RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
CLOCK-204ENST00000479384 WNT2BQ93097 391 aa10.21□□□□□ -0.77
CLOCK-204ENST00000479384 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
CLOCK-204ENST00000479384 EPAS1Q99814 870 aa10.19□□□□□ -0.78
CLOCK-204ENST00000479384 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
CLOCK-204ENST00000479384 RABGEF1Q9UJ41 708 aa10.18□□□□□ -0.78
CLOCK-204ENST00000479384 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.17□□□□□ -0.78
CLOCK-204ENST00000479384 C6orf132Q5T0Z8 1188 aa10.16□□□□□ -0.78
CLOCK-204ENST00000479384 DDX12PQ92771 950 aa10.16□□□□□ -0.78
CLOCK-204ENST00000479384 PDIA6Q15084 440 aa10.13□□□□□ -0.79
CLOCK-204ENST00000479384 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
CLOCK-204ENST00000479384 PAXIP1Q6ZW49 1069 aaPredicted RBP10.12□□□□□ -0.79
CLOCK-204ENST00000479384 CFAP44Q96MT7 982 aa10.12□□□□□ -0.79
CLOCK-204ENST00000479384 KIAA1468Q9P260 1216 aa10.12□□□□□ -0.79
CLOCK-204ENST00000479384 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
CLOCK-204ENST00000479384 EN1Q05925 392 aaPredicted RBP10.1□□□□□ -0.79
CLOCK-204ENST00000479384 NBR1Q14596 966 aa10.1□□□□□ -0.79
CLOCK-204ENST00000479384 LAPTM4BQ86VI4 370 aa10.1□□□□□ -0.79
CLOCK-204ENST00000479384 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
CLOCK-204ENST00000479384 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
CLOCK-204ENST00000479384 E2F4Q16254 413 aa10.09□□□□□ -0.79
CLOCK-204ENST00000479384 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
CLOCK-204ENST00000479384 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
CLOCK-204ENST00000479384 BCAMP50895 628 aa10.08□□□□□ -0.8
CLOCK-204ENST00000479384 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
CLOCK-204ENST00000479384 TSR1Q2NL82 804 aaKnown RBP10.07□□□□□ -0.8
CLOCK-204ENST00000479384 ZFRQ96KR1 1074 aaKnown RBP10.07□□□□□ -0.8
CLOCK-204ENST00000479384 SOWAHBA6NEL2 793 aa10.06□□□□□ -0.8
CLOCK-204ENST00000479384 MAP3K7O43318 606 aa10.06□□□□□ -0.8
CLOCK-204ENST00000479384 ARIH1Q9Y4X5 557 aaPredicted RBP10.06□□□□□ -0.8
CLOCK-204ENST00000479384 WDR70Q9NW82 654 aa10.04□□□□□ -0.8
CLOCK-204ENST00000479384 PRIM1P49642 420 aaKnown RBP10.03□□□□□ -0.8
CLOCK-204ENST00000479384 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
CLOCK-204ENST00000479384 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
CLOCK-204ENST00000479384 A0A0G2JS52 829 aa10.02□□□□□ -0.81
CLOCK-204ENST00000479384 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
CLOCK-204ENST00000479384 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
CLOCK-204ENST00000479384 WBP1LQ9NX94 342 aa10□□□□□ -0.81
CLOCK-204ENST00000479384 RGS20O76081 388 aa9.98□□□□□ -0.81
CLOCK-204ENST00000479384 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
CLOCK-204ENST00000479384 PACS2Q86VP3 889 aa9.98□□□□□ -0.81
CLOCK-204ENST00000479384 CDCA7LQ96GN5 454 aa9.97□□□□□ -0.81
CLOCK-204ENST00000479384 LRCH3Q96II8 777 aa9.97□□□□□ -0.81
CLOCK-204ENST00000479384 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.97□□□□□ -0.81
CLOCK-204ENST00000479384 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
CLOCK-204ENST00000479384 PRSS12P56730 875 aa9.96□□□□□ -0.82
CLOCK-204ENST00000479384 OSBPP22059 807 aa9.95□□□□□ -0.82
CLOCK-204ENST00000479384 CERKQ8TCT0 537 aa9.95□□□□□ -0.82
CLOCK-204ENST00000479384 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
CLOCK-204ENST00000479384 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
CLOCK-204ENST00000479384 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
CLOCK-204ENST00000479384 SMAPO00193 183 aa9.94□□□□□ -0.82
CLOCK-204ENST00000479384 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
CLOCK-204ENST00000479384 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
CLOCK-204ENST00000479384 SAMD7Q7Z3H4 446 aa9.9□□□□□ -0.82
CLOCK-204ENST00000479384 TATDN2Q93075 761 aa9.9□□□□□ -0.82
CLOCK-204ENST00000479384 PNMA3Q9UL41 463 aa9.9□□□□□ -0.82
CLOCK-204ENST00000479384 KCNC4Q03721 635 aa9.89□□□□□ -0.83
CLOCK-204ENST00000479384 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
CLOCK-204ENST00000479384 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
CLOCK-204ENST00000479384 PPP4CP60510 307 aa9.87□□□□□ -0.83
CLOCK-204ENST00000479384 NUDT18Q6ZVK8 323 aa9.86□□□□□ -0.83
CLOCK-204ENST00000479384 NPDC1Q9NQX5 325 aaPredicted RBP9.86□□□□□ -0.83
CLOCK-204ENST00000479384 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
CLOCK-204ENST00000479384 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
CLOCK-204ENST00000479384 TTC13Q8NBP0 860 aa9.83□□□□□ -0.84
CLOCK-204ENST00000479384 KCNV2Q8TDN2 545 aa9.83□□□□□ -0.84
CLOCK-204ENST00000479384 ARHGEF1Q92888 912 aaKnown RBP9.83□□□□□ -0.84
CLOCK-204ENST00000479384 MLLT3P42568 568 aaPredicted RBP9.82□□□□□ -0.84
CLOCK-204ENST00000479384 RNF40O75150 1001 aa9.8□□□□□ -0.84
CLOCK-204ENST00000479384 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
CLOCK-204ENST00000479384 HDGFP51858 240 aaKnown RBP9.78□□□□□ -0.84
CLOCK-204ENST00000479384 MTRQ99707 1265 aa9.78□□□□□ -0.84
CLOCK-204ENST00000479384 SWT1Q5T5J6 900 aaKnown RBP9.77□□□□□ -0.85
CLOCK-204ENST00000479384 APLP1P51693 650 aa9.76□□□□□ -0.85
CLOCK-204ENST00000479384 EYA1Q99502 592 aa9.75□□□□□ -0.85
CLOCK-204ENST00000479384 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
CLOCK-204ENST00000479384 PTGDRQ13258 359 aa9.73□□□□□ -0.85
CLOCK-204ENST00000479384 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
CLOCK-204ENST00000479384 ZNF516Q92618 1163 aa9.72□□□□□ -0.85
CLOCK-204ENST00000479384 NECTIN2Q92692 538 aa9.71□□□□□ -0.86
CLOCK-204ENST00000479384 P3H3Q8IVL6 736 aa9.7□□□□□ -0.86
CLOCK-204ENST00000479384 PPP1R18Q6NYC8 613 aa9.69□□□□□ -0.86
CLOCK-204ENST00000479384 SLC4A3P48751 1232 aa9.67□□□□□ -0.86
CLOCK-204ENST00000479384 COPS2P61201 443 aa9.67□□□□□ -0.86
CLOCK-204ENST00000479384 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
CLOCK-204ENST00000479384 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
CLOCK-204ENST00000479384 SEMA3EO15041 775 aa9.66□□□□□ -0.86
CLOCK-204ENST00000479384 DNAJB2P25686 324 aa9.66□□□□□ -0.86
CLOCK-204ENST00000479384 ADGRG1Q9Y653 693 aa9.66□□□□□ -0.86
CLOCK-204ENST00000479384 Q6ZNB5 142 aa9.65□□□□□ -0.86
CLOCK-204ENST00000479384 PRKD2Q9BZL6 878 aa9.65□□□□□ -0.86
CLOCK-204ENST00000479384 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
CLOCK-204ENST00000479384 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
CLOCK-204ENST00000479384 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
CLOCK-204ENST00000479384 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
CLOCK-204ENST00000479384 ZPR1O75312 459 aa9.62□□□□□ -0.87
CLOCK-204ENST00000479384 PRR14Q9BWN1 585 aa9.62□□□□□ -0.87
CLOCK-204ENST00000479384 RCCD1A6NED2 376 aa9.61□□□□□ -0.87
CLOCK-204ENST00000479384 FCHSD2O94868 740 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms