RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 ANO8Q9HCE9 1232 aaPredicted RBP7.78□□□□□ -1.16
SUPT20H-215ENST00000478911 EVI5O60447 810 aa7.76□□□□□ -1.17
SUPT20H-215ENST00000478911 ANKK1Q8NFD2 765 aa7.75□□□□□ -1.17
SUPT20H-215ENST00000478911 ITGBL1O95965 494 aaPredicted RBP7.74□□□□□ -1.17
SUPT20H-215ENST00000478911 NBR1Q14596 966 aa7.74□□□□□ -1.17
SUPT20H-215ENST00000478911 PPP1R3GB7ZBB8 358 aa7.73□□□□□ -1.17
SUPT20H-215ENST00000478911 PDE4AP27815 886 aa7.73□□□□□ -1.17
SUPT20H-215ENST00000478911 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
SUPT20H-215ENST00000478911 Q6ZNB5 142 aa7.72□□□□□ -1.17
SUPT20H-215ENST00000478911 RABGEF1Q9UJ41 708 aa7.72□□□□□ -1.17
SUPT20H-215ENST00000478911 BCAMP50895 628 aa7.71□□□□□ -1.18
SUPT20H-215ENST00000478911 PROX2Q3B8N5 592 aa7.71□□□□□ -1.18
SUPT20H-215ENST00000478911 MAP3K9P80192 1104 aa7.7□□□□□ -1.18
SUPT20H-215ENST00000478911 WDR70Q9NW82 654 aa7.7□□□□□ -1.18
SUPT20H-215ENST00000478911 P3H3Q8IVL6 736 aa7.69□□□□□ -1.18
SUPT20H-215ENST00000478911 SOWAHBA6NEL2 793 aa7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 PRKCSHP14314 528 aaPredicted RBP7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 COL9A1P20849 921 aa7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 LAPTM4BQ86VI4 370 aa7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 KCNV2Q8TDN2 545 aa7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 DDX27Q96GQ7 796 aaKnown RBP7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 LARP6Q9BRS8 491 aaKnown RBP7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 PCDHGA10Q9Y5H3 936 aa7.68□□□□□ -1.18
SUPT20H-215ENST00000478911 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
SUPT20H-215ENST00000478911 KCNC4Q03721 635 aa7.66□□□□□ -1.18
SUPT20H-215ENST00000478911 TPRNQ4KMQ1 711 aa7.65□□□□□ -1.18
SUPT20H-215ENST00000478911 TYW1BQ6NUM6 668 aa7.65□□□□□ -1.18
SUPT20H-215ENST00000478911 FBXW7Q969H0 707 aa7.65□□□□□ -1.18
SUPT20H-215ENST00000478911 ZFRQ96KR1 1074 aaKnown RBP7.65□□□□□ -1.18
SUPT20H-215ENST00000478911 KIAA1468Q9P260 1216 aa7.65□□□□□ -1.18
SUPT20H-215ENST00000478911 EMILIN3Q9NT22 766 aa7.64□□□□□ -1.19
SUPT20H-215ENST00000478911 WBP1LQ9NX94 342 aa7.64□□□□□ -1.19
SUPT20H-215ENST00000478911 PHF14O94880 888 aa7.63□□□□□ -1.19
SUPT20H-215ENST00000478911 MFSD10Q14728 455 aa7.63□□□□□ -1.19
SUPT20H-215ENST00000478911 SEPT9Q9UHD8 586 aaPredicted RBP7.63□□□□□ -1.19
SUPT20H-215ENST00000478911 ONECUT3O60422 494 aaPredicted RBP7.61□□□□□ -1.19
SUPT20H-215ENST00000478911 LAPTM4AQ15012 233 aa7.61□□□□□ -1.19
SUPT20H-215ENST00000478911 E2F4Q16254 413 aa7.61□□□□□ -1.19
SUPT20H-215ENST00000478911 FAM98CQ17RN3 349 aaKnown RBP7.59□□□□□ -1.19
SUPT20H-215ENST00000478911 C6orf132Q5T0Z8 1188 aa7.58□□□□□ -1.2
SUPT20H-215ENST00000478911 ARHGEF1Q92888 912 aaKnown RBP7.58□□□□□ -1.2
SUPT20H-215ENST00000478911 LRCH3Q96II8 777 aa7.58□□□□□ -1.2
SUPT20H-215ENST00000478911 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.58□□□□□ -1.2
SUPT20H-215ENST00000478911 TSR3Q9UJK0 312 aaKnown RBP7.58□□□□□ -1.2
SUPT20H-215ENST00000478911 HPS5Q9UPZ3 1129 aa7.58□□□□□ -1.2
SUPT20H-215ENST00000478911 TRIM6-TRIM34B2RNG4 842 aa7.57□□□□□ -1.2
SUPT20H-215ENST00000478911 GFRA3O60609 400 aa7.57□□□□□ -1.2
SUPT20H-215ENST00000478911 EPAS1Q99814 870 aa7.57□□□□□ -1.2
SUPT20H-215ENST00000478911 TRAF7Q6Q0C0 670 aa7.56□□□□□ -1.2
SUPT20H-215ENST00000478911 LCE2BO14633 110 aa7.55□□□□□ -1.2
SUPT20H-215ENST00000478911 CAMK2BQ13554 666 aa7.55□□□□□ -1.2
SUPT20H-215ENST00000478911 RBM33Q96EV2 1170 aaKnown RBP7.54□□□□□ -1.2
SUPT20H-215ENST00000478911 ARIH1Q9Y4X5 557 aaPredicted RBP7.53□□□□□ -1.2
SUPT20H-215ENST00000478911 DPYSL4O14531 572 aa7.51□□□□□ -1.21
SUPT20H-215ENST00000478911 PPP4CP60510 307 aa7.51□□□□□ -1.21
SUPT20H-215ENST00000478911 PRKD2Q9BZL6 878 aa7.51□□□□□ -1.21
SUPT20H-215ENST00000478911 TESPA1A2RU30 521 aaPredicted RBP7.5□□□□□ -1.21
SUPT20H-215ENST00000478911 NRG2O14511 850 aaPredicted RBP7.5□□□□□ -1.21
SUPT20H-215ENST00000478911 SEMA3EO15041 775 aa7.5□□□□□ -1.21
SUPT20H-215ENST00000478911 PACS2Q86VP3 889 aa7.5□□□□□ -1.21
SUPT20H-215ENST00000478911 TJAP1Q5JTD0 557 aa7.49□□□□□ -1.21
SUPT20H-215ENST00000478911 LMOD2Q6P5Q4 547 aa7.49□□□□□ -1.21
SUPT20H-215ENST00000478911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.49□□□□□ -1.21
SUPT20H-215ENST00000478911 DDX12PQ92771 950 aa7.49□□□□□ -1.21
SUPT20H-215ENST00000478911 TSKSQ9UJT2 592 aa7.48□□□□□ -1.21
SUPT20H-215ENST00000478911 TULP1O00294 542 aaPredicted RBP7.46□□□□□ -1.22
SUPT20H-215ENST00000478911 MAP3K7O43318 606 aa7.46□□□□□ -1.22
SUPT20H-215ENST00000478911 EN1Q05925 392 aaPredicted RBP7.46□□□□□ -1.22
SUPT20H-215ENST00000478911 SAMD7Q7Z3H4 446 aa7.46□□□□□ -1.22
SUPT20H-215ENST00000478911 MTRQ99707 1265 aa7.46□□□□□ -1.22
SUPT20H-215ENST00000478911 IL21Q9HBE4 155 aa7.46□□□□□ -1.22
SUPT20H-215ENST00000478911 V9GY48 417 aaPredicted RBP7.46□□□□□ -1.22
SUPT20H-215ENST00000478911 TSR1Q2NL82 804 aaKnown RBP7.45□□□□□ -1.22
SUPT20H-215ENST00000478911 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
SUPT20H-215ENST00000478911 SMAPO00193 183 aa7.44□□□□□ -1.22
SUPT20H-215ENST00000478911 ZNF787Q6DD87 383 aa7.42□□□□□ -1.22
SUPT20H-215ENST00000478911 CDCA7LQ96GN5 454 aa7.42□□□□□ -1.22
SUPT20H-215ENST00000478911 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.42□□□□□ -1.22
SUPT20H-215ENST00000478911 PDIA6Q15084 440 aa7.41□□□□□ -1.22
SUPT20H-215ENST00000478911 SMYD5Q6GMV2 418 aa7.41□□□□□ -1.22
SUPT20H-215ENST00000478911 ZNF516Q92618 1163 aa7.41□□□□□ -1.22
SUPT20H-215ENST00000478911 PDZRN3Q9UPQ7 1066 aa7.41□□□□□ -1.22
SUPT20H-215ENST00000478911 SPDYE16A6NNV3 312 aaPredicted RBP7.4□□□□□ -1.22
SUPT20H-215ENST00000478911 PRSS12P56730 875 aa7.4□□□□□ -1.22
SUPT20H-215ENST00000478911 FAM198AQ9UFP1 575 aa7.4□□□□□ -1.22
SUPT20H-215ENST00000478911 NBPF26B4DH59 902 aa7.39□□□□□ -1.23
SUPT20H-215ENST00000478911 RNF40O75150 1001 aa7.39□□□□□ -1.23
SUPT20H-215ENST00000478911 MLLT3P42568 568 aaPredicted RBP7.39□□□□□ -1.23
SUPT20H-215ENST00000478911 ZC3H15Q8WU90 426 aaKnown RBP7.39□□□□□ -1.23
SUPT20H-215ENST00000478911 TATDN2Q93075 761 aa7.39□□□□□ -1.23
SUPT20H-215ENST00000478911 PNMA3Q9UL41 463 aa7.39□□□□□ -1.23
SUPT20H-215ENST00000478911 CERKQ8TCT0 537 aa7.38□□□□□ -1.23
SUPT20H-215ENST00000478911 C3orf80F5H4A9 247 aa7.37□□□□□ -1.23
SUPT20H-215ENST00000478911 GGCXP38435 758 aa7.37□□□□□ -1.23
SUPT20H-215ENST00000478911 APLP1P51693 650 aa7.37□□□□□ -1.23
SUPT20H-215ENST00000478911 HDGFP51858 240 aaKnown RBP7.37□□□□□ -1.23
SUPT20H-215ENST00000478911 NKX2-3Q8TAU0 364 aa7.37□□□□□ -1.23
SUPT20H-215ENST00000478911 ZNF775Q96BV0 537 aaPredicted RBP7.36□□□□□ -1.23
SUPT20H-215ENST00000478911 RBM26Q5T8P6 1007 aaKnown RBP7.34□□□□□ -1.23
SUPT20H-215ENST00000478911 NUDT18Q6ZVK8 323 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms