RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 GFRA3O60609 400 aa9.36□□□□□ -0.91
GPNMB-210ENST00000478451 HAP1P54257 671 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-210ENST00000478451 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
GPNMB-210ENST00000478451 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
GPNMB-210ENST00000478451 E2F4Q16254 413 aa9.35□□□□□ -0.91
GPNMB-210ENST00000478451 EVI5O60447 810 aa9.34□□□□□ -0.91
GPNMB-210ENST00000478451 NYAP1Q6ZVC0 841 aa9.34□□□□□ -0.91
GPNMB-210ENST00000478451 ZBED2Q9BTP6 218 aa9.34□□□□□ -0.91
GPNMB-210ENST00000478451 DPYSL4O14531 572 aa9.33□□□□□ -0.92
GPNMB-210ENST00000478451 NRG2O14511 850 aaPredicted RBP9.32□□□□□ -0.92
GPNMB-210ENST00000478451 PTPREP23469 700 aa9.31□□□□□ -0.92
GPNMB-210ENST00000478451 KCNC4Q03721 635 aa9.3□□□□□ -0.92
GPNMB-210ENST00000478451 ZNF787Q6DD87 383 aa9.3□□□□□ -0.92
GPNMB-210ENST00000478451 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
GPNMB-210ENST00000478451 ZNF454Q8N9F8 522 aa9.28□□□□□ -0.92
GPNMB-210ENST00000478451 ZNF775Q96BV0 537 aaPredicted RBP9.28□□□□□ -0.92
GPNMB-210ENST00000478451 ANKK1Q8NFD2 765 aa9.27□□□□□ -0.93
GPNMB-210ENST00000478451 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
GPNMB-210ENST00000478451 ARIH1Q9Y4X5 557 aaPredicted RBP9.27□□□□□ -0.93
GPNMB-210ENST00000478451 FOSBP53539 338 aa9.26□□□□□ -0.93
GPNMB-210ENST00000478451 PDIA6Q15084 440 aa9.26□□□□□ -0.93
GPNMB-210ENST00000478451 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
GPNMB-210ENST00000478451 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-210ENST00000478451 P3H3Q8IVL6 736 aa9.22□□□□□ -0.93
GPNMB-210ENST00000478451 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
GPNMB-210ENST00000478451 PCDHGA10Q9Y5H3 936 aa9.21□□□□□ -0.94
GPNMB-210ENST00000478451 PHF14O94880 888 aa9.2□□□□□ -0.94
GPNMB-210ENST00000478451 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
GPNMB-210ENST00000478451 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
GPNMB-210ENST00000478451 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
GPNMB-210ENST00000478451 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
GPNMB-210ENST00000478451 LAPTM4BQ86VI4 370 aa9.19□□□□□ -0.94
GPNMB-210ENST00000478451 DDX12PQ92771 950 aa9.19□□□□□ -0.94
GPNMB-210ENST00000478451 TYW1BQ6NUM6 668 aa9.18□□□□□ -0.94
GPNMB-210ENST00000478451 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
GPNMB-210ENST00000478451 ADAM33Q9BZ11 813 aa9.18□□□□□ -0.94
GPNMB-210ENST00000478451 BCAMP50895 628 aa9.17□□□□□ -0.94
GPNMB-210ENST00000478451 FBXW7Q969H0 707 aa9.17□□□□□ -0.94
GPNMB-210ENST00000478451 EPAS1Q99814 870 aa9.17□□□□□ -0.94
GPNMB-210ENST00000478451 V9GY48 417 aaPredicted RBP9.16□□□□□ -0.94
GPNMB-210ENST00000478451 NBR1Q14596 966 aa9.15□□□□□ -0.94
GPNMB-210ENST00000478451 PRKD2Q9BZL6 878 aa9.14□□□□□ -0.95
GPNMB-210ENST00000478451 GRXCR2A6NFK2 248 aa9.13□□□□□ -0.95
GPNMB-210ENST00000478451 SLC24A1O60721 1099 aa9.13□□□□□ -0.95
GPNMB-210ENST00000478451 WBP1LQ9NX94 342 aa9.13□□□□□ -0.95
GPNMB-210ENST00000478451 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
GPNMB-210ENST00000478451 RBM33Q96EV2 1170 aaKnown RBP9.12□□□□□ -0.95
GPNMB-210ENST00000478451 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
GPNMB-210ENST00000478451 ZFRQ96KR1 1074 aaKnown RBP9.1□□□□□ -0.95
GPNMB-210ENST00000478451 MAP3K7O43318 606 aa9.09□□□□□ -0.95
GPNMB-210ENST00000478451 MLLT3P42568 568 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-210ENST00000478451 C6orf132Q5T0Z8 1188 aa9.08□□□□□ -0.96
GPNMB-210ENST00000478451 COL9A1P20849 921 aa9.07□□□□□ -0.96
GPNMB-210ENST00000478451 OSBPP22059 807 aa9.07□□□□□ -0.96
GPNMB-210ENST00000478451 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
GPNMB-210ENST00000478451 ONECUT3O60422 494 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-210ENST00000478451 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
GPNMB-210ENST00000478451 TSR3Q9UJK0 312 aaKnown RBP9.06□□□□□ -0.96
GPNMB-210ENST00000478451 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
GPNMB-210ENST00000478451 SEMA3EO15041 775 aa9.05□□□□□ -0.96
GPNMB-210ENST00000478451 PROX2Q3B8N5 592 aa9.04□□□□□ -0.96
GPNMB-210ENST00000478451 LCE2AQ5TA79 106 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-210ENST00000478451 TREML4Q6UXN2 200 aa9.01□□□□□ -0.97
GPNMB-210ENST00000478451 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
GPNMB-210ENST00000478451 LOC100996750A0A140TA64 210 aa9□□□□□ -0.97
GPNMB-210ENST00000478451 TESPA1A2RU30 521 aaPredicted RBP9□□□□□ -0.97
GPNMB-210ENST00000478451 KRTAP4-6Q9BYQ5 205 aa9□□□□□ -0.97
GPNMB-210ENST00000478451 PPP1R18Q6NYC8 613 aa8.99□□□□□ -0.97
GPNMB-210ENST00000478451 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-210ENST00000478451 KIAA1468Q9P260 1216 aa8.99□□□□□ -0.97
GPNMB-210ENST00000478451 HPS5Q9UPZ3 1129 aa8.99□□□□□ -0.97
GPNMB-210ENST00000478451 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
GPNMB-210ENST00000478451 CERKQ8TCT0 537 aa8.98□□□□□ -0.97
GPNMB-210ENST00000478451 LRCH3Q96II8 777 aa8.98□□□□□ -0.97
GPNMB-210ENST00000478451 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
GPNMB-210ENST00000478451 FAM98CQ17RN3 349 aaKnown RBP8.97□□□□□ -0.97
GPNMB-210ENST00000478451 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.98
GPNMB-210ENST00000478451 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
GPNMB-210ENST00000478451 STK17AQ9UEE5 414 aa8.96□□□□□ -0.98
GPNMB-210ENST00000478451 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
GPNMB-210ENST00000478451 PRSS12P56730 875 aa8.94□□□□□ -0.98
GPNMB-210ENST00000478451 TSKSQ9UJT2 592 aa8.94□□□□□ -0.98
GPNMB-210ENST00000478451 NUTM2FA1L443 756 aa8.93□□□□□ -0.98
GPNMB-210ENST00000478451 IL21Q9HBE4 155 aa8.93□□□□□ -0.98
GPNMB-210ENST00000478451 NPDC1Q9NQX5 325 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-210ENST00000478451 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
GPNMB-210ENST00000478451 RBM26Q5T8P6 1007 aaKnown RBP8.92□□□□□ -0.98
GPNMB-210ENST00000478451 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-210ENST00000478451 DGAT1O75907 488 aa8.91□□□□□ -0.98
GPNMB-210ENST00000478451 MYT1Q01538 1121 aa8.91□□□□□ -0.98
GPNMB-210ENST00000478451 PACS2Q86VP3 889 aa8.91□□□□□ -0.98
GPNMB-210ENST00000478451 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
GPNMB-210ENST00000478451 PPP4CP60510 307 aa8.9□□□□□ -0.98
GPNMB-210ENST00000478451 PTGDRQ13258 359 aa8.9□□□□□ -0.98
GPNMB-210ENST00000478451 PADI6Q6TGC4 694 aa8.9□□□□□ -0.98
GPNMB-210ENST00000478451 POTECB2RU33 542 aa8.88□□□□□ -0.99
GPNMB-210ENST00000478451 NBPF26B4DH59 902 aa8.88□□□□□ -0.99
GPNMB-210ENST00000478451 FCHSD2O94868 740 aa8.88□□□□□ -0.99
GPNMB-210ENST00000478451 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
GPNMB-210ENST00000478451 TTC13Q8NBP0 860 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms