RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 INSRP06213 1382 aa18.22■□□□□ 0.51
HLA-DMA-208ENST00000477541 ANP32AP39687 249 aaKnown RBP18.21■□□□□ 0.51
HLA-DMA-208ENST00000477541 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
HLA-DMA-208ENST00000477541 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
HLA-DMA-208ENST00000477541 RALBP1Q15311 655 aa18.19■□□□□ 0.5
HLA-DMA-208ENST00000477541 IPO9Q96P70 1041 aaKnown RBP18.17■□□□□ 0.5
HLA-DMA-208ENST00000477541 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
HLA-DMA-208ENST00000477541 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
HLA-DMA-208ENST00000477541 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
HLA-DMA-208ENST00000477541 PDE3BQ13370 1112 aa18.15■□□□□ 0.5
HLA-DMA-208ENST00000477541 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
HLA-DMA-208ENST00000477541 PTPRGP23470 1445 aa18.15■□□□□ 0.5
HLA-DMA-208ENST00000477541 LAMC1P11047 1609 aa18.15■□□□□ 0.5
HLA-DMA-208ENST00000477541 DEKP35659 375 aaKnown RBP18.15■□□□□ 0.5
HLA-DMA-208ENST00000477541 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.5
HLA-DMA-208ENST00000477541 ARHGEF5Q12774 1597 aa18.14■□□□□ 0.49
HLA-DMA-208ENST00000477541 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
HLA-DMA-208ENST00000477541 FBXO41Q8TF61 875 aa18.14■□□□□ 0.49
HLA-DMA-208ENST00000477541 PKD2Q13563 968 aa18.12■□□□□ 0.49
HLA-DMA-208ENST00000477541 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
HLA-DMA-208ENST00000477541 GLI2P10070 1586 aa18.09■□□□□ 0.49
HLA-DMA-208ENST00000477541 PPRC1Q5VV67 1664 aaKnown RBP18.09■□□□□ 0.49
HLA-DMA-208ENST00000477541 CARMIL2Q6F5E8 1435 aa18.09■□□□□ 0.49
HLA-DMA-208ENST00000477541 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
HLA-DMA-208ENST00000477541 WASHC2CQ9Y4E1 1318 aa18.09■□□□□ 0.49
HLA-DMA-208ENST00000477541 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
HLA-DMA-208ENST00000477541 PLEKHH2Q8IVE3 1493 aa18.08■□□□□ 0.49
HLA-DMA-208ENST00000477541 MS4A1P11836 297 aa18.08■□□□□ 0.48
HLA-DMA-208ENST00000477541 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
HLA-DMA-208ENST00000477541 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
HLA-DMA-208ENST00000477541 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
HLA-DMA-208ENST00000477541 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
HLA-DMA-208ENST00000477541 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
HLA-DMA-208ENST00000477541 ABCA8O94911 1581 aa18.05■□□□□ 0.48
HLA-DMA-208ENST00000477541 NUP155O75694 1391 aa18.05■□□□□ 0.48
HLA-DMA-208ENST00000477541 NLRP13Q86W25 1043 aa18.04■□□□□ 0.48
HLA-DMA-208ENST00000477541 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
HLA-DMA-208ENST00000477541 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
HLA-DMA-208ENST00000477541 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
HLA-DMA-208ENST00000477541 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
HLA-DMA-208ENST00000477541 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.48
HLA-DMA-208ENST00000477541 GPRASP1Q5JY77 1395 aa18.02■□□□□ 0.48
HLA-DMA-208ENST00000477541 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
HLA-DMA-208ENST00000477541 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
HLA-DMA-208ENST00000477541 RCAN3Q9UKA8 241 aa18■□□□□ 0.47
HLA-DMA-208ENST00000477541 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
HLA-DMA-208ENST00000477541 UNC13BO14795 1591 aa17.99■□□□□ 0.47
HLA-DMA-208ENST00000477541 MAST1Q9Y2H9 1570 aa17.99■□□□□ 0.47
HLA-DMA-208ENST00000477541 BLMP54132 1417 aaPredicted RBP17.99■□□□□ 0.47
HLA-DMA-208ENST00000477541 ZNF326Q5BKZ1 582 aaKnown RBP17.98■□□□□ 0.47
HLA-DMA-208ENST00000477541 RSPH4AQ5TD94 716 aa17.98■□□□□ 0.47
HLA-DMA-208ENST00000477541 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
HLA-DMA-208ENST00000477541 PRDM15P57071 1507 aaPredicted RBP17.97■□□□□ 0.47
HLA-DMA-208ENST00000477541 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
HLA-DMA-208ENST00000477541 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
HLA-DMA-208ENST00000477541 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
HLA-DMA-208ENST00000477541 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
HLA-DMA-208ENST00000477541 CCDC141Q6ZP82 1450 aa17.97■□□□□ 0.47
HLA-DMA-208ENST00000477541 ST20-MTHFSA0A0A6YYL1 179 aa17.96■□□□□ 0.47
HLA-DMA-208ENST00000477541 PREX2Q70Z35 1606 aa17.95■□□□□ 0.46
HLA-DMA-208ENST00000477541 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
HLA-DMA-208ENST00000477541 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
HLA-DMA-208ENST00000477541 NBR1Q14596 966 aa17.93■□□□□ 0.46
HLA-DMA-208ENST00000477541 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMA-208ENST00000477541 BACH2Q9BYV9 841 aa17.92■□□□□ 0.46
HLA-DMA-208ENST00000477541 ZNF777Q9ULD5 760 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMA-208ENST00000477541 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
HLA-DMA-208ENST00000477541 UHRF1BP1LA0JNW5 1464 aa17.92■□□□□ 0.46
HLA-DMA-208ENST00000477541 DDRGK1Q96HY6 314 aa17.92■□□□□ 0.46
HLA-DMA-208ENST00000477541 ATP10BO94823 1461 aa17.92■□□□□ 0.46
HLA-DMA-208ENST00000477541 ATP10AO60312 1499 aa17.91■□□□□ 0.46
HLA-DMA-208ENST00000477541 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
HLA-DMA-208ENST00000477541 IQGAP3Q86VI3 1631 aa17.91■□□□□ 0.46
HLA-DMA-208ENST00000477541 PDE4AP27815 886 aa17.9■□□□□ 0.46
HLA-DMA-208ENST00000477541 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
HLA-DMA-208ENST00000477541 EXOC6Q8TAG9 804 aa17.89■□□□□ 0.46
HLA-DMA-208ENST00000477541 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.46
HLA-DMA-208ENST00000477541 MYO5CQ9NQX4 1742 aa17.89■□□□□ 0.45
HLA-DMA-208ENST00000477541 PER1O15534 1290 aaPredicted RBP17.88■□□□□ 0.45
HLA-DMA-208ENST00000477541 SAMD9LQ8IVG5 1584 aa17.88■□□□□ 0.45
HLA-DMA-208ENST00000477541 CDC42BPBQ9Y5S2 1711 aa17.88■□□□□ 0.45
HLA-DMA-208ENST00000477541 LMTK3Q96Q04 1460 aa17.85■□□□□ 0.45
HLA-DMA-208ENST00000477541 A2MP01023 1474 aa17.84■□□□□ 0.45
HLA-DMA-208ENST00000477541 MAGI2Q86UL8 1455 aa17.84■□□□□ 0.45
HLA-DMA-208ENST00000477541 ERBINQ96RT1 1412 aa17.84■□□□□ 0.45
HLA-DMA-208ENST00000477541 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
HLA-DMA-208ENST00000477541 PLA2R1Q13018 1463 aa17.79■□□□□ 0.44
HLA-DMA-208ENST00000477541 DUOX2Q9NRD8 1548 aa17.79■□□□□ 0.44
HLA-DMA-208ENST00000477541 TMF1P82094 1093 aa17.79■□□□□ 0.44
HLA-DMA-208ENST00000477541 CNGB1Q14028 1251 aaPredicted RBP17.79■□□□□ 0.44
HLA-DMA-208ENST00000477541 TESK2Q96S53 571 aa17.79■□□□□ 0.44
HLA-DMA-208ENST00000477541 STAC3Q96MF2 364 aa17.78■□□□□ 0.44
HLA-DMA-208ENST00000477541 SYNMO15061 1565 aa17.78■□□□□ 0.44
HLA-DMA-208ENST00000477541 IQGAP1P46940 1657 aa17.78■□□□□ 0.44
HLA-DMA-208ENST00000477541 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.44
HLA-DMA-208ENST00000477541 CENPQQ7L2Z9 268 aaPredicted RBP17.76■□□□□ 0.43
HLA-DMA-208ENST00000477541 DISP3Q9P2K9 1392 aa17.76■□□□□ 0.43
HLA-DMA-208ENST00000477541 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.75■□□□□ 0.43
HLA-DMA-208ENST00000477541 NPC1L1Q9UHC9 1359 aa17.75■□□□□ 0.43
HLA-DMA-208ENST00000477541 NEFMP07197 916 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms