RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
LMBR1-216ENST00000477983 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
LMBR1-216ENST00000477983 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
LMBR1-216ENST00000477983 COL9A1P20849 921 aa12.22□□□□□ -0.45
LMBR1-216ENST00000477983 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
LMBR1-216ENST00000477983 DDX12PQ92771 950 aa12.21□□□□□ -0.45
LMBR1-216ENST00000477983 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
LMBR1-216ENST00000477983 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
LMBR1-216ENST00000477983 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
LMBR1-216ENST00000477983 RABGEF1Q9UJ41 708 aa12.19□□□□□ -0.46
LMBR1-216ENST00000477983 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
LMBR1-216ENST00000477983 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
LMBR1-216ENST00000477983 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
LMBR1-216ENST00000477983 PROX2Q3B8N5 592 aa12.16□□□□□ -0.46
LMBR1-216ENST00000477983 NBR1Q14596 966 aa12.14□□□□□ -0.47
LMBR1-216ENST00000477983 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
LMBR1-216ENST00000477983 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
LMBR1-216ENST00000477983 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
LMBR1-216ENST00000477983 LAPTM4BQ86VI4 370 aa12.1□□□□□ -0.47
LMBR1-216ENST00000477983 WNT2BQ93097 391 aa12.1□□□□□ -0.47
LMBR1-216ENST00000477983 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
LMBR1-216ENST00000477983 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
LMBR1-216ENST00000477983 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
LMBR1-216ENST00000477983 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
LMBR1-216ENST00000477983 MAP3K7O43318 606 aa12.08□□□□□ -0.48
LMBR1-216ENST00000477983 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
LMBR1-216ENST00000477983 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
LMBR1-216ENST00000477983 OSBPP22059 807 aa12.07□□□□□ -0.48
LMBR1-216ENST00000477983 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
LMBR1-216ENST00000477983 PTPN5P54829 565 aa12.06□□□□□ -0.48
LMBR1-216ENST00000477983 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
LMBR1-216ENST00000477983 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
LMBR1-216ENST00000477983 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
LMBR1-216ENST00000477983 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
LMBR1-216ENST00000477983 ANKK1Q8NFD2 765 aa12.01□□□□□ -0.49
LMBR1-216ENST00000477983 ZFRQ96KR1 1074 aaKnown RBP12.01□□□□□ -0.49
LMBR1-216ENST00000477983 PRSS12P56730 875 aa12□□□□□ -0.49
LMBR1-216ENST00000477983 PACS2Q86VP3 889 aa12□□□□□ -0.49
LMBR1-216ENST00000477983 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
LMBR1-216ENST00000477983 CDCA7LQ96GN5 454 aa11.99□□□□□ -0.49
LMBR1-216ENST00000477983 SOWAHBA6NEL2 793 aa11.98□□□□□ -0.49
LMBR1-216ENST00000477983 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
LMBR1-216ENST00000477983 IFFO2Q5TF58 517 aa11.96□□□□□ -0.49
LMBR1-216ENST00000477983 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
LMBR1-216ENST00000477983 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
LMBR1-216ENST00000477983 RBM27Q9P2N5 1060 aaKnown RBP11.95□□□□□ -0.5
LMBR1-216ENST00000477983 BCAMP50895 628 aa11.94□□□□□ -0.5
LMBR1-216ENST00000477983 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
LMBR1-216ENST00000477983 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
LMBR1-216ENST00000477983 MLLT3P42568 568 aaPredicted RBP11.93□□□□□ -0.5
LMBR1-216ENST00000477983 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
LMBR1-216ENST00000477983 TTC13Q8NBP0 860 aa11.91□□□□□ -0.5
LMBR1-216ENST00000477983 TATDN2Q93075 761 aa11.9□□□□□ -0.5
LMBR1-216ENST00000477983 C3orf80F5H4A9 247 aa11.89□□□□□ -0.51
LMBR1-216ENST00000477983 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
LMBR1-216ENST00000477983 LRCH3Q96II8 777 aa11.88□□□□□ -0.51
LMBR1-216ENST00000477983 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
LMBR1-216ENST00000477983 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
LMBR1-216ENST00000477983 SMAPO00193 183 aa11.87□□□□□ -0.51
LMBR1-216ENST00000477983 TSR3Q9UJK0 312 aaKnown RBP11.87□□□□□ -0.51
LMBR1-216ENST00000477983 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
LMBR1-216ENST00000477983 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
LMBR1-216ENST00000477983 NUDT18Q6ZVK8 323 aa11.84□□□□□ -0.51
LMBR1-216ENST00000477983 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
LMBR1-216ENST00000477983 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
LMBR1-216ENST00000477983 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
LMBR1-216ENST00000477983 SEMA3EO15041 775 aa11.81□□□□□ -0.52
LMBR1-216ENST00000477983 PTGDRQ13258 359 aa11.81□□□□□ -0.52
LMBR1-216ENST00000477983 PPP4CP60510 307 aa11.79□□□□□ -0.52
LMBR1-216ENST00000477983 A0A0G2JS52 829 aa11.78□□□□□ -0.52
LMBR1-216ENST00000477983 EYA1Q99502 592 aa11.78□□□□□ -0.52
LMBR1-216ENST00000477983 RGS20O76081 388 aa11.77□□□□□ -0.53
LMBR1-216ENST00000477983 HAP1P54257 671 aaPredicted RBP11.77□□□□□ -0.53
LMBR1-216ENST00000477983 HDGFP51858 240 aaKnown RBP11.76□□□□□ -0.53
LMBR1-216ENST00000477983 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
LMBR1-216ENST00000477983 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
LMBR1-216ENST00000477983 KCNC4Q03721 635 aa11.74□□□□□ -0.53
LMBR1-216ENST00000477983 NUTM2FA1L443 756 aa11.73□□□□□ -0.53
LMBR1-216ENST00000477983 FCHSD2O94868 740 aa11.7□□□□□ -0.54
LMBR1-216ENST00000477983 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
LMBR1-216ENST00000477983 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
LMBR1-216ENST00000477983 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
LMBR1-216ENST00000477983 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
LMBR1-216ENST00000477983 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
LMBR1-216ENST00000477983 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
LMBR1-216ENST00000477983 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
LMBR1-216ENST00000477983 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
LMBR1-216ENST00000477983 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
LMBR1-216ENST00000477983 DNAJB2P25686 324 aa11.64□□□□□ -0.55
LMBR1-216ENST00000477983 APLP1P51693 650 aa11.64□□□□□ -0.55
LMBR1-216ENST00000477983 HIC1Q14526 733 aa11.64□□□□□ -0.55
LMBR1-216ENST00000477983 RNF40O75150 1001 aa11.63□□□□□ -0.55
LMBR1-216ENST00000477983 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
LMBR1-216ENST00000477983 MTRQ99707 1265 aa11.62□□□□□ -0.55
LMBR1-216ENST00000477983 TMEM134Q9H6X4 195 aa11.62□□□□□ -0.55
LMBR1-216ENST00000477983 IL21Q9HBE4 155 aa11.62□□□□□ -0.55
LMBR1-216ENST00000477983 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
LMBR1-216ENST00000477983 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
LMBR1-216ENST00000477983 GPR37O15354 613 aa11.59□□□□□ -0.55
LMBR1-216ENST00000477983 OATP04181 439 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms