1400 aa23.21■■□□□ 1.31
TNXB-204ENST00000479795 WDR7Q9Y4E6 1490 aa23.21■■□□□ 1.31
TNXB-204ENST00000479795 RTEL1-TNFRSF6BF6WH68 1400 aa23.21■■□□□ 1.31
TNXB-204ENST00000479795 CDCA7LQ96GN5 454 aa23.2■■□□□ 1.3
TNXB-204ENST00000479795 CLTCL1P53675 1640 aa23.16■■□□□ 1.3
TNXB-204ENST00000479795 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
TNXB-204ENST00000479795 WASHC2CQ9Y4E1 1318 aa23.16■■□□□ 1.3
TNXB-204ENST00000479795 TRPM2O94759 1503 aa23.16■■□□□ 1.3
TNXB-204ENST00000479795 ATP7AQ04656 1500 aa23.15■■□□□ 1.3
TNXB-204ENST00000479795 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
TNXB-204ENST00000479795 RCAN3Q9UKA8 241 aa23.15■■□□□ 1.3
TNXB-204ENST00000479795 ADGRL1O94910 1474 aa23.15■■□□□ 1.3
TNXB-204ENST00000479795 KANK1Q14678 1352 aa23.15■■□□□ 1.3
TNXB-204ENST00000479795 RRP1P56182 461 aaKnown RBP23.14■■□□□ 1.29
TNXB-204ENST00000479795 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.29
TNXB-204ENST00000479795 PTPRTO14522 1441 aa23.13■■□□□ 1.29
TNXB-204ENST00000479795 KNSTRNQ9Y448 316 aa23.13■■□□□ 1.29
TNXB-204ENST00000479795 ARAP3Q8WWN8 1544 aa23.13■■□□□ 1.29
TNXB-204ENST00000479795 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
TNXB-204ENST00000479795 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
TNXB-204ENST00000479795 UGGT1Q9NYU2 1555 aa23.11■■□□□ 1.29
TNXB-204ENST00000479795 CFAP70Q5T0N1 1121 aa23.1■■□□□ 1.29
TNXB-204ENST00000479795 ASXL2Q76L83 1435 aa23.1■■□□□ 1.29
TNXB-204ENST00000479795 ABCA9Q8IUA7 1624 aa23.1■■□□□ 1.29
TNXB-204ENST00000479795 CEP152O94986 1710 aa23.09■■□□□ 1.29
TNXB-204ENST00000479795 ADAMTS8Q9UP79 889 aa23.09■■□□□ 1.29
TNXB-204ENST00000479795 DEPDC5O75140 1603 aa23.09■■□□□ 1.29
TNXB-204ENST00000479795 INO80Q9ULG1 1556 aaPredicted RBP23.08■■□□□ 1.29
TNXB-204ENST00000479795 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.29
TNXB-204ENST00000479795 TET3O43151 1660 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms