RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ZNF710Q8N1W2 664 aa10.53□□□□□ -0.72
RFC4-212ENST00000479307 MAP3K7O43318 606 aa10.52□□□□□ -0.73
RFC4-212ENST00000479307 FOSBP53539 338 aa10.51□□□□□ -0.73
RFC4-212ENST00000479307 GPR153Q6NV75 609 aa10.51□□□□□ -0.73
RFC4-212ENST00000479307 NUDT7P0C024 238 aa10.5□□□□□ -0.73
RFC4-212ENST00000479307 ARSIQ5FYB1 569 aa10.5□□□□□ -0.73
RFC4-212ENST00000479307 TRIM66O15016 1216 aa10.49□□□□□ -0.73
RFC4-212ENST00000479307 IRF6O14896 467 aa10.48□□□□□ -0.73
RFC4-212ENST00000479307 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
RFC4-212ENST00000479307 DAXXQ9UER7 740 aaPredicted RBP10.48□□□□□ -0.73
RFC4-212ENST00000479307 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
RFC4-212ENST00000479307 EMP3P54852 163 aa10.47□□□□□ -0.73
RFC4-212ENST00000479307 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
RFC4-212ENST00000479307 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
RFC4-212ENST00000479307 CCDC102AQ96A19 550 aa10.47□□□□□ -0.73
RFC4-212ENST00000479307 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.73
RFC4-212ENST00000479307 CDHR5Q9HBB8 845 aa10.46□□□□□ -0.73
RFC4-212ENST00000479307 PDE4DQ08499 809 aa10.45□□□□□ -0.74
RFC4-212ENST00000479307 KHSRPQ92945 711 aaKnown RBP eCLIP10.45□□□□□ -0.744e-6■■■■□ 20.1
RFC4-212ENST00000479307 NPDC1Q9NQX5 325 aaPredicted RBP10.45□□□□□ -0.74
RFC4-212ENST00000479307 FECHP22830 423 aa10.44□□□□□ -0.74
RFC4-212ENST00000479307 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
RFC4-212ENST00000479307 AMHR2Q16671 573 aa10.43□□□□□ -0.74
RFC4-212ENST00000479307 C6orf132Q5T0Z8 1188 aa10.43□□□□□ -0.74
RFC4-212ENST00000479307 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
RFC4-212ENST00000479307 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
RFC4-212ENST00000479307 PPP4R3BQ5MIZ7 849 aa10.41□□□□□ -0.74
RFC4-212ENST00000479307 RBM27Q9P2N5 1060 aaKnown RBP10.41□□□□□ -0.74
RFC4-212ENST00000479307 LHX6Q9UPM6 363 aa10.41□□□□□ -0.74
RFC4-212ENST00000479307 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
RFC4-212ENST00000479307 KDM4CQ9H3R0 1056 aa10.4□□□□□ -0.74
RFC4-212ENST00000479307 POTEB3A0JP26 581 aa10.39□□□□□ -0.75
RFC4-212ENST00000479307 POTEBQ6S5H4 581 aa10.39□□□□□ -0.75
RFC4-212ENST00000479307 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
RFC4-212ENST00000479307 GPBP1L1Q9HC44 474 aaPredicted RBP10.38□□□□□ -0.75
RFC4-212ENST00000479307 BCL2L12Q9HB09 334 aa10.37□□□□□ -0.75
RFC4-212ENST00000479307 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
RFC4-212ENST00000479307 KRTAP3-2Q9BYR7 98 aa10.35□□□□□ -0.75
RFC4-212ENST00000479307 GTF3C3Q9Y5Q9 886 aa10.35□□□□□ -0.75
RFC4-212ENST00000479307 OATP04181 439 aa10.34□□□□□ -0.75
RFC4-212ENST00000479307 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
RFC4-212ENST00000479307 PTPREP23469 700 aa10.33□□□□□ -0.76
RFC4-212ENST00000479307 TTLL12Q14166 644 aaPredicted RBP10.33□□□□□ -0.76
RFC4-212ENST00000479307 PADI6Q6TGC4 694 aa10.33□□□□□ -0.76
RFC4-212ENST00000479307 TTC13Q8NBP0 860 aa10.33□□□□□ -0.76
RFC4-212ENST00000479307 PRSS12P56730 875 aa10.32□□□□□ -0.76
RFC4-212ENST00000479307 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
RFC4-212ENST00000479307 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
RFC4-212ENST00000479307 CLCN1P35523 988 aa10.3□□□□□ -0.76
RFC4-212ENST00000479307 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
RFC4-212ENST00000479307 ADGRG1Q9Y653 693 aa10.3□□□□□ -0.76
RFC4-212ENST00000479307 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
RFC4-212ENST00000479307 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
RFC4-212ENST00000479307 ERICH6Q7L0X2 663 aa10.28□□□□□ -0.76
RFC4-212ENST00000479307 IL27Q8NEV9 243 aa10.28□□□□□ -0.76
RFC4-212ENST00000479307 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
RFC4-212ENST00000479307 GIGYF2Q6Y7W6 1299 aaKnown RBP10.27□□□□□ -0.77
RFC4-212ENST00000479307 RBM46Q8TBY0 533 aaKnown RBP10.27□□□□□ -0.77
RFC4-212ENST00000479307 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
RFC4-212ENST00000479307 COL9A1P20849 921 aa10.26□□□□□ -0.77
RFC4-212ENST00000479307 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
RFC4-212ENST00000479307 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
RFC4-212ENST00000479307 PHOX2BQ99453 314 aa10.25□□□□□ -0.77
RFC4-212ENST00000479307 MDM2Q00987 491 aaPredicted RBP10.24□□□□□ -0.77
RFC4-212ENST00000479307 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
RFC4-212ENST00000479307 ERBB3P21860 1342 aa10.23□□□□□ -0.77
RFC4-212ENST00000479307 TRIM6-TRIM34B2RNG4 842 aa10.22□□□□□ -0.77
RFC4-212ENST00000479307 FAM161AQ3B820 660 aa10.22□□□□□ -0.77
RFC4-212ENST00000479307 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
RFC4-212ENST00000479307 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
RFC4-212ENST00000479307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.21□□□□□ -0.77
RFC4-212ENST00000479307 NBPF26B4DH59 902 aa10.21□□□□□ -0.77
RFC4-212ENST00000479307 PACS2Q86VP3 889 aa10.21□□□□□ -0.77
RFC4-212ENST00000479307 TSKSQ9UJT2 592 aa10.21□□□□□ -0.77
RFC4-212ENST00000479307 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
RFC4-212ENST00000479307 MS4A1P11836 297 aa10.2□□□□□ -0.78
RFC4-212ENST00000479307 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
RFC4-212ENST00000479307 VARS2Q5ST30 1063 aaKnown RBP10.19□□□□□ -0.78
RFC4-212ENST00000479307 EYA1Q99502 592 aa10.19□□□□□ -0.78
RFC4-212ENST00000479307 GOPCQ9HD26 462 aa10.19□□□□□ -0.78
RFC4-212ENST00000479307 FAM217BQ9NTX9 383 aaPredicted RBP10.19□□□□□ -0.78
RFC4-212ENST00000479307 ARHGAP33O14559 1287 aa10.18□□□□□ -0.78
RFC4-212ENST00000479307 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
RFC4-212ENST00000479307 PBX2P40425 430 aa10.18□□□□□ -0.78
RFC4-212ENST00000479307 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
RFC4-212ENST00000479307 TATDN2Q93075 761 aa10.17□□□□□ -0.78
RFC4-212ENST00000479307 RCCD1A6NED2 376 aa10.16□□□□□ -0.78
RFC4-212ENST00000479307 ZBED2Q9BTP6 218 aa10.16□□□□□ -0.78
RFC4-212ENST00000479307 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
RFC4-212ENST00000479307 PNMA3Q9UL41 463 aa10.16□□□□□ -0.78
RFC4-212ENST00000479307 DNAJB2P25686 324 aa10.15□□□□□ -0.78
RFC4-212ENST00000479307 PROX2Q3B8N5 592 aa10.14□□□□□ -0.79
RFC4-212ENST00000479307 NLRP7Q8WX94 980 aa10.14□□□□□ -0.79
RFC4-212ENST00000479307 PSEN2P49810 448 aa10.13□□□□□ -0.79
RFC4-212ENST00000479307 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
RFC4-212ENST00000479307 ZNF687Q8N1G0 1237 aa10.13□□□□□ -0.79
RFC4-212ENST00000479307 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
RFC4-212ENST00000479307 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
RFC4-212ENST00000479307 SH3D19Q5HYK7 790 aa10.12□□□□□ -0.79
RFC4-212ENST00000479307 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms