RNA–Protein interactions for RNA: ENST00000478695.1

DDX1-206, Transcript of DEAD-box helicase 1, humanhuman

TSL 4

Gene DDX1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-206ENST00000478695 SLC4A5Q9BY07 1137 aa12.13□□□□□ -0.47
DDX1-206ENST00000478695 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
DDX1-206ENST00000478695 PPP1R3GB7ZBB8 358 aa12.11□□□□□ -0.47
DDX1-206ENST00000478695 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
DDX1-206ENST00000478695 NBR1Q14596 966 aa12.1□□□□□ -0.47
DDX1-206ENST00000478695 NBPF3Q9H094 633 aa12.09□□□□□ -0.47
DDX1-206ENST00000478695 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
DDX1-206ENST00000478695 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
DDX1-206ENST00000478695 RBM33Q96EV2 1170 aaKnown RBP12.08□□□□□ -0.48
DDX1-206ENST00000478695 HRO43593 1189 aa12.07□□□□□ -0.48
DDX1-206ENST00000478695 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
DDX1-206ENST00000478695 MAP3K7O43318 606 aa12.06□□□□□ -0.48
DDX1-206ENST00000478695 C6orf132Q5T0Z8 1188 aa12.05□□□□□ -0.48
DDX1-206ENST00000478695 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
DDX1-206ENST00000478695 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
DDX1-206ENST00000478695 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
DDX1-206ENST00000478695 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
DDX1-206ENST00000478695 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
DDX1-206ENST00000478695 EN1Q05925 392 aaPredicted RBP12.02□□□□□ -0.49
DDX1-206ENST00000478695 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
DDX1-206ENST00000478695 RGS20O76081 388 aa12□□□□□ -0.49
DDX1-206ENST00000478695 RABGEF1Q9UJ41 708 aa12□□□□□ -0.49
DDX1-206ENST00000478695 COL9A1P20849 921 aa11.99□□□□□ -0.49
DDX1-206ENST00000478695 KCNV2Q8TDN2 545 aa11.98□□□□□ -0.49
DDX1-206ENST00000478695 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
DDX1-206ENST00000478695 CERKQ8TCT0 537 aa11.97□□□□□ -0.49
DDX1-206ENST00000478695 BHMG1C9JSJ3 638 aaPredicted RBP11.96□□□□□ -0.49
DDX1-206ENST00000478695 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
DDX1-206ENST00000478695 WNT2BQ93097 391 aa11.95□□□□□ -0.5
DDX1-206ENST00000478695 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
DDX1-206ENST00000478695 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
DDX1-206ENST00000478695 LAPTM4BQ86VI4 370 aa11.93□□□□□ -0.5
DDX1-206ENST00000478695 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
DDX1-206ENST00000478695 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
DDX1-206ENST00000478695 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
DDX1-206ENST00000478695 KIAA1468Q9P260 1216 aa11.92□□□□□ -0.5
DDX1-206ENST00000478695 OSBPP22059 807 aa11.89□□□□□ -0.51
DDX1-206ENST00000478695 PTPN5P54829 565 aa11.89□□□□□ -0.51
DDX1-206ENST00000478695 A0A0G2JS52 829 aa11.87□□□□□ -0.51
DDX1-206ENST00000478695 THSD4Q6ZMP0 1018 aa11.87□□□□□ -0.51
DDX1-206ENST00000478695 PRSS12P56730 875 aa11.86□□□□□ -0.51
DDX1-206ENST00000478695 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
DDX1-206ENST00000478695 NBPF26B4DH59 902 aa11.85□□□□□ -0.51
DDX1-206ENST00000478695 FAM98CQ17RN3 349 aaKnown RBP11.85□□□□□ -0.51
DDX1-206ENST00000478695 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
DDX1-206ENST00000478695 ZFRQ96KR1 1074 aaKnown RBP11.83□□□□□ -0.52
DDX1-206ENST00000478695 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
DDX1-206ENST00000478695 SMYD5Q6GMV2 418 aa11.82□□□□□ -0.52
DDX1-206ENST00000478695 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
DDX1-206ENST00000478695 TSKSQ9UJT2 592 aa11.81□□□□□ -0.52
DDX1-206ENST00000478695 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
DDX1-206ENST00000478695 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
DDX1-206ENST00000478695 LRCH3Q96II8 777 aa11.8□□□□□ -0.52
DDX1-206ENST00000478695 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
DDX1-206ENST00000478695 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
DDX1-206ENST00000478695 SOWAHBA6NEL2 793 aa11.78□□□□□ -0.52
DDX1-206ENST00000478695 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.78□□□□□ -0.52
DDX1-206ENST00000478695 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
DDX1-206ENST00000478695 NYAP1Q6ZVC0 841 aa11.77□□□□□ -0.53
DDX1-206ENST00000478695 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
DDX1-206ENST00000478695 SEMA3EO15041 775 aa11.76□□□□□ -0.53
DDX1-206ENST00000478695 BCAMP50895 628 aa11.76□□□□□ -0.53
DDX1-206ENST00000478695 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
DDX1-206ENST00000478695 Q6ZNB5 142 aa11.75□□□□□ -0.53
DDX1-206ENST00000478695 TATDN2Q93075 761 aa11.75□□□□□ -0.53
DDX1-206ENST00000478695 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
DDX1-206ENST00000478695 SMAPO00193 183 aa11.72□□□□□ -0.53
DDX1-206ENST00000478695 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
DDX1-206ENST00000478695 TSR3Q9UJK0 312 aaKnown RBP11.72□□□□□ -0.53
DDX1-206ENST00000478695 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
DDX1-206ENST00000478695 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
DDX1-206ENST00000478695 FCHSD2O94868 740 aa11.7□□□□□ -0.54
DDX1-206ENST00000478695 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
DDX1-206ENST00000478695 NPDC1Q9NQX5 325 aaPredicted RBP11.7□□□□□ -0.54
DDX1-206ENST00000478695 PPP4CP60510 307 aa11.69□□□□□ -0.54
DDX1-206ENST00000478695 PTGDRQ13258 359 aa11.69□□□□□ -0.54
DDX1-206ENST00000478695 KDM2AQ9Y2K7 1162 aa11.69□□□□□ -0.54
DDX1-206ENST00000478695 TESPA1A2RU30 521 aaPredicted RBP11.68□□□□□ -0.54
DDX1-206ENST00000478695 RNF40O75150 1001 aa11.68□□□□□ -0.54
DDX1-206ENST00000478695 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
DDX1-206ENST00000478695 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
DDX1-206ENST00000478695 LCE2BO14633 110 aa11.67□□□□□ -0.54
DDX1-206ENST00000478695 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
DDX1-206ENST00000478695 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
DDX1-206ENST00000478695 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.54
DDX1-206ENST00000478695 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
DDX1-206ENST00000478695 HIC1Q14526 733 aa11.61□□□□□ -0.55
DDX1-206ENST00000478695 DNAJB2P25686 324 aa11.59□□□□□ -0.55
DDX1-206ENST00000478695 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
DDX1-206ENST00000478695 C3orf80F5H4A9 247 aa11.58□□□□□ -0.56
DDX1-206ENST00000478695 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
DDX1-206ENST00000478695 KCNC4Q03721 635 aa11.57□□□□□ -0.56
DDX1-206ENST00000478695 SWT1Q5T5J6 900 aaKnown RBP11.57□□□□□ -0.56
DDX1-206ENST00000478695 EYA1Q99502 592 aa11.57□□□□□ -0.56
DDX1-206ENST00000478695 OATP04181 439 aa11.56□□□□□ -0.56
DDX1-206ENST00000478695 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
DDX1-206ENST00000478695 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
DDX1-206ENST00000478695 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
DDX1-206ENST00000478695 GNPATO15228 680 aa11.53□□□□□ -0.56
DDX1-206ENST00000478695 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms