RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 SMYD5Q6GMV2 418 aa6.22□□□□□ -1.41
GARNL3-214ENST00000478696 RBM33Q96EV2 1170 aaKnown RBP6.22□□□□□ -1.41
GARNL3-214ENST00000478696 TK2O00142 265 aa6.21□□□□□ -1.42
GARNL3-214ENST00000478696 C6orf132Q5T0Z8 1188 aa6.21□□□□□ -1.42
GARNL3-214ENST00000478696 POTEEQ6S8J3 1075 aa6.21□□□□□ -1.42
GARNL3-214ENST00000478696 SPNS2Q8IVW8 549 aa6.21□□□□□ -1.42
GARNL3-214ENST00000478696 PPP1R3GB7ZBB8 358 aa6.2□□□□□ -1.42
GARNL3-214ENST00000478696 TULP1O00294 542 aaPredicted RBP6.2□□□□□ -1.42
GARNL3-214ENST00000478696 EN1Q05925 392 aaPredicted RBP6.2□□□□□ -1.42
GARNL3-214ENST00000478696 ADGRD1Q6QNK2 874 aa6.2□□□□□ -1.42
GARNL3-214ENST00000478696 DMRTA1Q5VZB9 504 aa6.19□□□□□ -1.42
GARNL3-214ENST00000478696 CERKQ8TCT0 537 aa6.18□□□□□ -1.42
GARNL3-214ENST00000478696 SLC4A5Q9BY07 1137 aa6.18□□□□□ -1.42
GARNL3-214ENST00000478696 MYT1LQ9UL68 1186 aa6.18□□□□□ -1.42
GARNL3-214ENST00000478696 SEMA3EO15041 775 aa6.17□□□□□ -1.42
GARNL3-214ENST00000478696 OSBPP22059 807 aa6.17□□□□□ -1.42
GARNL3-214ENST00000478696 NBPF3Q9H094 633 aa6.17□□□□□ -1.42
GARNL3-214ENST00000478696 GOLGA8CPA6NN73 597 aa6.16□□□□□ -1.42
GARNL3-214ENST00000478696 MLLT3P42568 568 aaPredicted RBP6.16□□□□□ -1.42
GARNL3-214ENST00000478696 MMRN1Q13201 1228 aa6.16□□□□□ -1.42
GARNL3-214ENST00000478696 ZBED2Q9BTP6 218 aa6.16□□□□□ -1.42
GARNL3-214ENST00000478696 VPS9D1Q9Y2B5 631 aa6.16□□□□□ -1.42
GARNL3-214ENST00000478696 ONECUT3O60422 494 aaPredicted RBP6.15□□□□□ -1.42
GARNL3-214ENST00000478696 TSR1Q2NL82 804 aaKnown RBP6.15□□□□□ -1.42
GARNL3-214ENST00000478696 COL9A1P20849 921 aa6.14□□□□□ -1.43
GARNL3-214ENST00000478696 PACS2Q86VP3 889 aa6.14□□□□□ -1.43
GARNL3-214ENST00000478696 MRPL50Q8N5N7 158 aaKnown RBP6.14□□□□□ -1.43
GARNL3-214ENST00000478696 RNF166Q96A37 237 aaPredicted RBP6.14□□□□□ -1.43
GARNL3-214ENST00000478696 RABGEF1Q9UJ41 708 aa6.14□□□□□ -1.43
GARNL3-214ENST00000478696 NUTM2FA1L443 756 aa6.13□□□□□ -1.43
GARNL3-214ENST00000478696 HRO43593 1189 aa6.13□□□□□ -1.43
GARNL3-214ENST00000478696 TESPA1A2RU30 521 aaPredicted RBP6.12□□□□□ -1.43
GARNL3-214ENST00000478696 TRIM6-TRIM34B2RNG4 842 aa6.12□□□□□ -1.43
GARNL3-214ENST00000478696 SLC24A1O60721 1099 aa6.12□□□□□ -1.43
GARNL3-214ENST00000478696 PRSS12P56730 875 aa6.12□□□□□ -1.43
GARNL3-214ENST00000478696 PROX2Q3B8N5 592 aa6.12□□□□□ -1.43
GARNL3-214ENST00000478696 CDCA7LQ96GN5 454 aa6.11□□□□□ -1.43
GARNL3-214ENST00000478696 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
GARNL3-214ENST00000478696 BHMG1C9JSJ3 638 aaPredicted RBP6.1□□□□□ -1.43
GARNL3-214ENST00000478696 LAPTM4BQ86VI4 370 aa6.1□□□□□ -1.43
GARNL3-214ENST00000478696 RBM27Q9P2N5 1060 aaKnown RBP6.1□□□□□ -1.43
GARNL3-214ENST00000478696 NBPF26B4DH59 902 aa6.09□□□□□ -1.43
GARNL3-214ENST00000478696 FCHSD2O94868 740 aa6.09□□□□□ -1.43
GARNL3-214ENST00000478696 PRIM1P49642 420 aaKnown RBP6.09□□□□□ -1.43
GARNL3-214ENST00000478696 HDGFP51858 240 aaKnown RBP6.09□□□□□ -1.43
GARNL3-214ENST00000478696 CDHR5Q9HBB8 845 aa6.09□□□□□ -1.43
GARNL3-214ENST00000478696 WNT2BQ93097 391 aa6.08□□□□□ -1.44
GARNL3-214ENST00000478696 KCTD12Q96CX2 325 aaKnown RBP6.08□□□□□ -1.44
GARNL3-214ENST00000478696 PTGDRQ13258 359 aa6.07□□□□□ -1.44
GARNL3-214ENST00000478696 RBM26Q5T8P6 1007 aaKnown RBP6.07□□□□□ -1.44
GARNL3-214ENST00000478696 ANKK1Q8NFD2 765 aa6.07□□□□□ -1.44
GARNL3-214ENST00000478696 HCSTQ9UBK5 93 aa6.07□□□□□ -1.44
GARNL3-214ENST00000478696 TSKSQ9UJT2 592 aa6.07□□□□□ -1.44
GARNL3-214ENST00000478696 FAM98CQ17RN3 349 aaKnown RBP6.06□□□□□ -1.44
GARNL3-214ENST00000478696 NPDC1Q9NQX5 325 aaPredicted RBP6.06□□□□□ -1.44
GARNL3-214ENST00000478696 PNMA3Q9UL41 463 aa6.06□□□□□ -1.44
GARNL3-214ENST00000478696 SLC4A3P48751 1232 aa6.05□□□□□ -1.44
GARNL3-214ENST00000478696 HIC1Q14526 733 aa6.05□□□□□ -1.44
GARNL3-214ENST00000478696 PADI6Q6TGC4 694 aa6.05□□□□□ -1.44
GARNL3-214ENST00000478696 GPIHBP1Q8IV16 184 aa6.05□□□□□ -1.44
GARNL3-214ENST00000478696 TATDN2Q93075 761 aa6.05□□□□□ -1.44
GARNL3-214ENST00000478696 ZFRQ96KR1 1074 aaKnown RBP6.05□□□□□ -1.44
GARNL3-214ENST00000478696 SEPT9Q9UHD8 586 aaPredicted RBP6.05□□□□□ -1.44
GARNL3-214ENST00000478696 NUDT18Q6ZVK8 323 aa6.04□□□□□ -1.44
GARNL3-214ENST00000478696 PTPN5P54829 565 aa6.03□□□□□ -1.44
GARNL3-214ENST00000478696 RBM46Q8TBY0 533 aaKnown RBP6.03□□□□□ -1.44
GARNL3-214ENST00000478696 LRCH3Q96II8 777 aa6.03□□□□□ -1.44
GARNL3-214ENST00000478696 SMAPO00193 183 aa6.02□□□□□ -1.45
GARNL3-214ENST00000478696 GNPATO15228 680 aa6.02□□□□□ -1.45
GARNL3-214ENST00000478696 THSD4Q6ZMP0 1018 aa6.02□□□□□ -1.45
GARNL3-214ENST00000478696 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.02□□□□□ -1.45
GARNL3-214ENST00000478696 SOWAHBA6NEL2 793 aa6.01□□□□□ -1.45
GARNL3-214ENST00000478696 OATP04181 439 aa6.01□□□□□ -1.45
GARNL3-214ENST00000478696 TTC13Q8NBP0 860 aa6.01□□□□□ -1.45
GARNL3-214ENST00000478696 NECTIN2Q92692 538 aa6.01□□□□□ -1.45
GARNL3-214ENST00000478696 NYAP1Q6ZVC0 841 aa6□□□□□ -1.45
GARNL3-214ENST00000478696 FAM198AQ9UFP1 575 aa6□□□□□ -1.45
GARNL3-214ENST00000478696 RNF40O75150 1001 aa5.99□□□□□ -1.45
GARNL3-214ENST00000478696 PPP4CP60510 307 aa5.99□□□□□ -1.45
GARNL3-214ENST00000478696 LMOD2Q6P5Q4 547 aa5.99□□□□□ -1.45
GARNL3-214ENST00000478696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.99□□□□□ -1.45
GARNL3-214ENST00000478696 BCANQ96GW7 911 aa5.99□□□□□ -1.45
GARNL3-214ENST00000478696 TSR3Q9UJK0 312 aaKnown RBP5.99□□□□□ -1.45
GARNL3-214ENST00000478696 DNAJB2P25686 324 aa5.98□□□□□ -1.45
GARNL3-214ENST00000478696 BCAMP50895 628 aa5.98□□□□□ -1.45
GARNL3-214ENST00000478696 SAMD7Q7Z3H4 446 aa5.98□□□□□ -1.45
GARNL3-214ENST00000478696 SLF2Q8IX21 1173 aa5.98□□□□□ -1.45
GARNL3-214ENST00000478696 EYA1Q99502 592 aa5.98□□□□□ -1.45
GARNL3-214ENST00000478696 HPS5Q9UPZ3 1129 aa5.97□□□□□ -1.45
GARNL3-214ENST00000478696 ADGRG1Q9Y653 693 aa5.97□□□□□ -1.45
GARNL3-214ENST00000478696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.96□□□□□ -1.46
GARNL3-214ENST00000478696 RSPH4AQ5TD94 716 aa5.96□□□□□ -1.46
GARNL3-214ENST00000478696 KRI1Q8N9T8 703 aaKnown RBP5.96□□□□□ -1.46
GARNL3-214ENST00000478696 SWT1Q5T5J6 900 aaKnown RBP5.95□□□□□ -1.46
GARNL3-214ENST00000478696 RCCD1A6NED2 376 aa5.94□□□□□ -1.46
GARNL3-214ENST00000478696 C3orf80F5H4A9 247 aa5.94□□□□□ -1.46
GARNL3-214ENST00000478696 GPR37O15354 613 aa5.94□□□□□ -1.46
GARNL3-214ENST00000478696 FECHP22830 423 aa5.94□□□□□ -1.46
GARNL3-214ENST00000478696 MAP2K5Q13163 448 aa5.94□□□□□ -1.46
GARNL3-214ENST00000478696 FAM161AQ3B820 660 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms