RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 ARHGEF5Q12774 1597 aa24.59■■□□□ 1.53
PDE8A-204ENST00000478717 ST20-MTHFSA0A0A6YYL1 179 aa24.57■■□□□ 1.52
PDE8A-204ENST00000478717 RGL3Q3MIN7 710 aa24.57■■□□□ 1.52
PDE8A-204ENST00000478717 DHX29Q7Z478 1369 aaKnown RBP24.57■■□□□ 1.52
PDE8A-204ENST00000478717 UHRF1BP1Q6BDS2 1440 aa24.56■■□□□ 1.52
PDE8A-204ENST00000478717 ARHGAP5Q13017 1502 aa24.55■■□□□ 1.52
PDE8A-204ENST00000478717 SYCP2Q9BX26 1530 aa24.55■■□□□ 1.52
PDE8A-204ENST00000478717 KDM5DQ9BY66 1539 aa24.55■■□□□ 1.52
PDE8A-204ENST00000478717 PREX2Q70Z35 1606 aa24.54■■□□□ 1.52
PDE8A-204ENST00000478717 KDM5CP41229 1560 aa24.54■■□□□ 1.52
PDE8A-204ENST00000478717 POLR1AO95602 1720 aaPredicted RBP24.53■■□□□ 1.52
PDE8A-204ENST00000478717 TTC37Q6PGP7 1564 aa24.53■■□□□ 1.52
PDE8A-204ENST00000478717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.53■■□□□ 1.522e-10■■■□□ 15.1
PDE8A-204ENST00000478717 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.52■■□□□ 1.52
PDE8A-204ENST00000478717 FAM135AQ9P2D6 1515 aa24.52■■□□□ 1.52
PDE8A-204ENST00000478717 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
PDE8A-204ENST00000478717 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
PDE8A-204ENST00000478717 ZBED9Q6R2W3 1325 aa24.48■■□□□ 1.51
PDE8A-204ENST00000478717 SHROOM2Q13796 1616 aa24.48■■□□□ 1.51
PDE8A-204ENST00000478717 ARHGEF12Q9NZN5 1544 aa24.47■■□□□ 1.51
PDE8A-204ENST00000478717 ROCK2O75116 1388 aaKnown RBP24.47■■□□□ 1.51
PDE8A-204ENST00000478717 ARID4BQ4LE39 1312 aaPredicted RBP24.47■■□□□ 1.51
PDE8A-204ENST00000478717 CCDC144AA2RUR9 1427 aa24.46■■□□□ 1.51
PDE8A-204ENST00000478717 NBPF1Q3BBV0 1214 aa24.46■■□□□ 1.51
PDE8A-204ENST00000478717 ABCC2Q92887 1545 aa24.45■■□□□ 1.51
PDE8A-204ENST00000478717 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.5
PDE8A-204ENST00000478717 RTL5Q5HYW3 569 aaPredicted RBP24.45■■□□□ 1.5
PDE8A-204ENST00000478717 PLA2R1Q13018 1463 aa24.42■■□□□ 1.5
PDE8A-204ENST00000478717 ERICH6BQ5W0A0 696 aa24.41■■□□□ 1.5
PDE8A-204ENST00000478717 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
PDE8A-204ENST00000478717 TMC1Q8TDI8 760 aa24.38■■□□□ 1.49
PDE8A-204ENST00000478717 PRAG1Q86YV5 1406 aa24.36■■□□□ 1.49
PDE8A-204ENST00000478717 IPO9Q96P70 1041 aaKnown RBP24.36■■□□□ 1.49
PDE8A-204ENST00000478717 PNISRQ8TF01 805 aaKnown RBP24.35■■□□□ 1.49
PDE8A-204ENST00000478717 PLCH2O75038 1416 aa24.35■■□□□ 1.49
PDE8A-204ENST00000478717 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
PDE8A-204ENST00000478717 ZBTB47Q9UFB7 747 aaPredicted RBP24.35■■□□□ 1.49
PDE8A-204ENST00000478717 MAST1Q9Y2H9 1570 aa24.34■■□□□ 1.49
PDE8A-204ENST00000478717 ANP32AP39687 249 aaKnown RBP24.34■■□□□ 1.49
PDE8A-204ENST00000478717 AFAP1Q8N556 730 aa24.34■■□□□ 1.49
PDE8A-204ENST00000478717 TRAPPC8Q9Y2L5 1435 aa24.32■■□□□ 1.48
PDE8A-204ENST00000478717 A2MP01023 1474 aa24.31■■□□□ 1.48
PDE8A-204ENST00000478717 UNC13BO14795 1591 aa24.31■■□□□ 1.48
PDE8A-204ENST00000478717 ZCCHC11Q5TAX3 1644 aaKnown RBP24.29■■□□□ 1.48
PDE8A-204ENST00000478717 DUOX2Q9NRD8 1548 aa24.28■■□□□ 1.48
PDE8A-204ENST00000478717 PLXNC1O60486 1568 aa24.27■■□□□ 1.48
PDE8A-204ENST00000478717 NPM2Q86SE8 214 aaKnown RBP24.26■■□□□ 1.47
PDE8A-204ENST00000478717 TRPM1Q7Z4N2 1603 aa24.25■■□□□ 1.47
PDE8A-204ENST00000478717 LAS1LQ9Y4W2 734 aaKnown RBP24.25■■□□□ 1.47
PDE8A-204ENST00000478717 SPAG9O60271 1321 aaKnown RBP24.25■■□□□ 1.47
PDE8A-204ENST00000478717 MYBBP1AQ9BQG0 1328 aaKnown RBP24.25■■□□□ 1.47
PDE8A-204ENST00000478717 IQGAP3Q86VI3 1631 aa24.24■■□□□ 1.47
PDE8A-204ENST00000478717 CLASP1Q7Z460 1538 aa24.24■■□□□ 1.47
PDE8A-204ENST00000478717 RALBP1Q15311 655 aa24.24■■□□□ 1.47
PDE8A-204ENST00000478717 TESK2Q96S53 571 aa24.23■■□□□ 1.47
PDE8A-204ENST00000478717 ERBINQ96RT1 1412 aa24.23■■□□□ 1.47
PDE8A-204ENST00000478717 NUDCQ9Y266 331 aa24.22■■□□□ 1.47
PDE8A-204ENST00000478717 UHRF1BP1LA0JNW5 1464 aa24.21■■□□□ 1.47
PDE8A-204ENST00000478717 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
PDE8A-204ENST00000478717 SMG6Q86US8 1419 aaKnown RBP24.21■■□□□ 1.47
PDE8A-204ENST00000478717 GPRASP1Q5JY77 1395 aa24.21■■□□□ 1.47
PDE8A-204ENST00000478717 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
PDE8A-204ENST00000478717 ABCC1P33527 1531 aa24.19■■□□□ 1.46
PDE8A-204ENST00000478717 CC2D1BQ5T0F9 858 aaKnown RBP24.19■■□□□ 1.46
PDE8A-204ENST00000478717 BRD4O60885 1362 aaPredicted RBP24.18■■□□□ 1.46
PDE8A-204ENST00000478717 MAGI2Q86UL8 1455 aa24.17■■□□□ 1.46
PDE8A-204ENST00000478717 PANK3Q9H999 370 aa24.17■■□□□ 1.46
PDE8A-204ENST00000478717 ATP10AO60312 1499 aa24.16■■□□□ 1.46
PDE8A-204ENST00000478717 NEFMP07197 916 aa24.16■■□□□ 1.46
PDE8A-204ENST00000478717 LRPPRCP42704 1394 aaKnown RBP24.14■■□□□ 1.46
PDE8A-204ENST00000478717 KTN1Q86UP2 1357 aaKnown RBP24.14■■□□□ 1.46
PDE8A-204ENST00000478717 NLRP13Q86W25 1043 aa24.13■■□□□ 1.45
PDE8A-204ENST00000478717 TMF1P82094 1093 aa24.12■■□□□ 1.45
PDE8A-204ENST00000478717 E9PCH4 1651 aa24.12■■□□□ 1.45
PDE8A-204ENST00000478717 PARD3Q8TEW0 1356 aa24.11■■□□□ 1.45
PDE8A-204ENST00000478717 PRDM15P57071 1507 aaPredicted RBP24.11■■□□□ 1.45
PDE8A-204ENST00000478717 KIF3BO15066 747 aa24.1■■□□□ 1.45
PDE8A-204ENST00000478717 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
PDE8A-204ENST00000478717 BRPF3Q9ULD4 1205 aa24.09■■□□□ 1.45
PDE8A-204ENST00000478717 EIF5BO60841 1220 aaKnown RBP24.08■■□□□ 1.45
PDE8A-204ENST00000478717 UBE2Q2Q8WVN8 375 aa24.07■■□□□ 1.44
PDE8A-204ENST00000478717 RTEL1-TNFRSF6BF6WH68 1400 aa24.07■■□□□ 1.44
PDE8A-204ENST00000478717 SCAPERQ9BY12 1400 aa24.06■■□□□ 1.44
PDE8A-204ENST00000478717 FANCAO15360 1455 aa24.06■■□□□ 1.44
PDE8A-204ENST00000478717 WDR7Q9Y4E6 1490 aa24.06■■□□□ 1.44
PDE8A-204ENST00000478717 RNF123Q5XPI4 1314 aa24.06■■□□□ 1.44
PDE8A-204ENST00000478717 ZFYVE16Q7Z3T8 1539 aa24.05■■□□□ 1.44
PDE8A-204ENST00000478717 EIF2AK4Q9P2K8 1649 aaKnown RBP24.03■■□□□ 1.44
PDE8A-204ENST00000478717 LAMC1P11047 1609 aa24.01■■□□□ 1.43
PDE8A-204ENST00000478717 WASHC2CQ9Y4E1 1318 aa24■■□□□ 1.43
PDE8A-204ENST00000478717 ARAP3Q8WWN8 1544 aa23.98■■□□□ 1.43
PDE8A-204ENST00000478717 CDCA7LQ96GN5 454 aa23.98■■□□□ 1.43
PDE8A-204ENST00000478717 ADGRL1O94910 1474 aa23.98■■□□□ 1.43
PDE8A-204ENST00000478717 PTPRTO14522 1441 aa23.98■■□□□ 1.43
PDE8A-204ENST00000478717 KANK1Q14678 1352 aa23.98■■□□□ 1.43
PDE8A-204ENST00000478717 ATP7AQ04656 1500 aa23.97■■□□□ 1.43
PDE8A-204ENST00000478717 TRPM2O94759 1503 aa23.96■■□□□ 1.43
PDE8A-204ENST00000478717 ASXL2Q76L83 1435 aa23.95■■□□□ 1.42
PDE8A-204ENST00000478717 CLTCL1P53675 1640 aa23.94■■□□□ 1.42
PDE8A-204ENST00000478717 MADDQ8WXG6 1647 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms