RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
CCDC78-210ENST00000478979 ERCC6L2Q5T890 1561 aa18.98■□□□□ 0.63
CCDC78-210ENST00000478979 IPO9Q96P70 1041 aaKnown RBP18.98■□□□□ 0.63
CCDC78-210ENST00000478979 ANP32AP39687 249 aaKnown RBP18.97■□□□□ 0.63
CCDC78-210ENST00000478979 ZBED9Q6R2W3 1325 aa18.97■□□□□ 0.63
CCDC78-210ENST00000478979 CCDC136Q96JN2 1154 aa18.97■□□□□ 0.63
CCDC78-210ENST00000478979 SYCP2Q9BX26 1530 aa18.97■□□□□ 0.63
CCDC78-210ENST00000478979 CHD1O14646 1710 aa18.96■□□□□ 0.63
CCDC78-210ENST00000478979 SAMD9LQ8IVG5 1584 aa18.96■□□□□ 0.63
CCDC78-210ENST00000478979 CCDC141Q6ZP82 1450 aa18.95■□□□□ 0.62
CCDC78-210ENST00000478979 RTN4Q9NQC3 1192 aaKnown RBP18.95■□□□□ 0.62
CCDC78-210ENST00000478979 CDC42BPBQ9Y5S2 1711 aa18.94■□□□□ 0.62
CCDC78-210ENST00000478979 ZBTB47Q9UFB7 747 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-210ENST00000478979 KDM5CP41229 1560 aa18.93■□□□□ 0.62
CCDC78-210ENST00000478979 CCDC144AA2RUR9 1427 aa18.93■□□□□ 0.62
CCDC78-210ENST00000478979 SHANK2Q9UPX8 1470 aa18.92■□□□□ 0.62
CCDC78-210ENST00000478979 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
CCDC78-210ENST00000478979 FAM135AQ9P2D6 1515 aa18.91■□□□□ 0.62
CCDC78-210ENST00000478979 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
CCDC78-210ENST00000478979 CC2D1BQ5T0F9 858 aaKnown RBP18.9■□□□□ 0.62
CCDC78-210ENST00000478979 RALGAPBQ86X10 1494 aa18.89■□□□□ 0.61
CCDC78-210ENST00000478979 POLR1AO95602 1720 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-210ENST00000478979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCDC78-210ENST00000478979 AFAP1Q8N556 730 aa18.86■□□□□ 0.61
CCDC78-210ENST00000478979 PREX2Q70Z35 1606 aa18.86■□□□□ 0.61
CCDC78-210ENST00000478979 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
CCDC78-210ENST00000478979 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-210ENST00000478979 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
CCDC78-210ENST00000478979 ARHGEF5Q12774 1597 aa18.83■□□□□ 0.61
CCDC78-210ENST00000478979 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.6
CCDC78-210ENST00000478979 NUDCQ9Y266 331 aa18.81■□□□□ 0.6
CCDC78-210ENST00000478979 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
CCDC78-210ENST00000478979 EFCAB2Q5VUJ9 269 aa18.8■□□□□ 0.6
CCDC78-210ENST00000478979 PLA2R1Q13018 1463 aa18.8■□□□□ 0.6
CCDC78-210ENST00000478979 PRAG1Q86YV5 1406 aa18.79■□□□□ 0.6
CCDC78-210ENST00000478979 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
CCDC78-210ENST00000478979 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
CCDC78-210ENST00000478979 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
CCDC78-210ENST00000478979 PANK3Q9H999 370 aa18.77■□□□□ 0.6
CCDC78-210ENST00000478979 A2MP01023 1474 aa18.77■□□□□ 0.6
CCDC78-210ENST00000478979 ARID4BQ4LE39 1312 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-210ENST00000478979 TRAPPC8Q9Y2L5 1435 aa18.77■□□□□ 0.6
CCDC78-210ENST00000478979 SMG6Q86US8 1419 aaKnown RBP18.76■□□□□ 0.59
CCDC78-210ENST00000478979 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
CCDC78-210ENST00000478979 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
CCDC78-210ENST00000478979 SPAG9O60271 1321 aaKnown RBP18.75■□□□□ 0.59
CCDC78-210ENST00000478979 NEFMP07197 916 aa18.75■□□□□ 0.59
CCDC78-210ENST00000478979 NPM2Q86SE8 214 aaKnown RBP18.75■□□□□ 0.59
CCDC78-210ENST00000478979 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
CCDC78-210ENST00000478979 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
CCDC78-210ENST00000478979 RALBP1Q15311 655 aa18.73■□□□□ 0.59
CCDC78-210ENST00000478979 RNF123Q5XPI4 1314 aa18.72■□□□□ 0.59
CCDC78-210ENST00000478979 CDCA7LQ96GN5 454 aa18.72■□□□□ 0.59
CCDC78-210ENST00000478979 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
CCDC78-210ENST00000478979 TESK2Q96S53 571 aa18.71■□□□□ 0.59
CCDC78-210ENST00000478979 UBE2Q2Q8WVN8 375 aa18.71■□□□□ 0.59
CCDC78-210ENST00000478979 KIF3BO15066 747 aa18.7■□□□□ 0.58
CCDC78-210ENST00000478979 NLRP13Q86W25 1043 aa18.7■□□□□ 0.58
CCDC78-210ENST00000478979 TRPM1Q7Z4N2 1603 aa18.7■□□□□ 0.58
CCDC78-210ENST00000478979 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
CCDC78-210ENST00000478979 TMF1P82094 1093 aa18.69■□□□□ 0.58
CCDC78-210ENST00000478979 PLCH2O75038 1416 aa18.69■□□□□ 0.58
CCDC78-210ENST00000478979 WASHC2CQ9Y4E1 1318 aa18.68■□□□□ 0.58
CCDC78-210ENST00000478979 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
CCDC78-210ENST00000478979 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
CCDC78-210ENST00000478979 PER1O15534 1290 aaPredicted RBP18.68■□□□□ 0.58
CCDC78-210ENST00000478979 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
CCDC78-210ENST00000478979 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
CCDC78-210ENST00000478979 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
CCDC78-210ENST00000478979 PLIN1O60240 522 aa18.65■□□□□ 0.58
CCDC78-210ENST00000478979 DUOX2Q9NRD8 1548 aa18.65■□□□□ 0.58
CCDC78-210ENST00000478979 UNC13BO14795 1591 aa18.65■□□□□ 0.58
CCDC78-210ENST00000478979 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
CCDC78-210ENST00000478979 BRPF3Q9ULD4 1205 aa18.63■□□□□ 0.57
CCDC78-210ENST00000478979 LRPPRCP42704 1394 aaKnown RBP18.62■□□□□ 0.57
CCDC78-210ENST00000478979 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
CCDC78-210ENST00000478979 RCAN3Q9UKA8 241 aa18.62■□□□□ 0.57
CCDC78-210ENST00000478979 SCAPERQ9BY12 1400 aa18.62■□□□□ 0.57
CCDC78-210ENST00000478979 PARD3Q8TEW0 1356 aa18.61■□□□□ 0.57
CCDC78-210ENST00000478979 MAST1Q9Y2H9 1570 aa18.61■□□□□ 0.57
CCDC78-210ENST00000478979 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-210ENST00000478979 COL17A1Q9UMD9 1497 aaPredicted RBP18.6■□□□□ 0.57
CCDC78-210ENST00000478979 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
CCDC78-210ENST00000478979 PLXNC1O60486 1568 aa18.6■□□□□ 0.57
CCDC78-210ENST00000478979 PDE4AP27815 886 aa18.6■□□□□ 0.57
CCDC78-210ENST00000478979 RRP1P56182 461 aaKnown RBP18.59■□□□□ 0.57
CCDC78-210ENST00000478979 ABCC1P33527 1531 aa18.59■□□□□ 0.57
CCDC78-210ENST00000478979 E9PCH4 1651 aa18.58■□□□□ 0.57
CCDC78-210ENST00000478979 GPRASP1Q5JY77 1395 aa18.58■□□□□ 0.57
CCDC78-210ENST00000478979 TCERG1O14776 1098 aaKnown RBP18.58■□□□□ 0.56
CCDC78-210ENST00000478979 CFAP70Q5T0N1 1121 aa18.58■□□□□ 0.56
CCDC78-210ENST00000478979 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
CCDC78-210ENST00000478979 SKAP1Q86WV1 359 aa18.56■□□□□ 0.56
CCDC78-210ENST00000478979 EIF5BO60841 1220 aaKnown RBP18.56■□□□□ 0.56
CCDC78-210ENST00000478979 PRDM15P57071 1507 aaPredicted RBP18.56■□□□□ 0.56
CCDC78-210ENST00000478979 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
CCDC78-210ENST00000478979 NUTM2DQ5VT03 806 aaPredicted RBP18.55■□□□□ 0.56
CCDC78-210ENST00000478979 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
CCDC78-210ENST00000478979 FANCAO15360 1455 aa18.54■□□□□ 0.56
CCDC78-210ENST00000478979 UGGT1Q9NYU2 1555 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms