RNA–Protein interactions for RNA: ENST00000479187.5

LRRK2-206, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 8,306 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-206ENST00000479187 NBR1Q14596 966 aa5.72□□□□□ -1.49
LRRK2-206ENST00000479187 COG3Q96JB2 828 aa5.72□□□□□ -1.49
LRRK2-206ENST00000479187 WDR70Q9NW82 654 aa5.72□□□□□ -1.49
LRRK2-206ENST00000479187 GOLGA3Q08378 1498 aa5.72□□□□□ -1.49
LRRK2-206ENST00000479187 PPM1FP49593 454 aaPredicted RBP5.72□□□□□ -1.49
LRRK2-206ENST00000479187 EIF3AQ14152 1382 aaKnown RBP5.72□□□□□ -1.49
LRRK2-206ENST00000479187 MYCNP04198 464 aaPredicted RBP5.72□□□□□ -1.49
LRRK2-206ENST00000479187 GPATCH3Q96I76 525 aa5.72□□□□□ -1.49
LRRK2-206ENST00000479187 CEP162Q5TB80 1403 aa5.72□□□□□ -1.49
LRRK2-206ENST00000479187 RBM5P52756 815 aaKnown RBP eCLIP5.72□□□□□ -1.49
LRRK2-206ENST00000479187 BIN2Q9UBW5 565 aaPredicted RBP5.71□□□□□ -1.49
LRRK2-206ENST00000479187 DCAF11Q8TEB1 546 aa5.71□□□□□ -1.49
LRRK2-206ENST00000479187 PRDM11Q9NQV5 511 aa5.71□□□□□ -1.49
LRRK2-206ENST00000479187 TMOD2Q9NZR1 351 aa5.71□□□□□ -1.5
LRRK2-206ENST00000479187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.71□□□□□ -1.5
LRRK2-206ENST00000479187 NGEFQ8N5V2 710 aa5.71□□□□□ -1.5
LRRK2-206ENST00000479187 KIF6Q6ZMV9 814 aa5.71□□□□□ -1.5
LRRK2-206ENST00000479187 FAM9BQ8IZU0 186 aa5.71□□□□□ -1.5
LRRK2-206ENST00000479187 TMEM132AQ24JP5 1023 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 STK32BQ9NY57 414 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 DHX16O60231 1041 aaKnown RBP5.7□□□□□ -1.5
LRRK2-206ENST00000479187 NF2P35240 595 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 ANKRD30AQ9BXX3 1397 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 PAF1Q8N7H5 531 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 LMOD1P29536 600 aaPredicted RBP5.7□□□□□ -1.5
LRRK2-206ENST00000479187 KIAA2012Q0VF49 1180 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 NEXNQ0ZGT2 675 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 C8orf37Q96NL8 207 aa5.7□□□□□ -1.5
LRRK2-206ENST00000479187 IKQ13123 557 aaPredicted RBP5.69□□□□□ -1.5
LRRK2-206ENST00000479187 LMOD3Q0VAK6 560 aa5.69□□□□□ -1.5
LRRK2-206ENST00000479187 FHAD1B1AJZ9 1412 aa5.69□□□□□ -1.5
LRRK2-206ENST00000479187 UACAQ9BZF9 1416 aa5.69□□□□□ -1.5
LRRK2-206ENST00000479187 MPHOSPH10O00566 681 aaKnown RBP5.69□□□□□ -1.5
LRRK2-206ENST00000479187 RASSF8Q8NHQ8 419 aa5.69□□□□□ -1.5
LRRK2-206ENST00000479187 AK7Q96M32 723 aa5.69□□□□□ -1.5
LRRK2-206ENST00000479187 TATP17735 454 aaPredicted RBP5.69□□□□□ -1.5
LRRK2-206ENST00000479187 ZPR1O75312 459 aa5.68□□□□□ -1.5
LRRK2-206ENST00000479187 CHAF1AQ13111 956 aaPredicted RBP5.68□□□□□ -1.5
LRRK2-206ENST00000479187 LRPPRCP42704 1394 aaKnown RBP5.68□□□□□ -1.5
LRRK2-206ENST00000479187 PMFBP1Q8TBY8 1022 aa5.68□□□□□ -1.5
LRRK2-206ENST00000479187 DDX54Q8TDD1 881 aaKnown RBP5.68□□□□□ -1.5
LRRK2-206ENST00000479187 CEP89Q96ST8 783 aa5.68□□□□□ -1.5
LRRK2-206ENST00000479187 SLC4A3P48751 1232 aa5.68□□□□□ -1.5
LRRK2-206ENST00000479187 LRRFIP1Q32MZ4 808 aaKnown RBP5.68□□□□□ -1.5
LRRK2-206ENST00000479187 EEA1Q15075 1411 aa5.67□□□□□ -1.5
LRRK2-206ENST00000479187 MINK1Q8N4C8 1332 aaPredicted RBP5.67□□□□□ -1.5
LRRK2-206ENST00000479187 FAM177BA6PVY3 158 aa5.67□□□□□ -1.5
LRRK2-206ENST00000479187 BCL2L13Q9BXK5 485 aa5.67□□□□□ -1.5
LRRK2-206ENST00000479187 DDX58O95786 925 aaKnown RBP5.67□□□□□ -1.5
LRRK2-206ENST00000479187 ARHGEF6Q15052 776 aa5.67□□□□□ -1.5
LRRK2-206ENST00000479187 WWC1Q8IX03 1113 aa5.67□□□□□ -1.5
LRRK2-206ENST00000479187 BAZ1AQ9NRL2 1556 aaPredicted RBP5.67□□□□□ -1.5
LRRK2-206ENST00000479187 FANCD2Q9BXW9 1451 aa5.67□□□□□ -1.5
LRRK2-206ENST00000479187 SMG6Q86US8 1419 aaKnown RBP5.66□□□□□ -1.5
LRRK2-206ENST00000479187 KIAA1211Q6ZU35 1233 aa5.66□□□□□ -1.5
LRRK2-206ENST00000479187 ABTB2Q8N961 1025 aa5.66□□□□□ -1.5
LRRK2-206ENST00000479187 MSH6P52701 1360 aa5.66□□□□□ -1.5
LRRK2-206ENST00000479187 MCCP23508 829 aa5.66□□□□□ -1.5
LRRK2-206ENST00000479187 VTI1AQ96AJ9 217 aa5.66□□□□□ -1.5
LRRK2-206ENST00000479187 AKAP17AQ02040 695 aaKnown RBP5.65□□□□□ -1.5
LRRK2-206ENST00000479187 ZNF772Q68DY9 489 aaPredicted RBP5.65□□□□□ -1.5
LRRK2-206ENST00000479187 L1TD1Q5T7N2 865 aaKnown RBP5.65□□□□□ -1.5
LRRK2-206ENST00000479187 NLRP13Q86W25 1043 aa5.65□□□□□ -1.5
LRRK2-206ENST00000479187 TRIM44Q96DX7 344 aaPredicted RBP5.65□□□□□ -1.5
LRRK2-206ENST00000479187 TRAK1Q9UPV9 953 aa5.65□□□□□ -1.5
LRRK2-206ENST00000479187 CCDC34Q96HJ3 373 aa5.65□□□□□ -1.5
LRRK2-206ENST00000479187 IBSPP21815 317 aaPredicted RBP5.65□□□□□ -1.5
LRRK2-206ENST00000479187 CC2D1BQ5T0F9 858 aaKnown RBP5.65□□□□□ -1.51
LRRK2-206ENST00000479187 CA8P35219 290 aa5.65□□□□□ -1.51
LRRK2-206ENST00000479187 SPG7Q9UQ90 795 aa5.65□□□□□ -1.51
LRRK2-206ENST00000479187 TNIKQ9UKE5 1360 aa5.65□□□□□ -1.51
LRRK2-206ENST00000479187 GOLGA6L6A8MZA4 724 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 NUTM2GQ5VZR2 741 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 SPRYD3Q8NCJ5 442 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 NLRP6P59044 892 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 CCDC27Q2M243 656 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 WDR78Q5VTH9 848 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 HIRIP3Q9BW71 556 aaPredicted RBP5.64□□□□□ -1.51
LRRK2-206ENST00000479187 ZNF652Q9Y2D9 606 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 ZNF219Q9P2Y4 722 aaPredicted RBP5.64□□□□□ -1.51
LRRK2-206ENST00000479187 APBB1O00213 710 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 SYNE3Q6ZMZ3 975 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 ZSCAN29Q8IWY8 852 aaPredicted RBP5.64□□□□□ -1.51
LRRK2-206ENST00000479187 NUP155O75694 1391 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 CABP4P57796 275 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 ZNF622Q969S3 477 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRRK2-206ENST00000479187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRRK2-206ENST00000479187 EVC2Q86UK5 1308 aa5.64□□□□□ -1.51
LRRK2-206ENST00000479187 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
LRRK2-206ENST00000479187 PLCD3Q8N3E9 789 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 CABP2Q9NPB3 220 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 MRC2Q9UBG0 1479 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 U2AF1L5P0DN76 240 aaPredicted RBP5.63□□□□□ -1.51
LRRK2-206ENST00000479187 U2AF1Q01081 240 aaKnown RBP eCLIP5.63□□□□□ -1.51
LRRK2-206ENST00000479187 PKD2Q13563 968 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 MRS2Q9HD23 443 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 RXRBP28702 533 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 BICDL1Q6ZP65 573 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 EXOC5O00471 708 aa5.63□□□□□ -1.51
LRRK2-206ENST00000479187 KIF22Q14807 665 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms