RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 ZBTB7CA1YPR0 619 aa28.03■■■□□ 2.08
TMEM42-202ENST00000477126 MYH16Q9H6N6 1097 aa28.03■■■□□ 2.08
TMEM42-202ENST00000477126 PANK3Q9H999 370 aa28.03■■■□□ 2.08
TMEM42-202ENST00000477126 TRIM44Q96DX7 344 aaPredicted RBP28.03■■■□□ 2.08
TMEM42-202ENST00000477126 WDR43Q15061 677 aaKnown RBP eCLIP28.02■■■□□ 2.08
TMEM42-202ENST00000477126 PANK1Q8TE04 598 aa28.02■■■□□ 2.08
TMEM42-202ENST00000477126 TBC1D2Q9BYX2 928 aa28.01■■■□□ 2.07
TMEM42-202ENST00000477126 MIA2Q96PC5 1412 aa28.01■■■□□ 2.07
TMEM42-202ENST00000477126 TRAK2O60296 914 aa27.99■■■□□ 2.07
TMEM42-202ENST00000477126 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.99■■■□□ 2.07
TMEM42-202ENST00000477126 FOXD4L1Q9NU39 408 aa27.99■■■□□ 2.07
TMEM42-202ENST00000477126 ESPNB1AK53 854 aa27.98■■■□□ 2.07
TMEM42-202ENST00000477126 NBPF1Q3BBV0 1214 aa27.98■■■□□ 2.07
TMEM42-202ENST00000477126 DUSP27Q5VZP5 1158 aa27.98■■■□□ 2.07
TMEM42-202ENST00000477126 SPINK5Q9NQ38 1064 aaPredicted RBP27.98■■■□□ 2.07
TMEM42-202ENST00000477126 NEUROD2Q15784 382 aa27.98■■■□□ 2.07
TMEM42-202ENST00000477126 MCM4P33991 863 aa27.97■■■□□ 2.07
TMEM42-202ENST00000477126 DNAJC5BQ9UF47 199 aa27.97■■■□□ 2.07
TMEM42-202ENST00000477126 UPF2Q9HAU5 1272 aaKnown RBP27.96■■■□□ 2.07
TMEM42-202ENST00000477126 SNAPC4Q5SXM2 1469 aa27.96■■■□□ 2.07
TMEM42-202ENST00000477126 GOLGA2Q08379 1002 aa27.95■■■□□ 2.06
TMEM42-202ENST00000477126 BCL2L13Q9BXK5 485 aa27.95■■■□□ 2.06
TMEM42-202ENST00000477126 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
TMEM42-202ENST00000477126 ROCK2O75116 1388 aaKnown RBP27.94■■■□□ 2.06
TMEM42-202ENST00000477126 CLUAP1Q96AJ1 413 aa27.93■■■□□ 2.06
TMEM42-202ENST00000477126 PLEKHH1Q9ULM0 1364 aa27.93■■■□□ 2.06
TMEM42-202ENST00000477126 MFAP1P55081 439 aaKnown RBP27.93■■■□□ 2.06
TMEM42-202ENST00000477126 HECW1Q76N89 1606 aa27.92■■■□□ 2.06
TMEM42-202ENST00000477126 MAGI3Q5TCQ9 1506 aa27.91■■■□□ 2.06
TMEM42-202ENST00000477126 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
TMEM42-202ENST00000477126 ANTXR1Q9H6X2 564 aa27.9■■■□□ 2.06
TMEM42-202ENST00000477126 GRPEL1Q9HAV7 217 aa27.9■■■□□ 2.06
TMEM42-202ENST00000477126 FAM13BQ9NYF5 915 aa27.9■■■□□ 2.06
TMEM42-202ENST00000477126 TOPBP1Q92547 1522 aa27.9■■■□□ 2.06
TMEM42-202ENST00000477126 APAF1O14727 1248 aa27.88■■■□□ 2.05
TMEM42-202ENST00000477126 KIAA1211Q6ZU35 1233 aa27.87■■■□□ 2.05
TMEM42-202ENST00000477126 TNNQ9UQP3 1299 aa27.87■■■□□ 2.05
TMEM42-202ENST00000477126 EFCAB5A4FU69 1503 aa27.86■■■□□ 2.05
TMEM42-202ENST00000477126 SUPT6HQ7KZ85 1726 aaKnown RBP27.85■■■□□ 2.05
TMEM42-202ENST00000477126 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
TMEM42-202ENST00000477126 DMRT2Q9Y5R5 561 aa27.84■■■□□ 2.05
TMEM42-202ENST00000477126 DNMBPQ6XZF7 1577 aa27.84■■■□□ 2.05
TMEM42-202ENST00000477126 PER1O15534 1290 aaPredicted RBP27.84■■■□□ 2.05
TMEM42-202ENST00000477126 FSD2A1L4K1 749 aa27.83■■■□□ 2.05
TMEM42-202ENST00000477126 PRDM10Q9NQV6 1147 aa27.83■■■□□ 2.05
TMEM42-202ENST00000477126 CDK13Q14004 1512 aaKnown RBP27.82■■■□□ 2.04
TMEM42-202ENST00000477126 MRE11P49959 708 aa27.82■■■□□ 2.04
TMEM42-202ENST00000477126 GAS2L3Q86XJ1 694 aa27.81■■■□□ 2.04
TMEM42-202ENST00000477126 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
TMEM42-202ENST00000477126 PARD3Q8TEW0 1356 aa27.8■■■□□ 2.04
TMEM42-202ENST00000477126 UGGT2Q9NYU1 1516 aa27.78■■■□□ 2.04
TMEM42-202ENST00000477126 RRP7AQ9Y3A4 280 aaKnown RBP27.77■■■□□ 2.04
TMEM42-202ENST00000477126 NUP155O75694 1391 aa27.77■■■□□ 2.04
TMEM42-202ENST00000477126 CFDP1Q9UEE9 299 aaPredicted RBP27.77■■■□□ 2.04
TMEM42-202ENST00000477126 DAPK1P53355 1430 aa27.76■■■□□ 2.03
TMEM42-202ENST00000477126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.76■■■□□ 2.03
TMEM42-202ENST00000477126 ABCC5O15440 1437 aa27.75■■■□□ 2.03
TMEM42-202ENST00000477126 PDZRN3Q9UPQ7 1066 aa27.74■■■□□ 2.03
TMEM42-202ENST00000477126 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
TMEM42-202ENST00000477126 EHBP1L1Q8N3D4 1523 aa27.74■■■□□ 2.03
TMEM42-202ENST00000477126 LRRIQ1Q96JM4 1722 aa27.73■■■□□ 2.03
TMEM42-202ENST00000477126 R3HCC1Q9Y3T6 440 aaKnown RBP27.73■■■□□ 2.03
TMEM42-202ENST00000477126 SLFN5Q08AF3 891 aa27.73■■■□□ 2.03
TMEM42-202ENST00000477126 TBC1D32Q96NH3 1257 aa27.73■■■□□ 2.03
TMEM42-202ENST00000477126 ZHX1Q9UKY1 873 aaPredicted RBP27.73■■■□□ 2.03
TMEM42-202ENST00000477126 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
TMEM42-202ENST00000477126 KNSTRNQ9Y448 316 aa27.71■■■□□ 2.03
TMEM42-202ENST00000477126 CHMP5Q9NZZ3 219 aa27.71■■■□□ 2.03
TMEM42-202ENST00000477126 KDM5CP41229 1560 aa27.71■■■□□ 2.03
TMEM42-202ENST00000477126 DISP3Q9P2K9 1392 aa27.7■■■□□ 2.02
TMEM42-202ENST00000477126 TNNT2P45379 298 aaPredicted RBP27.7■■■□□ 2.02
TMEM42-202ENST00000477126 PCDHB15Q9Y5E8 787 aa27.7■■■□□ 2.02
TMEM42-202ENST00000477126 NCLP19338 710 aaKnown RBP27.69■■■□□ 2.02
TMEM42-202ENST00000477126 PPP2R1AP30153 589 aa27.69■■■□□ 2.02
TMEM42-202ENST00000477126 GCC2Q8IWJ2 1684 aa27.69■■■□□ 2.02
TMEM42-202ENST00000477126 PZPP20742 1482 aa27.68■■■□□ 2.02
TMEM42-202ENST00000477126 KIAA1107Q9UPP5 1409 aa27.68■■■□□ 2.02
TMEM42-202ENST00000477126 PDCL3Q9H2J4 239 aa27.68■■■□□ 2.02
TMEM42-202ENST00000477126 C22orf23Q9BZE7 217 aa27.67■■■□□ 2.02
TMEM42-202ENST00000477126 MAPK8IP3Q9UPT6 1336 aa27.66■■■□□ 2.02
TMEM42-202ENST00000477126 HSCBQ8IWL3 235 aa27.64■■■□□ 2.01
TMEM42-202ENST00000477126 POLR1AO95602 1720 aaPredicted RBP27.63■■■□□ 2.01
TMEM42-202ENST00000477126 CTTNBP2Q8WZ74 1663 aa27.63■■■□□ 2.01
TMEM42-202ENST00000477126 RLBP1P12271 317 aa27.63■■■□□ 2.01
TMEM42-202ENST00000477126 CENPJQ9HC77 1338 aaPredicted RBP27.62■■■□□ 2.01
TMEM42-202ENST00000477126 MSNP26038 577 aaKnown RBP27.61■■■□□ 2.01
TMEM42-202ENST00000477126 TCOF1Q13428 1488 aaKnown RBP27.6■■■□□ 2.01
TMEM42-202ENST00000477126 XPCQ01831 940 aaPredicted RBP27.6■■■□□ 2.01
TMEM42-202ENST00000477126 BLMP54132 1417 aaPredicted RBP27.59■■■□□ 2.01
TMEM42-202ENST00000477126 TPM2P07951 284 aa27.59■■■□□ 2.01
TMEM42-202ENST00000477126 MPNDQ8N594 471 aa27.59■■■□□ 2.01
TMEM42-202ENST00000477126 TNPO1Q92973 898 aaKnown RBP27.59■■■□□ 2.01
TMEM42-202ENST00000477126 CUL7Q14999 1698 aa27.58■■■□□ 2.01
TMEM42-202ENST00000477126 HSP90AB1P08238 724 aaKnown RBP27.58■■■□□ 2.01
TMEM42-202ENST00000477126 THOC2Q8NI27 1593 aaKnown RBP27.58■■■□□ 2.01
TMEM42-202ENST00000477126 MBD5Q9P267 1494 aa27.57■■■□□ 2
TMEM42-202ENST00000477126 RIPK4P57078 832 aa27.56■■■□□ 2
TMEM42-202ENST00000477126 TMF1P82094 1093 aa27.56■■■□□ 2
TMEM42-202ENST00000477126 ZMYM4Q5VZL5 1548 aa27.56■■■□□ 2
TMEM42-202ENST00000477126 CGNL1Q0VF96 1302 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms